The network for 'spinal cord patterning' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

spinal cord patterning

The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the spinal cord.

NameDescriptionProbabilityFunc Analog Organism
gli1GLI-Kruppel family member 10.899
tbx1T-box 10.656
wnt1wingless-type MMTV integration site family, member 10.532
nkx2.2aNK2 transcription factor related 2a0.406
wnt3awingless-type MMTV integration site family, member 3A0.353
ptch2patched 20.318
shhasonic hedgehog a0.305
wnt4awingless-type MMTV integration site family, member 4a0.278
wnt9bwingless-type MMTV integration site family, member 9B0.204
wnt3wingless-type MMTV integration site family, member 30.187
fgf3fibroblast growth factor 30.176
ascl1aachaete-scute complex-like 1a (Drosophila)0.158
pax2apaired box gene 2a0.149
hoxd4ahomeo box D4a0.147
wnt8bwingless-type MMTV integration site family, member 8b0.141
wnt9awingless-type MMTV integration site family, member 9A0.137
eng2aengrailed 2a0.135
mibmind bomb0.134
hnf1baHNF1 homeobox Ba0.134
ndr2nodal-related 20.130
sulf1sulfatase 10.100
bmp2abone morphogenetic protein 2a0.080
wnt2wingless-type MMTV integration site family member 20.079
dbx1adeveloping brain homeobox 1a0.077
epha4beph receptor A4b0.076
pdlim7PDZ and LIM domain 70.064
lmx1b.1LIM homeobox transcription factor 1, beta 10.060
epb41l5erythrocyte membrane protein band 4.1 like 50.057
tp53tumor protein p530.055
wnt10bwingless-type MMTV integration site family, member 10b0.050
olig3oligodendrocyte transcription factor 30.049
fgf8afibroblast growth factor 8 a0.043
wnt2bbwingless-type MMTV integration site family, member 2Bb0.042
rspo3R-spondin 3 homolog (Xenopus laevis)0.041
otx1borthodenticle homolog 1b0.040
edn1endothelin 10.040
zbtb4zinc finger and BTB domain containing 40.039
sulf2sulfatase 20.038
wnt4bwingless-type MMTV integration site family, member 4b0.036
jag1bjagged 1b0.035
her5hairy-related 50.035
wnt10awingless-type MMTV integration site family, member 10a0.035
sox4bSRY-box containing gene 4b0.034
arhgef7bRho guanine nucleotide exchange factor (GEF) 7b0.033
pcdh18aprotocadherin 18a0.033
foxp2forkhead box P20.032
dkk1bdickkopf 1b0.032
apcadenomatosis polyposis coli0.031
nkx6.1NK6 transcription factor related, locus 1 (Drosophila)0.031
ascl1bachaete-scute complex-like 1b (Drosophila)0.031
atoh1aatonal homolog 1a0.030
robo3roundabout homolog 30.027
cdx4caudal type homeo box transcription factor 40.027
med12mediator of RNA polymerase II transcription, subunit 12 homolog0.026
zfyve26zinc finger, FYVE domain containing 260.026
wnt7bawingless-type MMTV integration site family, member 7Ba0.026
lef1lymphocyte enhancer binding factor 10.026
sox11bSRY-box containing gene 11b0.025
fgfr1bfibroblast growth factor receptor 1b0.025
wnt7bbwingless-type MMTV integration site family, member 7Bb0.025
pcdh18bprotocadherin 18b0.025
msxcmuscle segment homeobox C0.024
notch1anotch homolog 1a0.023
wnt16wingless-type MMTV integration site family, member 160.023
ptch1patched 10.023
ahctf1AT hook containing transcription factor 10.022
sfrp5secreted frizzled-related protein 50.022
rereaarginine-glutamic acid dipeptide (RE) repeats a0.022
fzd5frizzled homolog 50.022
lhx2bLIM homeobox 2b0.021
foxd3forkhead box D30.021
