Saccharomyces cerevisiae

53 known processes

RIM4 (YHL024W)

Rim4p

RIM4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
meiotic cell cycle GO:0051321 272 0.967
organelle fission GO:0048285 272 0.835
nuclear division GO:0000280 263 0.805
meiotic nuclear division GO:0007126 163 0.516
regulation of nuclear division GO:0051783 103 0.494
regulation of cell division GO:0051302 113 0.463
cell wall organization or biogenesis GO:0071554 190 0.442
ion transport GO:0006811 274 0.412
developmental process involved in reproduction GO:0003006 159 0.356
regulation of meiosis GO:0040020 42 0.341
regulation of meiotic cell cycle GO:0051445 43 0.312
response to chemical GO:0042221 390 0.307
regulation of cellular component organization GO:0051128 334 0.260
developmental process GO:0032502 261 0.258
anatomical structure development GO:0048856 160 0.254
microtubule based process GO:0007017 117 0.229
carboxylic acid transport GO:0046942 74 0.224
single organism developmental process GO:0044767 258 0.216
regulation of organelle organization GO:0033043 243 0.212
anatomical structure formation involved in morphogenesis GO:0048646 136 0.202
cell division GO:0051301 205 0.201
anion transport GO:0006820 145 0.200
regulation of cell cycle process GO:0010564 150 0.186
cytoskeleton organization GO:0007010 230 0.173
cellular response to chemical stimulus GO:0070887 315 0.166
reproductive process in single celled organism GO:0022413 145 0.152
microtubule cytoskeleton organization GO:0000226 109 0.148
regulation of cell cycle GO:0051726 195 0.141
protein phosphorylation GO:0006468 197 0.134
sexual reproduction GO:0019953 216 0.132
organelle assembly GO:0070925 118 0.131
organic acid transport GO:0015849 77 0.118
cellular developmental process GO:0048869 191 0.116
cell wall organization GO:0071555 146 0.114
cell communication GO:0007154 345 0.109
growth GO:0040007 157 0.109
fungal type cell wall organization GO:0031505 145 0.102
cell development GO:0048468 107 0.101
cellular response to oxidative stress GO:0034599 94 0.098
single organism carbohydrate metabolic process GO:0044723 237 0.098
positive regulation of organelle organization GO:0010638 85 0.097
mitochondrion organization GO:0007005 261 0.097
phosphorylation GO:0016310 291 0.094
chemical homeostasis GO:0048878 137 0.094
sexual sporulation GO:0034293 113 0.091
fungal type cell wall biogenesis GO:0009272 80 0.086
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.084
organic acid metabolic process GO:0006082 352 0.083
negative regulation of organelle organization GO:0010639 103 0.082
single organism reproductive process GO:0044702 159 0.082
cellular protein complex assembly GO:0043623 209 0.081
carboxylic acid metabolic process GO:0019752 338 0.081
sexual sporulation resulting in formation of a cellular spore GO:0043935 113 0.081
single organism catabolic process GO:0044712 619 0.079
regulation of biological quality GO:0065008 391 0.077
vesicle mediated transport GO:0016192 335 0.077
anatomical structure morphogenesis GO:0009653 160 0.077
positive regulation of cellular component organization GO:0051130 116 0.076
organic anion transport GO:0015711 114 0.076
response to temperature stimulus GO:0009266 74 0.074
regulation of transport GO:0051049 85 0.073
response to external stimulus GO:0009605 158 0.073
fungal type cell wall organization or biogenesis GO:0071852 169 0.071
single organism signaling GO:0044700 208 0.067
regulation of localization GO:0032879 127 0.067
positive regulation of nucleic acid templated transcription GO:1903508 286 0.066
filamentous growth GO:0030447 124 0.066
response to extracellular stimulus GO:0009991 156 0.065
homeostatic process GO:0042592 227 0.064
oxoacid metabolic process GO:0043436 351 0.064
