Homo sapiens

0 known processes

PHF3

PHD finger protein 3

(Aliases: KIAA0244,MGC142212,MGC142210)

PHF3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
chromatin modification GO:0016568 298 0.483
organelle fission GO:0048285 149 0.419
chromatin organization GO:0006325 351 0.404
dna integration GO:0015074 3 0.288
cellular macromolecular complex assembly GO:0034622 324 0.266
cellular amine metabolic process GO:0044106 41 0.261
post embryonic development GO:0009791 2 0.259
cellular amino acid metabolic process GO:0006520 116 0.223
cellular response to endogenous stimulus GO:0071495 336 0.192
response to hormone GO:0009725 175 0.189
positive regulation of cellular amine metabolic process GO:0033240 7 0.163
cellular ketone metabolic process GO:0042180 80 0.158
regulation of cellular amino acid metabolic process GO:0006521 6 0.157
negative regulation of transcription from rna polymerase ii promoter GO:0000122 281 0.154
memory GO:0007613 3 0.148
organelle assembly GO:0070925 176 0.140
regulation of chromosome organization GO:0033044 103 0.129
cell development GO:0048468 328 0.128
cellular response to nitrogen compound GO:1901699 144 0.121
covalent chromatin modification GO:0016569 254 0.115
positive regulation of rab gtpase activity GO:0032851 39 0.115
positive regulation of protein phosphorylation GO:0001934 313 0.114
macromolecule methylation GO:0043414 97 0.113
long term memory GO:0007616 2 0.111
amine metabolic process GO:0009308 44 0.111
positive regulation of developmental process GO:0051094 314 0.109
regulation of cell cycle GO:0051726 393 0.102
system process GO:0003008 349 0.100
response to oxygen containing compound GO:1901700 369 0.100
dna repair GO:0006281 198 0.100
neuromuscular junction development GO:0007528 3 0.098
enzyme linked receptor protein signaling pathway GO:0007167 303 0.098
regulation of cellular amine metabolic process GO:0033238 11 0.097
neurological system process GO:0050877 163 0.096
transmembrane receptor protein tyrosine kinase signaling pathway GO:0007169 181 0.093
mitotic sister chromatid segregation GO:0000070 53 0.093
histone modification GO:0016570 251 0.089
nuclear division GO:0000280 128 0.089
vesicle mediated transport GO:0016192 371 0.086
cellular response to dna damage stimulus GO:0006974 379 0.082
regulation of cellular component biogenesis GO:0044087 281 0.081
chromosome segregation GO:0007059 114 0.081
embryonic epithelial tube formation GO:0001838 4 0.079
cell morphogenesis GO:0000902 296 0.075
positive regulation of organelle organization GO:0010638 195 0.075
regulation of cellular ketone metabolic process GO:0010565 50 0.071
cellular protein complex assembly GO:0043623 188 0.068
cell division GO:0051301 168 0.067
cellular response to oxygen containing compound GO:1901701 276 0.066
regulation of nuclear division GO:0051783 65 0.066
purine nucleotide catabolic process GO:0006195 405 0.064
cellular component morphogenesis GO:0032989 314 0.064
mitotic cell cycle GO:0000278 326 0.062
determination of adult lifespan GO:0008340 2 0.061
positive regulation of cellular component organization GO:0051130 376 0.059
cellular macromolecule catabolic process GO:0044265 380 0.057
response to radiation GO:0009314 151 0.056
primary neural tube formation GO:0014020 3 0.056
circulatory system development GO:0072359 262 0.052
intracellular protein transport GO:0006886 270 0.052
mitotic cell cycle process GO:1903047 286 0.051
cell projection organization GO:0030030 252 0.050
multicellular organismal aging GO:0010259 3 0.050
microtubule cytoskeleton organization GO:0000226 176 0.049
embryonic forelimb morphogenesis GO:0035115 4 0.049
cellular response to organonitrogen compound GO:0071417 124 0.047
nucleosome organization GO:0034728 66 0.046
regulation of chromatin organization GO:1902275 56 0.046
growth GO:0040007 202 0.046
male meiosis GO:0007140 1 0.044
forelimb morphogenesis GO:0035136 4 0.044
reproductive process GO:0022414 106 0.043
negative regulation of cellular protein metabolic process GO:0032269 353 0.042
single organism reproductive process GO:0044702 98 0.042
response to peptide GO:1901652 65 0.042
positive regulation of purine nucleotide metabolic process GO:1900544 227 0.042
