The network for 'ribosomal small subunit biogenesis' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

ribosomal small subunit biogenesis

A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a small ribosomal subunit; includes transport to the sites of protein synthesis.

NameDescriptionProbabilityFunc Analog Organism
zgc:109888zgc:1098880.933
rps15aribosomal protein S15a0.673
ddx18DEAD (Asp-Glu-Ala-Asp) box polypeptide 180.604
wdr75WD repeat domain 750.595
noc3lnucleolar complex associated 3 homolog (S. cerevisiae)0.568
nip7nuclear import 7 homolog (S. cerevisiae)0.560
npm1nucleophosmin 10.553
rps15ribosomal protein S150.552
pespescadillo0.532
rps7ribosomal protein S70.518
ddx27DEAD (Asp-Glu-Ala-Asp) box polypeptide 270.458
bop1block of proliferation 10.450
utp6UTP6, small subunit (SSU) processome component, homolog (yeast)0.439
rpl11ribosomal protein L110.438
rps3ribosomal protein S30.425
rpl10aribosomal protein L10a0.407
rps19ribosomal protein S190.403
zgc:77235zgc:772350.378
rpl23ribosomal protein L230.372
rps5ribosomal protein S50.356
etf1eukaryotic translation termination factor 10.344
prp19PRP19/PSO4 homolog (S. cerevisiae)0.338
rpl14ribosomal protein L140.337
rps12ribosomal protein S120.334
wnt3awingless-type MMTV integration site family, member 3A0.331
rpl7ribosomal protein L70.310
rps23ribosomal protein S230.308
rpl5bribosomal protein L5b0.301
rps10ribosomal protein S100.296
pa2g4aproliferation-associated 2G4, a0.288
rps2ribosomal protein S20.283
zgc:123327zgc:1233270.265
pprc1peroxisome proliferator-activated receptor gamma, coactivator-related 10.257
ruvbl2RuvB-like 2 (E. coli)0.247
rps26ribosomal protein S260.246
rps21ribosomal protein S210.245
zff9zinc finger protein 90.245
rrp1ribosomal RNA processing 1 homolog (S. cerevisiae)0.242
wdr46WD repeat domain 460.239
eif5aeukaryotic translation initiation factor 5A0.227
nhp2NHP2 ribonucleoprotein homolog (yeast)0.224
zgc:92006zgc:920060.221
rpl19ribosomal protein L190.219
zgc:55695zgc:556950.218
mibp2muscle-specific beta 1 integrin binding protein 20.217
rpl15ribosomal protein L150.211
fblfibrillarin0.208
snrpesmall nuclear ribonucleoprotein polypeptide E0.201
polr1apolymerase (RNA) I polypeptide A0.192
med12mediator of RNA polymerase II transcription, subunit 12 homolog0.192
eif4bbeukaryotic translation initiation factor 4Bb0.191
nsun5NOP2/Sun domain family, member 50.186
rps4xribosomal protein S4, X-linked0.176
rps29ribosomal protein S290.171
csnk1dbcasein kinase 1, delta b0.170
rplp0ribosomal protein, large, P00.169
dnttip2deoxynucleotidyltransferase, terminal, interacting protein 20.169
rps24ribosomal protein S240.166
harshistidyl-tRNA synthetase0.149
rpl5aribosomal protein L5a0.146
hint1histidine triad nucleotide binding protein 10.145
polr1epolymerase (RNA) I polypeptide E0.145
rpl36aribosomal protein L36A0.141
rpl24ribosomal protein L240.133
gnl3guanine nucleotide binding protein-like 3 (nucleolar)0.132
rps9ribosomal protein S90.131
tp53tumor protein p530.131
pwp2hPWP2 periodic tryptophan protein homolog (yeast)0.128
LOC560606novel protein similar to human and mouse leishmanolysin-like (metallopeptidase M8 family) (LMLN)0.128
wdr36WD repeat domain 360.122
actn4actinin, alpha 40.121
zgc:92868zgc:928680.121
dcaf13ddb1 and cul4 associated factor 130.120
rpl13ribosomal protein L130.120
sulf2lsulfatase 2, like0.119
wdr12WD repeat domain 120.119