hoxa2bhomeo box A2b0.020
meis2.2myeloid ecotropic viral integration site 2.20.020
wnt5bwingless-type MMTV integration site family, member 5b0.020
hoxb2ahomeo box B2a0.020
fezf2FEZ family zinc finger 20.020
nr2e1nuclear receptor subfamily 2, group E, member 10.019
wnt7aawingless-type MMTV integration site family, member 7Aa0.019
dccdeleted in colorectal carcinoma0.018
ext2exostoses (multiple) 20.018
eya1eyes absent homolog 10.018
scube2signal peptide, CUB domain, EGF-like 20.017
fbn2bfibrillin 2b0.017
lzts2aleucine zipper, putative tumor suppressor 2a0.017
tcf7l2transcription factor 7-like 2 (T-cell specific, HMG-box)0.017
gli2aGLI-Kruppel family member GLI2a0.017
ihhaIndian hedgehog homolog a0.016
sfrp1bsecreted frizzled-related protein 1b0.016
dab1bdisabled homolog 1b (Drosophila)0.016
gja3gap junction protein, alpha 30.016
ntlano tail a0.016
pwp2hPWP2 periodic tryptophan protein homolog (yeast)0.016
foxb1.2forkhead box B1.20.015
hmx4H6 family homeobox 40.015
lratblecithin retinol acyltransferase b (phosphatidylcholine--retinol O-acyltransferase b)0.015
map2k4amitogen-activated protein kinase kinase 4a0.015
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Caenorhabditis elegans
NameDescriptionProbabilityFunc Analog Organism
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Drosophila melanogaster
NameDescriptionProbabilityFunc Analog Organism
HLHm7E(spl) region transcript m70.618
cicubitus interruptus0.516
amosabsent MD neurons and olfactory sensilla0.286
E(spl)Enhancer of split0.241
HLHmgammaE(spl) region transcript mgamma0.179
18w18 wheeler0.128
HLHmbetaE(spl) region transcript mbeta0.121
m4E(spl) region transcript m40.114
NotumCG13076 gene product from transcript CG13076-RB0.105
HLHm5E(spl) region transcript m50.086
m2E(spl) region transcript m20.079
malphaE(spl) region transcript malpha0.078
EgfrEpidermal growth factor receptor0.076
HLHmdeltaE(spl) region transcript mdelta0.074
TomTwin of m40.064
RhoGAPp190CG32555 gene product from transcript CG32555-RB0.064
eyaeyes absent0.059
CG11093CG11093 gene product from transcript CG11093-RB0.042
mwhmultiple wing hairs0.041
dandistal antenna0.040
CG17273CG17273 gene product from transcript CG17273-RA0.039
Cdk4Cyclin-dependent kinase 40.035
towtarget of wingless0.033
argosCG4531 gene product from transcript CG4531-RA0.033
HLHm3E(spl) region transcript m30.026
netCG11450 gene product from transcript CG11450-RB0.025
BobABrother of Bearded A0.023
CG6490CG6490 gene product from transcript CG6490-RB0.021
m6E(spl) region transcript m60.021
WnkCG7177 gene product from transcript CG7177-RA0.021
Klp64DKinesin-like protein at 64D0.021
Pka-C1cAMP-dependent protein kinase 10.019
pashapartner of drosha0.019
StimStromal interaction molecule0.019
nkdnaked cuticle0.018
stumpsCG31317 gene product from transcript CG31317-RC0.017
bbgbig bang0.017
PvrPDGF- and VEGF-receptor related0.017
Myo31DFMyosin 31DF0.017
RN-tretre oncogene-related protein0.017
Bre1CG10542 gene product from transcript CG10542-RA0.016
rempAreduced mechanoreceptor potential A0.016
par-1CG8201 gene product from transcript CG8201-RA0.016
G-oalpha47AG protein oalpha 47A0.015
kermitCG11546 gene product from transcript CG11546-RB0.015
Hr39Hormone receptor-like in 390.015
Rab2Rab-protein 20.014