regulation of sequence specific dna binding transcription factor activity GO:0051090 211 0.041
regulation of growth GO:0040008 165 0.041
heart development GO:0007507 95 0.038
regulation of chromatin modification GO:1903308 51 0.038
negative regulation of protein modification process GO:0031400 200 0.038
ribonucleoside triphosphate catabolic process GO:0009203 391 0.038
modification dependent macromolecule catabolic process GO:0043632 212 0.036
skeletal system development GO:0001501 79 0.036
response to growth factor GO:0070848 205 0.036
head development GO:0060322 108 0.035
embryo development GO:0009790 123 0.035
anatomical structure formation involved in morphogenesis GO:0048646 284 0.035
epithelium development GO:0060429 227 0.033
methylation GO:0032259 106 0.033
negative regulation of protein metabolic process GO:0051248 391 0.033
ribonucleoside catabolic process GO:0042454 406 0.033
small gtpase mediated signal transduction GO:0007264 78 0.032
positive regulation of gtpase activity GO:0043547 166 0.032
cellular response to ionizing radiation GO:0071479 32 0.032
microtubule based process GO:0007017 210 0.032
double strand break repair GO:0006302 101 0.031
proteolysis involved in cellular protein catabolic process GO:0051603 244 0.031
response to abiotic stimulus GO:0009628 336 0.031
regulation of rab gtpase activity GO:0032313 39 0.031
positive regulation of ras gtpase activity GO:0032320 117 0.031
cellular response to abiotic stimulus GO:0071214 117 0.031
skeletal system morphogenesis GO:0048705 24 0.031
response to biotic stimulus GO:0009607 276 0.030
regulation of anatomical structure morphogenesis GO:0022603 286 0.030
female gamete generation GO:0007292 2 0.030
stem cell development GO:0048864 69 0.029
neural tube formation GO:0001841 3 0.029
epithelial cell differentiation GO:0030855 141 0.029
positive regulation of peptidyl serine phosphorylation GO:0033138 42 0.028
male sex differentiation GO:0046661 25 0.028
cell projection morphogenesis GO:0048858 129 0.027
cellular response to lipid GO:0071396 127 0.027
maintenance of location GO:0051235 112 0.027
positive regulation of phosphorylation GO:0042327 394 0.027
cell part morphogenesis GO:0032990 137 0.027
morphogenesis of embryonic epithelium GO:0016331 4 0.027
regulation of cell morphogenesis GO:0022604 153 0.027
membrane organization GO:0061024 292 0.027
cardiovascular system development GO:0072358 262 0.027
response to other organism GO:0051707 261 0.026
regulation of intracellular transport GO:0032386 195 0.026
positive regulation of programmed cell death GO:0043068 249 0.026
reproductive structure development GO:0048608 55 0.026
purine containing compound catabolic process GO:0072523 411 0.026
tor signaling GO:0031929 39 0.026
glycosyl compound catabolic process GO:1901658 413 0.026
regulation of protein complex assembly GO:0043254 147 0.026
ubiquitin dependent protein catabolic process GO:0006511 206 0.025
positive regulation of catabolic process GO:0009896 310 0.025
modification dependent protein catabolic process GO:0019941 209 0.024
cellular component assembly involved in morphogenesis GO:0010927 73 0.024
negative regulation of developmental process GO:0051093 247 0.024
stem cell differentiation GO:0048863 93 0.024
response to nitrogen compound GO:1901698 184 0.024
positive regulation of cell development GO:0010720 92 0.023
behavior GO:0007610 112 0.023
neuroblast proliferation GO:0007405 4 0.023
regulation of purine nucleotide metabolic process GO:1900542 264 0.023
cytoplasmic transport GO:0016482 379 0.022
tube closure GO:0060606 3 0.022
response to ionizing radiation GO:0010212 65 0.022
embryonic organ morphogenesis GO:0048562 24 0.022
chromatin remodeling GO:0006338 55 0.022
regulation of extrinsic apoptotic signaling pathway GO:2001236 85 0.022
behavioral response to ethanol GO:0048149 2 0.022
mitotic nuclear division GO:0007067 119 0.021
purine ribonucleoside triphosphate catabolic process GO:0009207 391 0.021
nucleotide catabolic process GO:0009166 408 0.021
negative regulation of phosphorus metabolic process GO:0010563 267 0.021
Human
regulation of nucleotide metabolic process GO:0006140 269 0.021
cilium organization GO:0044782 68 0.020
sister chromatid cohesion GO:0007062 24 0.020