tpt1tumor protein, translationally-controlled 10.118
rpsaribosomal protein SA0.118
marsmethionine-tRNA synthetase0.117
rps25ribosomal protein S250.116
zgc:76988zgc:769880.116
nat10N-acetyltransferase 100.116
rarsarginyl-tRNA synthetase0.114
rps11ribosomal protein S110.112
bms1lBMS1-like, ribosome assembly protein (yeast)0.111
nacanascent polypeptide-associated complex alpha polypeptide0.104
eef1geukaryotic translation elongation factor 1 gamma0.104
rpl7aribosomal protein L7a0.103
eif2s1eukaryotic translation initiation factor 2, subunit 1 alpha0.103
nop14NOP14 nucleolar protein homolog (yeast)0.100
mcmbpminichromosome maintenance complex binding protein0.099
rpl27ribosomal protein L270.098
sarsseryl-tRNA synthetase0.098
fauaFinkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a0.096
mki67ipmki67 (FHA domain) interacting nucleolar phosphoprotein (human)0.094
ddx56DEAD (Asp-Glu-Ala-Asp) box polypeptide 560.092
dohhdeoxyhypusine hydroxylase/monooxygenase0.091
ctpsCTP synthase0.091
ngdnneuroguidin, EIF4E binding protein0.091
zgc:65996zgc:659960.090
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Caenorhabditis elegans
NameDescriptionProbabilityFunc Analog Organism
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Drosophila melanogaster
NameDescriptionProbabilityFunc Analog Organism
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Homo sapiens
NameDescriptionProbabilityFunc Analog Organism
RPS16ribosomal protein S160.957
RPS3ribosomal protein S30.935
WDR3WD repeat domain 30.914
RPS24ribosomal protein S240.882
RPS5ribosomal protein S50.843
NOLC1nucleolar and coiled-body phosphoprotein 10.839
RPS23ribosomal protein S230.812
MKI67IPMKI67 (FHA domain) interacting nucleolar phosphoprotein0.782
CEBPZCCAAT/enhancer binding protein (C/EBP), zeta0.770
POLR1Cpolymerase (RNA) I polypeptide C, 30kDa0.766
EIF3Deukaryotic translation initiation factor 3, subunit D0.765
RPS4Xribosomal protein S4, X-linked0.699
RPS6ribosomal protein S60.699
RPS13ribosomal protein S130.679
PNO1partner of NOB1 homolog (S. cerevisiae)0.583
GNL3guanine nucleotide binding protein-like 3 (nucleolar)0.577
RPS15Aribosomal protein S15a0.561
RPLP1ribosomal protein, large, P10.527
MAK16MAK16 homolog (S. cerevisiae)0.428
WDR43WD repeat domain 430.396
ZC3H15zinc finger CCCH-type containing 150.385
RPS28ribosomal protein S280.384
RPL11ribosomal protein L110.377
G3BP1GTPase activating protein (SH3 domain) binding protein 10.322
RPS25ribosomal protein S250.309
RPS14ribosomal protein S140.301
EIF3Beukaryotic translation initiation factor 3, subunit B0.300
UTP14AUTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)0.290
NOC3Lnucleolar complex associated 3 homolog (S. cerevisiae)0.275
RPS19ribosomal protein S190.261
DDX21DEAD (Asp-Glu-Ala-Asp) box polypeptide 210.260
ESF1ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)0.253
TGS1trimethylguanosine synthase 10.244
DDX18DEAD (Asp-Glu-Ala-Asp) box polypeptide 180.244
CLNS1Achloride channel, nucleotide-sensitive, 1A0.239
RPS8ribosomal protein S80.201
FBLfibrillarin0.164
RPS10ribosomal protein S100.162
RPS15ribosomal protein S150.157
RRS1RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)0.133
UTP3UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)0.132
RPS12ribosomal protein S120.132
DIMT1LDIM1 dimethyladenosine transferase 1-like (S. cerevisiae)0.126
RPS18ribosomal protein S180.121
DIEXFdigestive organ expansion factor homolog (zebrafish)0.119