cellular response to dna damage stimulus GO:0006974 287 0.064
sporulation GO:0043934 132 0.063
glucose metabolic process GO:0006006 65 0.063
negative regulation of cell cycle GO:0045786 91 0.063
external encapsulating structure organization GO:0045229 146 0.062
ascospore formation GO:0030437 107 0.062
protein complex biogenesis GO:0070271 314 0.062
meiosis i GO:0007127 92 0.062
regulation of catalytic activity GO:0050790 307 0.062
regulation of phosphate metabolic process GO:0019220 230 0.059
response to nutrient levels GO:0031667 150 0.059
positive regulation of cellular biosynthetic process GO:0031328 336 0.058
nucleobase containing small molecule metabolic process GO:0055086 491 0.055
invasive growth in response to glucose limitation GO:0001403 61 0.053
establishment of protein localization GO:0045184 367 0.053
regulation of cellular ketone metabolic process GO:0010565 42 0.053
response to abiotic stimulus GO:0009628 159 0.052
multi organism reproductive process GO:0044703 216 0.051
nitrogen compound transport GO:0071705 212 0.050
regulation of molecular function GO:0065009 320 0.050
macromolecule catabolic process GO:0009057 383 0.050
cellular component morphogenesis GO:0032989 97 0.049
response to heat GO:0009408 69 0.049
reproductive process GO:0022414 248 0.049
sporulation resulting in formation of a cellular spore GO:0030435 129 0.048
regulation of protein metabolic process GO:0051246 237 0.047
dna repair GO:0006281 236 0.046
cellular nitrogen compound catabolic process GO:0044270 494 0.045
regulation of cellular carbohydrate metabolic process GO:0010675 41 0.045
regulation of protein modification process GO:0031399 110 0.044
carbohydrate metabolic process GO:0005975 252 0.043
cellular response to heat GO:0034605 53 0.043
response to osmotic stress GO:0006970 83 0.042
signal transduction GO:0007165 208 0.041
regulation of cellular component size GO:0032535 50 0.040
regulation of protein localization GO:0032880 62 0.040
mitotic nuclear division GO:0007067 131 0.040
cellular response to external stimulus GO:0071496 150 0.040
regulation of mitosis GO:0007088 65 0.039
mitotic cell cycle process GO:1903047 294 0.039
nucleotide metabolic process GO:0009117 453 0.039
plasma membrane selenite transport GO:0097080 3 0.037
organic hydroxy compound metabolic process GO:1901615 125 0.037
chromosome segregation GO:0007059 159 0.037
growth of unicellular organism as a thread of attached cells GO:0070783 105 0.036
single organism membrane organization GO:0044802 275 0.036
response to carbohydrate GO:0009743 14 0.036
response to nutrient GO:0007584 52 0.036
monosaccharide metabolic process GO:0005996 83 0.036
regulation of cellular localization GO:0060341 50 0.035
positive regulation of macromolecule metabolic process GO:0010604 394 0.035
chromatin organization GO:0006325 242 0.035
anion transmembrane transport GO:0098656 79 0.035
cellular response to organic substance GO:0071310 159 0.035
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.034
negative regulation of cellular component organization GO:0051129 109 0.034
cell wall biogenesis GO:0042546 93 0.034
response to organic substance GO:0010033 182 0.033
cation transport GO:0006812 166 0.033
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.033
regulation of cytoskeleton organization GO:0051493 63 0.033
single organism cellular localization GO:1902580 375 0.032
organic hydroxy compound transport GO:0015850 41 0.032
pseudohyphal growth GO:0007124 75 0.032
signaling GO:0023052 208 0.031
negative regulation of nuclear division GO:0051784 62 0.031
meiotic cell cycle process GO:1903046 229 0.031
regulation of glucose metabolic process GO:0010906 27 0.030
protein ubiquitination GO:0016567 118 0.030
sister chromatid segregation GO:0000819 93 0.030
