The network for 'rna biosynthetic process' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

rna biosynthetic process

The chemical reactions and pathways resulting in the formation of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. Includes polymerization of ribonucleotide monomers. Refers not only to transcription but also to e.g. viral RNA replication.

NameDescriptionProbabilityFunc Analog Organism
ndr2nodal-related 20.994
snai1asnail homolog 1a (Drosophila)0.991
gli1GLI-Kruppel family member 10.987
tcf7l2transcription factor 7-like 2 (T-cell specific, HMG-box)0.982
fgfr4fibroblast growth factor receptor 40.976
sox9aSRY-box containing gene 9a0.967
lhx1aLIM homeobox 1a0.966
six1bsine oculis homeobox homolog 1b0.960
notch1anotch homolog 1a0.957
mllmyeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)0.952
gata3GATA-binding protein 30.950
tfap2atranscription factor AP-2 alpha0.949
shhasonic hedgehog a0.949
lhx5LIM homeobox 50.947
foxa2forkhead box A20.939
tbx18T-box 180.930
pax8paired box gene 80.930
her7hairy and enhancer of split related-70.923
runx2brunt-related transcription factor 2b0.913
egr1early growth response 10.913
tbx2aT-box gene 2a0.910
six4bsine oculis homeobox homolog 4b0.904
mcm5MCM5 minichromosome maintenance deficient 5 (S. cerevisiae)0.904
pcnaproliferating cell nuclear antigen0.901
kdrlkinase insert domain receptor like0.897
pitx3paired-like homeodomain transcription factor 30.891
snai1bsnail homolog 1b (Drosophila)0.888
foxi1forkhead box I10.887
shhbsonic hedgehog b0.887
spry4sprouty (Drosophila) homolog 40.883
hoxb1bhomeo box B1b0.881
tbx16T-box gene 160.878
bmp2bbone morphogenetic protein 2b0.874
wnt11rwingless-type MMTV integration site family, member 11, related0.872
dlx3bdistal-less homeobox gene 3b0.871
myf5myogenic factor 50.868
klf4Kruppel-like factor 40.867
nav3neuron navigator 30.856
cdx4caudal type homeo box transcription factor 40.855
gbx1gastrulation brain homeobox 10.851
chrna6cholinergic receptor, nicotinic, alpha 60.845
wnt5bwingless-type MMTV integration site family, member 5b0.841
atoh1aatonal homolog 1a0.834
mafbav-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)0.832
pcdh18bprotocadherin 18b0.830
tll1tolloid-like 10.829
fzd7afrizzled homolog 7a0.828
hes6hairy and enhancer of split 6 (Drosophila)0.825
cav1caveolin 10.824
nkx2.2aNK2 transcription factor related 2a0.823
eng2aengrailed 2a0.818
brd4bromodomain containing 40.814
gbx2gastrulation brain homeo box 20.809
six4asine oculis homeobox homolog 4a0.807
dkk1bdickkopf 1b0.805
rx2retinal homeobox gene 20.805
six3asine oculis homeobox homolog 3a0.805
hnf1baHNF1 homeobox Ba0.805
sox1aSRY-box containing gene 1a0.802
sox19aSRY-box containing gene 19a0.801
fn1fibronectin 10.799
whsc1Wolf-Hirschhorn syndrome candidate 10.798
med12mediator of RNA polymerase II transcription, subunit 12 homolog0.798
eomesaeomesodermin homolog a0.795
ephb3aeph receptor B3a0.795
pax6apaired box gene 6a0.794
hand2heart and neural crest derivatives expressed transcript 20.791
axin2axin 2 (conductin, axil)0.791
wnt10awingless-type MMTV integration site family, member 10a0.789
tbx6T-box gene 60.789
ptf1apancreas specific transcription factor, 1a0.786
pou3f2POU class 3 homeobox 20.785
foxa3forkhead box A30.778
raraaretinoic acid receptor, alpha a0.772
smad7MAD, mothers against decapentaplegic homolog 7 (Drosophila)0.771
prox1prospero-related homeobox gene 10.766
irx4biroquois homeobox protein 4b0.765
fezf2FEZ family zinc finger 20.760
nkx2.5NK2 transcription factor related 50.759
hhexhematopoietically expressed homeobox0.751
znf703zinc finger protein 7030.749
rargaretinoic acid receptor gamma a0.738
tbx1T-box 10.732
ntlano tail a0.729
pcdh8protocadherin 80.725
prkciprotein kinase C, iota0.719
nkx2.1bNK2 homeobox 1b0.718
tp53tumor protein p530.716
jag2jagged 20.713
foxb1.2forkhead box B1.20.710
fgf3fibroblast growth factor 30.705
Loading network...