ABCE1ATP-binding cassette, sub-family E (OABP), member 10.117
RPS7ribosomal protein S70.117
RIOK1RIO kinase 1 (yeast)0.112
NPM1nucleophosmin (nucleolar phosphoprotein B23, numatrin)0.111
RPS2ribosomal protein S20.107
GTPBP4GTP binding protein 40.105
RPS20ribosomal protein S200.102
IPO7importin 70.101
ETF1eukaryotic translation termination factor 10.097
LSM2LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)0.096
RPS17ribosomal protein S170.094
RPS11ribosomal protein S110.092
ZNF593zinc finger protein 5930.091
HEATR1HEAT repeat containing 10.088
MDM2Mdm2 p53 binding protein homolog (mouse)0.088
FTSJ3FtsJ homolog 3 (E. coli)0.082
RPS9ribosomal protein S90.078
RPS3Aribosomal protein S3A0.078
PTRH2peptidyl-tRNA hydrolase 20.078
EIF3Aeukaryotic translation initiation factor 3, subunit A0.077
PITPNBphosphatidylinositol transfer protein, beta0.073
NAA38N(alpha)-acetyltransferase 38, NatC auxiliary subunit0.071
RPL5ribosomal protein L50.070
NUFIP1nuclear fragile X mental retardation protein interacting protein 10.070
UTP15UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)0.070
RPL36ribosomal protein L360.069
C10orf2chromosome 10 open reading frame 20.069
RPF2ribosome production factor 2 homolog (S. cerevisiae)0.069
RPL18ribosomal protein L180.066
CCDC86coiled-coil domain containing 860.063
RRP15ribosomal RNA processing 15 homolog (S. cerevisiae)0.062
NOC4Lnucleolar complex associated 4 homolog (S. cerevisiae)0.061
WDR74WD repeat domain 740.060
RPS27ribosomal protein S270.055
RSL1D1ribosomal L1 domain containing 10.055
MCL1myeloid cell leukemia sequence 1 (BCL2-related)0.055
AMD1adenosylmethionine decarboxylase 10.054
PUS7pseudouridylate synthase 7 homolog (S. cerevisiae)0.054
RPL6ribosomal protein L60.054
SART3squamous cell carcinoma antigen recognized by T cells 30.053
RPSAribosomal protein SA0.049
CIRH1Acirrhosis, autosomal recessive 1A (cirhin)0.047
RPL28ribosomal protein L280.047
PAK1IP1PAK1 interacting protein 10.045
WDR75WD repeat domain 750.041
RPL23Aribosomal protein L23a0.040
EIF5Beukaryotic translation initiation factor 5B0.039
LTV1LTV1 homolog (S. cerevisiae)0.038
DKC1dyskeratosis congenita 1, dyskerin0.037
RRP1Bribosomal RNA processing 1 homolog B (S. cerevisiae)0.033
RG9MTD1RNA (guanine-9-) methyltransferase domain containing 10.032
RPLP0ribosomal protein, large, P00.031
PRPF4PRP4 pre-mRNA processing factor 4 homolog (yeast)0.031
URB2URB2 ribosome biogenesis 2 homolog (S. cerevisiae)0.030
RRP9ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)0.029
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Mus musculus
NameDescriptionProbabilityFunc Analog Organism
Eedembryonic ectoderm development0.935
Tsr1TSR1, 20S rRNA accumulation, homolog (yeast)0.879
Gnl3guanine nucleotide binding protein-like 3 (nucleolar)0.761
Rpgrip1lRpgrip1-like0.545
Ddx21DEAD (Asp-Glu-Ala-Asp) box polypeptide 210.479
Mki67ipMki67 (FHA domain) interacting nucleolar phosphoprotein0.403
Rplp0ribosomal protein, large, P00.397
Cirh1acirrhosis, autosomal recessive 1A (human)0.379
Gtpbp4GTP binding protein 40.334
Wdr43WD repeat domain 430.318
Wdr74WD repeat domain 740.313
Etf1eukaryotic translation termination factor 10.264
CebpzCCAAT/enhancer binding protein zeta0.250
Dnttip2deoxynucleotidyltransferase, terminal, interacting protein 20.231
Npm1nucleophosmin 10.226
Rpl19ribosomal protein L190.218
Rrp15ribosomal RNA processing 15 homolog (S. cerevisiae)0.213