regulation of anatomical structure size GO:0090066 50 0.030
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.030
filamentous growth of a population of unicellular organisms GO:0044182 109 0.030
organonitrogen compound biosynthetic process GO:1901566 314 0.030
regulation of response to stimulus GO:0048583 157 0.029
reciprocal meiotic recombination GO:0007131 54 0.029
carbohydrate transport GO:0008643 33 0.029
aging GO:0007568 71 0.029
mitotic sister chromatid segregation GO:0000070 85 0.029
nucleoside phosphate metabolic process GO:0006753 458 0.029
response to reactive oxygen species GO:0000302 22 0.028
organic hydroxy compound biosynthetic process GO:1901617 81 0.028
chromatin modification GO:0016568 200 0.028
ion transmembrane transport GO:0034220 200 0.028
mrna metabolic process GO:0016071 269 0.027
Yeast
nucleoside metabolic process GO:0009116 394 0.026
cell aging GO:0007569 70 0.026
ribonucleoprotein complex subunit organization GO:0071826 152 0.026
positive regulation of cellular protein metabolic process GO:0032270 89 0.025
response to glucose GO:0009749 13 0.025
positive regulation of transcription from rna polymerase ii promoter in response to oxidative stress GO:0036091 3 0.025
dna recombination GO:0006310 172 0.025
cellular ion homeostasis GO:0006873 112 0.025
regulation of chromosome organization GO:0033044 66 0.025
purine nucleoside triphosphate metabolic process GO:0009144 356 0.024
carbohydrate biosynthetic process GO:0016051 82 0.024
regulation of phosphorus metabolic process GO:0051174 230 0.024
positive regulation of cell cycle process GO:0090068 31 0.024
cell differentiation GO:0030154 161 0.023
purine nucleotide metabolic process GO:0006163 376 0.023
cellular ketone metabolic process GO:0042180 63 0.023
positive regulation of rna biosynthetic process GO:1902680 286 0.023
positive regulation of biosynthetic process GO:0009891 336 0.023
reproduction of a single celled organism GO:0032505 191 0.023
carbon catabolite activation of transcription GO:0045991 26 0.023
ribonucleoside triphosphate metabolic process GO:0009199 356 0.023
regulation of catabolic process GO:0009894 199 0.023
regulation of proteasomal ubiquitin dependent protein catabolic process GO:0032434 30 0.023
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.023
negative regulation of filamentous growth GO:0060258 13 0.022
response to oxygen containing compound GO:1901700 61 0.022
positive regulation of cell cycle GO:0045787 32 0.022
invasive filamentous growth GO:0036267 65 0.022
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.022
carbon catabolite activation of transcription from rna polymerase ii promoter GO:0000436 22 0.022
nucleobase containing compound catabolic process GO:0034655 479 0.021
regulation of filamentous growth GO:0010570 38 0.021
purine ribonucleotide metabolic process GO:0009150 372 0.021
response to oxidative stress GO:0006979 99 0.021
ribonucleotide metabolic process GO:0009259 377 0.021
cellular macromolecule catabolic process GO:0044265 363 0.021
establishment of organelle localization GO:0051656 96 0.021
cellular response to nutrient levels GO:0031669 144 0.021
cellular response to oxygen containing compound GO:1901701 43 0.021
protein complex assembly GO:0006461 302 0.021
multi organism process GO:0051704 233 0.021
single organism carbohydrate catabolic process GO:0044724 73 0.021
carbohydrate derivative metabolic process GO:1901135 549 0.021
organelle localization GO:0051640 128 0.020
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.020
positive regulation of protein modification process GO:0031401 49 0.020
negative regulation of growth of unicellular organism as a thread of attached cells GO:0070785 11 0.020
hexose metabolic process GO:0019318 78 0.020