Caenorhabditis elegans
NameDescriptionProbabilityFunc Analog Organism
egl-18Protein EGL-180.998
nhr-49Protein NHR-490.990
egl-13Protein EGL-130.984
hlh-2Protein HLH-20.976
elt-6Protein ELT-60.974
nhr-67Protein NHR-670.905
F39B2.1Protein F39B2.10.882
pha-4Protein PHA-40.878
zip-7Protein ZIP-70.841
egl-46Protein EGL-460.830
vab-3Protein VAB-30.808
fkh-2Protein FKH-20.784
mep-1Protein MEP-10.778
hlh-1Protein HLH-10.762
nhr-2Protein NHR-20.761
mat-3Protein MAT-30.726
lin-36Protein LIN-360.721
his-1Protein HIS-10.718
his-16Protein HIS-160.686
egl-44Protein EGL-440.673
ceh-27Protein CEH-270.667
his-64Protein HIS-640.662
mig-6Protein MIG-60.655
nhr-34Protein NHR-340.644
cam-1Protein CAM-10.641
eya-1Protein EYA-10.638
unc-42Protein UNC-420.631
his-52Protein HIS-520.628
bet-2Protein BET-20.599
hcp-3Protein HCP-30.597
T09B4.5Protein T09B4.50.589
rsp-1Protein RSP-10.587
F40F4.7Protein F40F4.70.583
lin-35Protein LIN-350.572
F08B4.7Protein F08B4.70.570
his-61Protein HIS-610.566
zyg-1Protein ZYG-10.562
his-31Protein HIS-310.557
unc-52Protein UNC-520.555
tbx-8Protein TBX-80.553
F53F10.2Protein F53F10.20.546
pme-3Protein PME-30.541
htz-1Protein HTZ-10.537
bet-1Protein BET-10.536
his-5Protein HIS-50.535
hbl-1Protein HBL-10.529
unc-43Protein UNC-430.520
pes-1Protein PES-10.516
bar-1Protein BAR-10.515
let-502Protein LET-5020.514
mab-5Protein MAB-50.507
hmg-3Protein HMG-30.498
utx-1Protein UTX-10.494
unc-62Protein UNC-620.489
npp-2Protein NPP-20.486
attf-2Protein ATTF-20.484
cnd-1Protein CND-10.481
jmjd-1.2Protein JMJD-1.20.475
gei-4Protein GEI-40.472
soc-2Protein SOC-20.469
F14B8.6Protein F14B8.60.460
qua-1Protein QUA-10.456
unc-37Protein UNC-370.449
unc-85Protein UNC-850.447
plc-1Protein PLC-10.447
rad-26Protein RAD-260.446
pop-1Protein POP-10.440
his-46Protein HIS-460.439
skp-1Protein SKP-10.439
egl-27Protein EGL-270.437
his-50Protein HIS-500.435
ten-1Protein TEN-10.434
hda-1Protein HDA-10.427
H21P03.2Protein H21P03.20.420
sma-9Protein SMA-90.413
ceh-20Protein CEH-200.411
lin-11Protein LIN-110.403
npp-12Protein NPP-120.400
K02D7.1Protein K02D7.10.398
CELE_W03F9.10Protein W03F9.100.398
his-42Protein HIS-420.397
his-47Protein HIS-470.397
daf-14Protein DAF-140.396
flh-2Protein FLH-20.396
mig-5Protein MIG-50.394
cul-1Protein CUL-10.391
D1081.8Protein D1081.80.387
plk-3Protein PLK-30.382
hnd-1Protein HND-10.379
srgp-1Protein SRGP-10.379
ceh-32Protein CEH-320.373
csn-4Protein CSN-40.368
R11A8.7Protein R11A8.70.362
rpb-11Protein RPB-110.360
acs-4Protein ACS-40.358
F13C5.2Protein F13C5.20.356
mls-2Protein MLS-20.355
smc-6Protein SMC-60.354
rgs-7Protein RGS-70.352
ccr-4Protein CCR-40.352
Loading network...
Drosophila melanogaster
NameDescriptionProbabilityFunc Analog Organism
Loading network...
Homo sapiens
NameDescriptionProbabilityFunc Analog Organism
Loading network...
Mus musculus
NameDescriptionProbabilityFunc Analog Organism
Loading network...