negative regulation of catalytic activity GO:0043086 335 0.020
Human
positive regulation of cellular component biogenesis GO:0044089 158 0.020
cellular response to organic cyclic compound GO:0071407 127 0.020
peptidyl serine phosphorylation GO:0018105 101 0.020
regulation of embryonic development GO:0045995 20 0.020
aging GO:0007568 66 0.020
cellular protein catabolic process GO:0044257 261 0.019
cellular response to radiation GO:0071478 65 0.019
regulation of cell division GO:0051302 116 0.019
positive regulation of nucleotide metabolic process GO:0045981 230 0.019
regulation of gtpase activity GO:0043087 180 0.019
ossification GO:0001503 121 0.019
cilium morphogenesis GO:0060271 75 0.019
regulation of meiosis GO:0040020 3 0.019
spindle organization GO:0007051 53 0.019
regulation of neural precursor cell proliferation GO:2000177 4 0.018
negative regulation of phosphorylation GO:0042326 174 0.018
protein targeting GO:0006605 187 0.018
response to organic cyclic compound GO:0014070 204 0.018
aldehyde biosynthetic process GO:0046184 3 0.018
generation of neurons GO:0048699 152 0.018
regulation of dna metabolic process GO:0051052 153 0.018
nucleoside catabolic process GO:0009164 408 0.018
nervous system development GO:0007399 293 0.018
regulation of dna binding GO:0051101 37 0.018
brain development GO:0007420 97 0.017
histone lysine methylation GO:0034968 50 0.017
cellular response to growth factor stimulus GO:0071363 197 0.017
epithelial cell development GO:0002064 34 0.017
negative regulation of extrinsic apoptotic signaling pathway GO:2001237 52 0.017
protein ubiquitination GO:0016567 314 0.017
cell morphogenesis involved in differentiation GO:0000904 144 0.017
nucleoside phosphate catabolic process GO:1901292 412 0.017
negative regulation of cellular amine metabolic process GO:0033239 3 0.016
mapk cascade GO:0000165 288 0.016
hindbrain development GO:0030902 3 0.016
single organism membrane organization GO:0044802 268 0.016
positive regulation of kinase activity GO:0033674 204 0.016
multi organism cellular process GO:0044764 156 0.016
oogenesis GO:0048477 2 0.016
developmental process involved in reproduction GO:0003006 66 0.016
interspecies interaction between organisms GO:0044419 156 0.016
single organism cellular localization GO:1902580 332 0.016
nucleoside triphosphate metabolic process GO:0009141 422 0.016
cognition GO:0050890 43 0.015
regulation of protein processing GO:0070613 150 0.015
embryonic placenta development GO:0001892 1 0.015
embryonic morphogenesis GO:0048598 85 0.015
nucleocytoplasmic transport GO:0006913 176 0.015
response to organonitrogen compound GO:0010243 156 0.015
protein localization to nucleus GO:0034504 136 0.015
neuron development GO:0048666 113 0.015
negative regulation of phosphate metabolic process GO:0045936 267 0.015
Human
single organism nuclear import GO:1902593 104 0.015
sister chromatid segregation GO:0000819 54 0.015
coronary vasculature development GO:0060976 2 0.015
myosin filament organization GO:0031033 2 0.015
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 156 0.015
positive regulation of cellular amino acid metabolic process GO:0045764 3 0.015
male gonad development GO:0008584 23 0.015
regulation of cytoplasmic transport GO:1903649 149 0.015
tube morphogenesis GO:0035239 95 0.015
negative regulation of programmed cell death GO:0043069 321 0.015
nucleobase containing compound transport GO:0015931 51 0.015
regulation of developmental growth GO:0048638 30 0.015
cellular response to hormone stimulus GO:0032870 125 0.014
mitotic cell cycle phase transition GO:0044772 162 0.014
positive regulation of hydrolase activity GO:0051345 331 0.014
tube development GO:0035295 125 0.014
protein import GO:0017038 130 0.014
embryonic cranial skeleton morphogenesis GO:0048701 6 0.014
ribonucleoprotein complex assembly GO:0022618 78 0.014
multi organism reproductive process GO:0044703 54 0.014
proteasomal protein catabolic process GO:0010498 176 0.014
extrinsic apoptotic signaling pathway GO:0097191 119 0.014
insulin receptor signaling pathway GO:0008286 23 0.014
regulation of proteolysis GO:0030162 293 0.014
reproduction GO:0000003 63 0.013
neural tube closure GO:0001843 3 0.013
purine nucleoside catabolic process GO:0006152 398 0.013