Plrg1pleiotropic regulator 1, PRL1 homolog (Arabidopsis)0.200
Rps3aribosomal protein S3A0.198
Rpl11ribosomal protein L110.198
Mybbp1aMYB binding protein (P160) 1a0.190
Rpl6ribosomal protein L60.182
Eif1aeukaryotic translation initiation factor 1A0.175
Eif5eukaryotic translation initiation factor 50.174
Nop2NOP2 nucleolar protein homolog (yeast)0.173
Polr1bpolymerase (RNA) I polypeptide B0.172
Rplp1ribosomal protein, large, P10.171
Rpl3ribosomal protein L30.163
Eif2s1eukaryotic translation initiation factor 2, subunit 1 alpha0.159
Gm13654predicted gene 136540.158
Zzz3zinc finger, ZZ domain containing 30.149
Rrs1RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)0.144
Rps3ribosomal protein S30.141
Kti12KTI12 homolog, chromatin associated (S. cerevisiae)0.135
Ltv1LTV1 homolog (S. cerevisiae)0.134
Mak16MAK16 homolog (S. cerevisiae)0.112
Rpl4ribosomal protein L40.112
Rpl8ribosomal protein L80.108
Srmspermidine synthase0.105
Dis3DIS3 mitotic control homolog (S. cerevisiae)0.097
Ftsj3FtsJ homolog 3 (E. coli)0.097
Naa15N(alpha)-acetyltransferase 15, NatA auxiliary subunit0.095
Dcaf13DDB1 and CUL4 associated factor 130.094
Grwd1glutamate-rich WD repeat containing 10.087
Rpl12ribosomal protein L120.084
Rpsaribosomal protein SA0.084
Gnb2l1guanine nucleotide binding protein (G protein), beta polypeptide 2 like 10.082
Rps21ribosomal protein S210.080
Tex10testis expressed gene 100.075
Brix1BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)0.074
Rps5ribosomal protein S50.073
Nmd3NMD3 homolog (S. cerevisiae)0.073
Rpl23ribosomal protein L230.066
D19Bwg1357eDNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed0.065
Hnrnpa1heterogeneous nuclear ribonucleoprotein A10.065
Rps15ribosomal protein S150.064
Eef1e1eukaryotic translation elongation factor 1 epsilon 10.064
Per1period homolog 1 (Drosophila)0.062
Fam203afamily with sequence similarity 203, member A0.060
Wdr46WD repeat domain 460.058
Nclnucleolin0.057
Nsun2NOL1/NOP2/Sun domain family member 20.056
Utp20UTP20, small subunit (SSU) processome component, homolog (yeast)0.055
Rpl14ribosomal protein L140.055
Mrps18bmitochondrial ribosomal protein S18B0.054
Srsf7serine/arginine-rich splicing factor 70.053
Rpl7ribosomal protein L70.053
Rsl1d1ribosomal L1 domain containing 10.051
Ddx10DEAD (Asp-Glu-Ala-Asp) box polypeptide 100.050
Sdad1SDA1 domain containing 10.049
Tarsthreonyl-tRNA synthetase0.049
Tbrg4transforming growth factor beta regulated gene 40.047
Eif3aeukaryotic translation initiation factor 3, subunit A0.045
Syncripsynaptotagmin binding, cytoplasmic RNA interacting protein0.045
Ppp2caprotein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform0.045
Nip7nuclear import 7 homolog (S. cerevisiae)0.045
Wdr55WD repeat domain 550.045
Rps7ribosomal protein S70.044
Rarsarginyl-tRNA synthetase0.043
Ccdc86coiled-coil domain containing 860.042
FauFinkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)0.042
Dnajc2DnaJ (Hsp40) homolog, subfamily C, member 20.041
Eif3beukaryotic translation initiation factor 3, subunit B0.041
Fblfibrillarin0.040
Rrp9RRP9, small subunit (SSU) processome component, homolog (yeast)0.038
Nufip1nuclear fragile X mental retardation protein interacting protein 10.037
Wdr3WD repeat domain 30.037
Pwp1PWP1 homolog (S. cerevisiae)0.037
Ppanpeter pan homolog (Drosophila)0.037
Eprsglutamyl-prolyl-tRNA synthetase0.037