positive regulation of transcription dna templated GO:0045893 286 0.019
positive regulation of intracellular transport GO:0032388 4 0.019
cellular chemical homeostasis GO:0055082 123 0.019
chromatin remodeling GO:0006338 80 0.019
response to starvation GO:0042594 96 0.019
cellular homeostasis GO:0019725 138 0.019
positive regulation of molecular function GO:0044093 185 0.019
cytokinesis GO:0000910 92 0.019
cation homeostasis GO:0055080 105 0.019
purine nucleoside metabolic process GO:0042278 380 0.019
regulation of signaling GO:0023051 119 0.018
regulation of cellular catabolic process GO:0031329 195 0.018
organonitrogen compound catabolic process GO:1901565 404 0.018
ribonucleoside metabolic process GO:0009119 389 0.018
lipid localization GO:0010876 60 0.018
detection of carbohydrate stimulus GO:0009730 3 0.018
regulation of cellular ketone metabolic process by regulation of transcription from rna polymerase ii promoter GO:0072364 12 0.018
negative regulation of cell cycle process GO:0010948 86 0.018
detection of hexose stimulus GO:0009732 3 0.018
steroid metabolic process GO:0008202 47 0.018
negative regulation of cell division GO:0051782 66 0.018
monosaccharide biosynthetic process GO:0046364 31 0.018
establishment of protein localization to membrane GO:0090150 99 0.017
sterol metabolic process GO:0016125 47 0.017
positive regulation of catalytic activity GO:0043085 178 0.017
nucleoside monophosphate metabolic process GO:0009123 267 0.017
multi organism cellular process GO:0044764 120 0.017
modification dependent protein catabolic process GO:0019941 181 0.017
regulation of carbohydrate metabolic process GO:0006109 43 0.017
aromatic compound catabolic process GO:0019439 491 0.016
organophosphate metabolic process GO:0019637 597 0.016
positive regulation of rna metabolic process GO:0051254 294 0.016
amino acid transport GO:0006865 45 0.016
detection of stimulus GO:0051606 4 0.016
small molecule biosynthetic process GO:0044283 258 0.016
regulation of gluconeogenesis GO:0006111 16 0.016
reactive oxygen species metabolic process GO:0072593 10 0.016
gene silencing GO:0016458 151 0.015
purine ribonucleoside catabolic process GO:0046130 330 0.015
regulation of vesicle mediated transport GO:0060627 39 0.015
conjugation GO:0000746 107 0.015
positive regulation of fatty acid beta oxidation by positive regulation of transcription from rna polymerase ii promoter GO:0097235 1 0.015
mitotic cell cycle GO:0000278 306 0.015
positive regulation of gene expression GO:0010628 321 0.015
fungal type cell wall assembly GO:0071940 53 0.015
peptidyl lysine modification GO:0018205 77 0.015
positive regulation of transferase activity GO:0051347 28 0.015
regulation of cell size GO:0008361 30 0.015
cellular carbohydrate metabolic process GO:0044262 135 0.015
regulation of cell cycle phase transition GO:1901987 70 0.015
carbohydrate derivative biosynthetic process GO:1901137 181 0.015
regulation of microtubule based process GO:0032886 32 0.014
cellular response to extracellular stimulus GO:0031668 150 0.014
nucleotide catabolic process GO:0009166 330 0.014
purine containing compound metabolic process GO:0072521 400 0.014
regulation of mitotic cell cycle phase transition GO:1901990 68 0.014
peptidyl amino acid modification GO:0018193 116 0.014
negative regulation of cellular biosynthetic process GO:0031327 312 0.014
generation of precursor metabolites and energy GO:0006091 147 0.014
metal ion homeostasis GO:0055065 79 0.014
negative regulation of macromolecule metabolic process GO:0010605 375 0.014
regulation of cellular ketone metabolic process by positive regulation of transcription from rna polymerase ii promoter GO:0072366 10 0.014
protein localization to membrane GO:0072657 102 0.014