Rattus norvegicus
NameDescriptionProbabilityFunc Analog Organism
FosFBJ osteosarcoma oncogene0.963
Junbjun B proto-oncogene0.949
JunJun oncogene0.905
Dusp1dual specificity phosphatase 10.900
Btg2BTG family, member 20.871
Ppp1r15aprotein phosphatase 1, regulatory (inhibitor) subunit 15A0.861
Nr4a1nuclear receptor subfamily 4, group A, member 10.860
Zfp36zinc finger protein 360.856
Tgfbr2transforming growth factor, beta receptor II0.851
Rararetinoic acid receptor, alpha0.838
Tcfe2atranscription factor E2a0.834
Homer1homer homolog 1 (Drosophila)0.833
Fgfr1Fibroblast growth factor receptor 10.761
Tnfrsf1atumor necrosis factor receptor superfamily, member 1a0.709
Atf3activating transcription factor 30.645
Nedd4neural precursor cell expressed, developmentally down-regulated 40.631
Nfibnuclear factor I/B0.617
Icam1intercellular adhesion molecule 10.608
Ifitm3interferon induced transmembrane protein 30.597
Erbb4v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)0.595
Gata6GATA binding protein 60.586
Ier2immediate early response 20.586
DbpD site of albumin promoter (albumin D-box) binding protein0.581
Ubtfupstream binding transcription factor, RNA polymerase I0.579
Strnstriatin, calmodulin binding protein0.572
Hoxc4homeo box C40.572
Nup88nucleoporin 880.568
Rhobras homolog gene family, member B0.555
Nfkbianuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha0.550
Nxf1nuclear RNA export factor 10.549
Smarca4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 40.539
Fgfr2fibroblast growth factor receptor 20.539
Errfi1ERBB receptor feedback inhibitor 10.521
Dlg1discs, large homolog 1 (Drosophila)0.520
Tle4transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)0.511
Lhx5LIM homeobox 50.495
Prkar2aprotein kinase, cAMP dependent regulatory, type II alpha0.487
RestRE1-silencing transcription factor0.487
FgrGardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog0.485
Chrnb3cholinergic receptor, nicotinic, beta 30.467
Sfpqsplicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)0.465
Dll3delta-like 3 (Drosophila)0.463
Socs7suppressor of cytokine signaling 70.462
CebpbCCAAT/enhancer binding protein (C/EBP), beta0.460
Rasa1RAS p21 protein activator (GTPase activating protein) 10.458
Ppardperoxisome proliferator-activated receptor delta0.458
Smu1smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)0.452
Map3k1mitogen activated protein kinase kinase kinase 10.448
Kitv-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog0.447
Nr4a3nuclear receptor subfamily 4, group A, member 30.444
Ptafrplatelet-activating factor receptor0.442
Nr2f6nuclear receptor subfamily 2, group F, member 60.442
Cand1cullin-associated and neddylation-dissociated 10.440
Ywhagtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide0.432
Slc14a1solute carrier family 14 (urea transporter), member 10.429
Casp2caspase 20.428
Jak1Janus kinase 10.427
Stc1stanniocalcin 10.426
Lphn2latrophilin 20.422
Prrx1paired related homeobox 10.418
GperG protein-coupled estrogen receptor 10.418
Nr1d2nuclear receptor subfamily 1, group D, member 20.414
Adora2aadenosine A2a receptor0.410
Psmc1proteasome (prosome, macropain) 26S subunit, ATPase, 10.405
Wbp11WW domain binding protein 110.403
LOC100364212heterogeneous nuclear ribonucleoprotein K-like0.403
Klf6Kruppel-like factor 60.403
Gata4GATA binding protein 40.401
Jak2Janus kinase 20.399
Acvr1activin A receptor, type I0.399
Ptpn6protein tyrosine phosphatase, non-receptor type 60.399
Hand2heart and neural crest derivatives expressed 20.398
Shox2short stature homeobox 20.396
Usf2upstream transcription factor 2, c-fos interacting0.394
Ndst1N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 10.391
Calcrlcalcitonin receptor-like0.389
Mycmyelocytomatosis oncogene0.388
Nr5a1nuclear receptor subfamily 5, group A, member 10.388
Arcactivity-regulated cytoskeleton-associated protein0.383
Ppp1r2protein phosphatase 1, regulatory (inhibitor) subunit 20.382
Mllt1myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10.382
Adra2badrenergic, alpha-2B-, receptor0.381
Clcn5chloride channel 50.371
Hes1hairy and enhancer of split 1 (Drosophila)0.369
Lnpepleucyl/cystinyl aminopeptidase0.369
Mpripmyosin phosphatase Rho interacting protein0.366
Phkg1phosphorylase kinase, gamma 10.365
Snx18sorting nexin 180.364
Prkceprotein kinase C, epsilon0.364
Nfyanuclear transcription factor-Y alpha0.363
Kdm6blysine (K)-specific demethylase 6B0.363
Grk1G protein-coupled receptor kinase 10.362
Metmet proto-oncogene0.360
Ier3immediate early response 30.357
CrebbpCREB binding protein0.355
Nr4a2nuclear receptor subfamily 4, group A, member 20.352
Sbk1SH3-binding domain kinase 10.351
Csrnp1cysteine-serine-rich nuclear protein 10.350
Smad1SMAD family member 10.349
Fam69bfamily with sequence similarity 69, member B0.348
Loading network...
Saccharomyces cerevisiae
NameDescriptionProbabilityFunc Analog Organism