CG12026CG12026 gene product from transcript CG12026-RB0.014
Wnt4Wnt oncogene analog 40.014
salmspalt major0.013
tilBtouch insensitive larva B0.013
sosine oculis0.013
CG5830CG5830 gene product from transcript CG5830-RA0.013
rumiCG31152 gene product from transcript CG31152-RA0.012
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Homo sapiens
NameDescriptionProbabilityFunc Analog Organism
NOTCH1notch 10.975
NOTCH3notch 30.799
GLI1GLI family zinc finger 10.705
SUFUsuppressor of fused homolog (Drosophila)0.557
RCN3reticulocalbin 3, EF-hand calcium binding domain0.522
PEX26peroxisomal biogenesis factor 260.316
MID1IP1MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))0.283
STK36serine/threonine kinase 360.282
GLIS3GLIS family zinc finger 30.164
QPRTquinolinate phosphoribosyltransferase0.115
ZNF764zinc finger protein 7640.095
BMP1bone morphogenetic protein 10.069
NOTCH2notch 20.065
VHLvon Hippel-Lindau tumor suppressor0.058
GFI1Bgrowth factor independent 1B transcription repressor0.049
ZNF263zinc finger protein 2630.045
SKIv-ski sarcoma viral oncogene homolog (avian)0.033
TRIP6thyroid hormone receptor interactor 60.022
ZIC1Zic family member 1 (odd-paired homolog, Drosophila)0.022
JAG2jagged 20.022
TCF4transcription factor 40.022
GLI3GLI family zinc finger 30.020
LMX1ALIM homeobox transcription factor 1, alpha0.020
KRTAP4-12keratin associated protein 4-120.019
SMAD3SMAD family member 30.019
LBX1ladybird homeobox 10.018
EGFL7EGF-like-domain, multiple 70.013
RUNX1T1runt-related transcription factor 1; translocated to, 1 (cyclin D-related)0.013
NEUROD1neurogenic differentiation 10.012
LHX2LIM homeobox 20.012
LTBP4latent transforming growth factor beta binding protein 40.012
BHLHE23basic helix-loop-helix family, member e230.012
MEGF11multiple EGF-like-domains 110.012
FBLN1fibulin 10.011
IPO13importin 130.011
PDX1pancreatic and duodenal homeobox 10.011
ISL1ISL LIM homeobox 10.011
FEVFEV (ETS oncogene family)0.011
CAV2caveolin 20.011
RBPJrecombination signal binding protein for immunoglobulin kappa J region0.010
NEDD9neural precursor cell expressed, developmentally down-regulated 90.010
HRGhistidine-rich glycoprotein0.010
SLC6A3solute carrier family 6 (neurotransmitter transporter, dopamine), member 30.010
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Mus musculus
NameDescriptionProbabilityFunc Analog Organism
Shhsonic hedgehog1.000
Pitx2paired-like homeodomain transcription factor 20.994
Otx2orthodenticle homolog 2 (Drosophila)0.980
Msx1homeobox, msh-like 10.968
Gli3GLI-Kruppel family member GLI30.965
Hoxd3homeobox D30.954
Tcfap2atranscription factor AP-2, alpha0.951
Foxc1forkhead box C10.938
Fgfr2fibroblast growth factor receptor 20.934
Emx1empty spiracles homolog 1 (Drosophila)0.889
Pax6paired box gene 60.879
Hand1heart and neural crest derivatives expressed transcript 10.854
Gli2GLI-Kruppel family member GLI20.844
Rarbretinoic acid receptor, beta0.823
Rargretinoic acid receptor, gamma0.817
Foxc2forkhead box C20.763
Fgf8fibroblast growth factor 80.745
Sox9SRY-box containing gene 90.745
Bmp7bone morphogenetic protein 70.732
Insm1insulinoma-associated 10.729
Isl1ISL1 transcription factor, LIM/homeodomain0.714
Lef1lymphoid enhancer binding factor 10.693
Retret proto-oncogene0.652
Pax3paired box gene 30.619