Nop56NOP56 ribonucleoprotein homolog (yeast)0.036
Ipo7importin 70.036
Rpl36aribosomal protein L36A0.036
Eef1a1eukaryotic translation elongation factor 1 alpha 10.035
Tra2btransformer 2 beta homolog (Drosophila)0.035
Eef1b2eukaryotic translation elongation factor 1 beta 20.034
Gm10119predicted gene 101190.034
Ddx3xDEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked0.033
Wdr36WD repeat domain 360.033
Pprc1peroxisome proliferative activated receptor, gamma, coactivator-related 10.033
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Rattus norvegicus
NameDescriptionProbabilityFunc Analog Organism
Rplp1ribosomal protein, large, P10.418
Rpl11ribosomal protein L110.383
Gnb2l1guanine nucleotide binding protein (G protein), beta polypeptide 2 like 10.361
Rpsaribosomal protein SA0.157
Rpl8ribosomal protein L80.082
Rps15aribosomal protein S15a0.062
Rplp0ribosomal protein, large, P00.058
Rps3ribosomal protein S30.057
Rps20ribosomal protein S200.054
Rps2ribosomal protein S20.038
Rpl18aribosomal protein L18A0.030
Rpl19ribosomal protein L190.028
Eif5aeukaryotic translation initiation factor 5A0.027
Rpl5ribosomal protein L50.024
Rpl15ribosomal protein L150.022
LOC100362751ribosomal protein P2-like0.021
Rpl6ribosomal protein L60.021
Rps14ribosomal protein S140.020
Rpl27aribosomal protein L27a0.018
LOC688473similar to 40S ribosomal protein S20.016
Rps15ribosomal protein S150.014
Rps8ribosomal protein S80.013
Rps16ribosomal protein S160.013
Rps5ribosomal protein S50.013
Arf1ADP-ribosylation factor 10.012
Rpl4ribosomal protein L40.012
Rpl29ribosomal protein L290.010
Rps27aribosomal protein S27a0.010
Rpl36aribosomal protein L36a0.010
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Saccharomyces cerevisiae
NameDescriptionProbabilityFunc Analog Organism
ENP1Enp1p1.000
KRR1Krr1p1.000
BUD21Bud21p0.998
FAF1Faf1p0.997
BFR2Bfr2p0.996
MPP10Mpp10p0.995
UTP9Utp9p0.990
NOC4Noc4p0.990
NOP1Nop1p0.990
RPS18ARps18ap0.987
NOP14Nop14p0.984
ESF2Esf2p0.979
SLX9Slx9p0.972
RIO2Rio2p0.969
IMP3Imp3p0.968
RPS7ARps7ap0.965
UTP10Utp10p0.964
UTP8Utp8p0.962
BMS1Bms1p0.960
PWP2Pwp2p0.956
UTP4Utp4p0.955
MRD1Mrd1p0.954
UTP25Utp25p0.951
NOB1Nob1p0.943
ENP2Enp2p0.941
UTP6Utp6p0.933
DIP2Dip2p0.926
PNO1Pno1p0.922
UTP18Utp18p0.921
IMP4Imp4p0.917
RPS4ARps4ap0.913
RPS17ARps17ap0.913
UTP7Utp7p0.912
KRE33Kre33p0.910
UTP11Utp11p0.904
RPS17BRps17bp0.897
RPS1BRps1bp0.887
KRI1Kri1p0.881
UTP23Utp23p0.873
RIO1Rio1p0.851
PXR1Pxr1p0.850
RRP9Rrp9p0.846
RPS6BRps6bp0.828
RPS5Rps5p0.824
ECM16Ecm16p0.809
RPS14ARps14ap0.808
DBP8Dbp8p0.795
LTV1Ltv1p0.783
EMG1Emg1p0.766
UTP22Utp22p0.765
RPS9BRps9bp0.759
RRP14Rrp14p0.724
OLA1Ola1p0.707
RPS13Rps13p0.705
TSR1Tsr1p0.693
RPS4BRps4bp0.680
SAS10Sas10p0.674
NAN1Nan1p0.667
TRM112Trm112p0.659
UTP13Utp13p0.639
NOP6Nop6p0.639
UTP15Utp15p0.636
NOC2Noc2p0.623
UTP14Utp14p0.618
ESF1Esf1p0.613
FCF1Fcf1p0.607
RRP36Rrp36p0.597
LCP5Lcp5p0.585
DIM1Dim1p0.578
RPS11BRps11bp0.572
RPS7BRps7bp0.564
NOP56Nop56p0.555
DOM34Dom34p0.552
RRP7Rrp7p0.533
UTP21Utp21p0.533
NOP58Nop58p0.530
ROK1Rok1p0.529
RPS27BRps27bp0.526
NOP8Nop8p0.516
CMS1Cms1p0.510
SOF1Sof1p0.503
RPS10BRps10bp0.481
DRS1Drs1p0.478
RPL12ARpl12ap0.477
ASC1Asc1p0.448
EFG1Efg1p0.442
CDC33Cdc33p0.442
UTP20Utp20p0.411
SUI1Sui1p0.388
FCF2Fcf2p0.383
HIT1Hit1p0.376
RPS21BRps21bp0.372
SRO9Sro9p0.372
RPS16BRps16bp0.372
RPS19BRps19bp0.364
RPS14BRps14bp0.354
YGR054Whypothetical protein0.353
RPS24ARps24ap0.351
RCL1Rcl1p0.351
BCD1Bcd1p0.348