conjugation with cellular fusion GO:0000747 106 0.014
regulation of transcription from rna polymerase ii promoter in response to stress GO:0043618 51 0.014
carbon catabolite regulation of transcription GO:0045990 39 0.013
cellular protein catabolic process GO:0044257 213 0.013
heterocycle catabolic process GO:0046700 494 0.013
ribose phosphate metabolic process GO:0019693 384 0.013
positive regulation of protein metabolic process GO:0051247 93 0.013
regulation of phosphorylation GO:0042325 86 0.013
cell cycle phase transition GO:0044770 144 0.013
ribonucleoside triphosphate catabolic process GO:0009203 327 0.012
hexose biosynthetic process GO:0019319 30 0.012
cofactor metabolic process GO:0051186 126 0.012
regulation of cellular protein metabolic process GO:0032268 232 0.012
cellular metal ion homeostasis GO:0006875 78 0.012
response to organic cyclic compound GO:0014070 1 0.012
positive regulation of ethanol catabolic process by positive regulation of transcription from rna polymerase ii promoter GO:0061425 1 0.012
detection of chemical stimulus GO:0009593 3 0.012
positive regulation of ethanol catabolic process GO:1900066 1 0.012
regulation of cell communication GO:0010646 124 0.012
nucleoside catabolic process GO:0009164 335 0.012
glycosyl compound metabolic process GO:1901657 398 0.012
regulation of growth of unicellular organism as a thread of attached cells GO:0070784 31 0.012
positive regulation of catabolic process GO:0009896 135 0.012
covalent chromatin modification GO:0016569 119 0.012
anatomical structure homeostasis GO:0060249 74 0.012
negative regulation of transcription dna templated GO:0045892 258 0.012
negative regulation of cellular metabolic process GO:0031324 407 0.012
cellular response to abiotic stimulus GO:0071214 62 0.011
regulation of cellular component biogenesis GO:0044087 112 0.011
response to monosaccharide GO:0034284 13 0.011
organic cyclic compound catabolic process GO:1901361 499 0.011
negative regulation of meiotic cell cycle GO:0051447 24 0.011
glycosyl compound catabolic process GO:1901658 335 0.011
cellular amino acid metabolic process GO:0006520 225 0.011
proteolysis involved in cellular protein catabolic process GO:0051603 198 0.011
mitochondrial genome maintenance GO:0000002 40 0.011
negative regulation of rna biosynthetic process GO:1902679 260 0.011
metaphase anaphase transition of mitotic cell cycle GO:0007091 28 0.011
regulation of protein kinase activity GO:0045859 67 0.011
ubiquitin dependent protein catabolic process GO:0006511 181 0.011
peroxisome organization GO:0007031 68 0.011
cellular alcohol metabolic process GO:0044107 34 0.011
purine ribonucleoside metabolic process GO:0046128 380 0.011
positive regulation of transcription from rna polymerase ii promoter in response to hydrostatic pressure GO:0061405 2 0.011
histone modification GO:0016570 119 0.011
cell wall assembly GO:0070726 54 0.011
cell growth GO:0016049 89 0.011
negative regulation of cytoskeleton organization GO:0051494 24 0.011
cellular lipid metabolic process GO:0044255 229 0.011
carbohydrate catabolic process GO:0016052 77 0.011
membrane organization GO:0061024 276 0.011
nucleoside phosphate catabolic process GO:1901292 331 0.011
alcohol metabolic process GO:0006066 112 0.011
regulation of dna templated transcription in response to stress GO:0043620 51 0.010
negative regulation of steroid metabolic process GO:0045939 1 0.010
response to hexose GO:0009746 13 0.010
cellular response to nutrient GO:0031670 50 0.010
dna replication GO:0006260 147 0.010
regulation of mitotic metaphase anaphase transition GO:0030071 27 0.010
positive regulation of fatty acid beta oxidation GO:0032000 3 0.010

RIM4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.028