Gscgoosecoid homeobox0.610
Hand2heart and neural crest derivatives expressed transcript 20.601
Pax2paired box gene 20.592
Phox2bpaired-like homeobox 2b0.590
Tbx1T-box 10.572
Bmp4bone morphogenetic protein 40.569
Msx2homeobox, msh-like 20.560
Nkx2-2NK2 transcription factor related, locus 2 (Drosophila)0.557
Emx2empty spiracles homolog 2 (Drosophila)0.526
Hoxd11homeobox D110.469
Nkx3-2NK3 homeobox 20.466
Hoxd13homeobox D130.422
Sox3SRY-box containing gene 30.407
Nkx6-1NK6 homeobox 10.402
Col2a1collagen, type II, alpha 10.389
Cdk5r1cyclin-dependent kinase 5, regulatory subunit 1 (p35)0.359
Twist2twist homolog 2 (Drosophila)0.324
Rararetinoic acid receptor, alpha0.310
Neurog3neurogenin 30.304
Igdcc3immunoglobulin superfamily, DCC subclass, member 30.294
Ascl1achaete-scute complex homolog 1 (Drosophila)0.280
Fgf10fibroblast growth factor 100.260
Lhx3LIM homeobox protein 30.245
Pax7paired box gene 70.242
Pdx1pancreatic and duodenal homeobox 10.231
Tbx3T-box 30.230
Ptf1apancreas specific transcription factor, 1a0.230
Six3sine oculis-related homeobox 3 homolog (Drosophila)0.219
Aceangiotensin I converting enzyme (peptidyl-dipeptidase A) 10.217
Nkx2-5NK2 transcription factor related, locus 5 (Drosophila)0.209
Hoxa1homeobox A10.207
Onecut1one cut domain, family member 10.193
Phox2apaired-like homeobox 2a0.192
Ror2receptor tyrosine kinase-like orphan receptor 20.179
Gdf11growth differentiation factor 110.171
Gdnfglial cell line derived neurotrophic factor0.167
Sox11SRY-box containing gene 110.166
Lmx1bLIM homeobox transcription factor 1 beta0.163
Pax9paired box gene 90.163
Mycnv-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)0.157
Gpr27G protein-coupled receptor 270.146
Hoxa13homeobox A130.146
Nhlh1nescient helix loop helix 10.141
Nr5a1nuclear receptor subfamily 5, group A, member 10.140
Pitx1paired-like homeodomain transcription factor 10.138
Zic2zinc finger protein of the cerebellum 20.135
Foxh1forkhead box H10.117
Socs1suppressor of cytokine signaling 10.112
Neurod1neurogenic differentiation 10.111
Lhx4LIM homeobox protein 40.111
Foxe3forkhead box E30.110
Megf8multiple EGF-like-domains 80.109
Evx2even skipped homeotic gene 2 homolog0.109
Irs4insulin receptor substrate 40.108
Cdoncell adhesion molecule-related/down-regulated by oncogenes0.107
En1engrailed 10.102
Hmx1H6 homeobox 10.100
Vax1ventral anterior homeobox containing gene 10.099
Hoxb1homeobox B10.094
BmperBMP-binding endothelial regulator0.094
Fgf9fibroblast growth factor 90.094
Sema5bsema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B0.093
Wfikkn2WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 20.093
Tlx2T-cell leukemia, homeobox 20.092
Neurog2neurogenin 20.091
Eya1eyes absent 1 homolog (Drosophila)0.090
Foxd2forkhead box D20.089
Hoxa5homeobox A50.088
Sox4SRY-box containing gene 40.087
Hoxb4homeobox B40.086
Hoxa11homeobox A110.086
Lmx1aLIM homeobox transcription factor 1 alpha0.085
Lgr4leucine-rich repeat-containing G protein-coupled receptor 40.084
Mesp1mesoderm posterior 10.083
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Rattus norvegicus
NameDescriptionProbabilityFunc Analog Organism
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Saccharomyces cerevisiae
NameDescriptionProbabilityFunc Analog Organism