negative regulation of cell differentiation GO:0045596 171 0.013
detection of stimulus involved in sensory perception GO:0050906 43 0.013
neurogenesis GO:0022008 169 0.013
synaptic transmission GO:0007268 61 0.013
nucleoside triphosphate catabolic process GO:0009143 394 0.013
dna packaging GO:0006323 77 0.013
sensory perception of mechanical stimulus GO:0050954 37 0.013
purine nucleoside triphosphate metabolic process GO:0009144 412 0.013
response to peptide hormone GO:0043434 61 0.013
histone ubiquitination GO:0016574 31 0.013
positive regulation of apoptotic process GO:0043065 246 0.013
positive regulation of gtp catabolic process GO:0033126 166 0.013
embryonic organ development GO:0048568 36 0.012
regulation of ras protein signal transduction GO:0046578 155 0.012
ribonucleoside triphosphate metabolic process GO:0009199 412 0.012
positive regulation of nucleoside metabolic process GO:0045979 186 0.012
sensory perception GO:0007600 103 0.012
positive regulation of nucleotide catabolic process GO:0030813 185 0.012
negative regulation of organelle organization GO:0010639 126 0.012
sex differentiation GO:0007548 45 0.012
endocytosis GO:0006897 159 0.012
positive regulation of cell differentiation GO:0045597 211 0.012
ear morphogenesis GO:0042471 7 0.012
positive regulation of chromatin modification GO:1903310 30 0.012
embryonic viscerocranium morphogenesis GO:0048703 1 0.012
regulation of histone modification GO:0031056 47 0.012
regionalization GO:0003002 29 0.012
rab protein signal transduction GO:0032482 4 0.012
regulation of organelle assembly GO:1902115 40 0.012
myosin filament assembly GO:0031034 2 0.012
regulation of cell cycle process GO:0010564 266 0.012
peptidyl threonine modification GO:0018210 45 0.012
striated muscle myosin thick filament assembly GO:0071688 2 0.012
positive regulation of cell cycle process GO:0090068 106 0.012
protein localization to organelle GO:0033365 280 0.011
ribonucleoprotein complex subunit organization GO:0071826 81 0.011
regulation of cell differentiation GO:0045595 393 0.011
protein acetylation GO:0006473 116 0.011
positive regulation of purine nucleotide catabolic process GO:0033123 185 0.011
peptidyl serine modification GO:0018209 106 0.011
nitrogen compound transport GO:0071705 191 0.011
regulation of multi organism process GO:0043900 157 0.011
reproductive system development GO:0061458 56 0.011
protein modification by small protein removal GO:0070646 92 0.011
viral process GO:0016032 146 0.011
microtubule organizing center organization GO:0031023 62 0.011
regulation of protein kinase activity GO:0045859 289 0.011
oocyte development GO:0048599 1 0.011
positive regulation of developmental growth GO:0048639 16 0.011
ras protein signal transduction GO:0007265 73 0.011
positive regulation of cell size GO:0045793 3 0.011
purine ribonucleoside triphosphate metabolic process GO:0009205 411 0.011
peptidyl lysine modification GO:0018205 144 0.011
purine ribonucleoside catabolic process GO:0046130 398 0.011
negative regulation of sequence specific dna binding transcription factor activity GO:0043433 89 0.011
actin filament based process GO:0030029 224 0.011
multicellular organismal reproductive process GO:0048609 40 0.011
neuron differentiation GO:0030182 138 0.011
regulation of cellular protein catabolic process GO:1903362 96 0.011
striated muscle cell differentiation GO:0051146 43 0.011
establishment of protein localization to organelle GO:0072594 172 0.011
retrograde transport endosome to golgi GO:0042147 45 0.010
rna processing GO:0006396 255 0.010
positive regulation of protein kinase activity GO:0045860 190 0.010
regulation of viral process GO:0050792 103 0.010
regulation of proteasomal ubiquitin dependent protein catabolic process GO:0032434 71 0.010
positive regulation of cellular catabolic process GO:0031331 284 0.010
sensory organ morphogenesis GO:0090596 21 0.010
developmental growth GO:0048589 48 0.010

PHF3 disease predictions

Disease DO term ID Size Probability Func Analog Org
disease of cellular proliferation DOID:14566 174 0.026
cancer DOID:162 167 0.026
organ system cancer DOID:0050686 164 0.020
nervous system disease DOID:863 431 0.014
sensory system disease DOID:0050155 203 0.014