Saccharomyces cerevisiae

17 known processes

APM1 (YPL259C)

Apm1p

(Aliases: YAP54)

APM1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
vesicle mediated transport GO:0016192 335 0.843
vacuolar transport GO:0007034 145 0.817
post golgi vesicle mediated transport GO:0006892 72 0.770
golgi vesicle transport GO:0048193 188 0.530
golgi to vacuole transport GO:0006896 23 0.241
single organism developmental process GO:0044767 258 0.228
Human Worm Fly
developmental process GO:0032502 261 0.199
Human Worm Fly
endomembrane system organization GO:0010256 74 0.185
Fly
regulation of cellular component organization GO:0051128 334 0.169
protein localization to organelle GO:0033365 337 0.137
Worm
nucleoside phosphate metabolic process GO:0006753 458 0.136
organophosphate metabolic process GO:0019637 597 0.126
response to external stimulus GO:0009605 158 0.123
Human
single organism membrane organization GO:0044802 275 0.121
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.121
protein catabolic process GO:0030163 221 0.113
nucleotide metabolic process GO:0009117 453 0.112
establishment of protein localization GO:0045184 367 0.111
Worm Fly
negative regulation of gene expression GO:0010629 312 0.104
positive regulation of gene expression GO:0010628 321 0.104
transcription elongation from rna polymerase ii promoter GO:0006368 81 0.102
positive regulation of rna metabolic process GO:0051254 294 0.099
positive regulation of macromolecule metabolic process GO:0010604 394 0.099
regulation of localization GO:0032879 127 0.099
Fly
cellular developmental process GO:0048869 191 0.095
Human Worm
cellular protein complex assembly GO:0043623 209 0.090
nucleobase containing small molecule metabolic process GO:0055086 491 0.088
regulation of vesicle mediated transport GO:0060627 39 0.087
Fly
organonitrogen compound biosynthetic process GO:1901566 314 0.086
single organism cellular localization GO:1902580 375 0.084
aromatic compound catabolic process GO:0019439 491 0.084
cellular macromolecule catabolic process GO:0044265 363 0.084
dna templated transcription elongation GO:0006354 91 0.083
organelle assembly GO:0070925 118 0.081
Worm
coenzyme biosynthetic process GO:0009108 66 0.081
protein modification by small protein conjugation or removal GO:0070647 172 0.080
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.078
macromolecule catabolic process GO:0009057 383 0.074
negative regulation of cellular component organization GO:0051129 109 0.074
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.074
negative regulation of biosynthetic process GO:0009890 312 0.072
protein dephosphorylation GO:0006470 40 0.070
nucleobase containing compound catabolic process GO:0034655 479 0.070
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.069
protein complex biogenesis GO:0070271 314 0.068
proteolysis involved in cellular protein catabolic process GO:0051603 198 0.066
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.065
dephosphorylation GO:0016311 127 0.065
metal ion transport GO:0030001 75 0.061
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.061
cellular protein catabolic process GO:0044257 213 0.060
protein ubiquitination GO:0016567 118 0.058
sulfur compound biosynthetic process GO:0044272 53 0.057
ubiquitin dependent protein catabolic process GO:0006511 181 0.057
rna localization GO:0006403 112 0.057
purine nucleoside monophosphate metabolic process GO:0009126 262 0.056
phosphorylation GO:0016310 291 0.056
single organism carbohydrate metabolic process GO:0044723 237 0.055
nuclear transcribed mrna catabolic process GO:0000956 89 0.055
carbohydrate derivative metabolic process GO:1901135 549 0.053
ribonucleoside monophosphate metabolic process GO:0009161 265 0.051
carbohydrate derivative biosynthetic process GO:1901137 181 0.050
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.050
oxoacid metabolic process GO:0043436 351 0.048
establishment of protein localization to organelle GO:0072594 278 0.048
cell differentiation GO:0030154 161 0.048
Human
protein transport GO:0015031 345 0.047
Worm Fly
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.047
nucleoside metabolic process GO:0009116 394 0.046
positive regulation of nucleic acid templated transcription GO:1903508 286 0.046
coenzyme metabolic process GO:0006732 104 0.046
golgi to endosome transport GO:0006895 17 0.045
cofactor biosynthetic process GO:0051188 80 0.045
rna 3 end processing GO:0031123 88 0.045
cell communication GO:0007154 345 0.044
Fly
mrna 3 end processing GO:0031124 54 0.043
nicotinamide nucleotide biosynthetic process GO:0019359 16 0.042
cellular nitrogen compound catabolic process GO:0044270 494 0.042
pyridine containing compound biosynthetic process GO:0072525 24 0.042
heterocycle catabolic process GO:0046700 494 0.041
purine nucleoside catabolic process GO:0006152 330 0.041
carbohydrate derivative catabolic process GO:1901136 339 0.040
positive regulation of cellular biosynthetic process GO:0031328 336 0.040
organelle inheritance GO:0048308 51 0.040
proteolysis GO:0006508 268 0.040
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.038
cellular amino acid metabolic process GO:0006520 225 0.038
protein targeting to vacuole GO:0006623 91 0.038
carboxylic acid metabolic process GO:0019752 338 0.038
cofactor metabolic process GO:0051186 126 0.038
regulation of phosphorus metabolic process GO:0051174 230 0.038
negative regulation of rna metabolic process GO:0051253 262 0.037
purine nucleoside triphosphate catabolic process GO:0009146 329 0.037
glycosyl compound metabolic process GO:1901657 398 0.037
modification dependent macromolecule catabolic process GO:0043632 203 0.037
ribonucleoprotein complex assembly GO:0022618 143 0.037
regulation of protein localization GO:0032880 62 0.036
protein complex assembly GO:0006461 302 0.036
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 38 0.036
rrna metabolic process GO:0016072 244 0.036
dna replication GO:0006260 147 0.036
regulation of gene expression epigenetic GO:0040029 147 0.035
endocytosis GO:0006897 90 0.035
regulation of catalytic activity GO:0050790 307 0.035
organophosphate biosynthetic process GO:0090407 182 0.035
nucleoside phosphate biosynthetic process GO:1901293 80 0.035
regulation of carbohydrate metabolic process GO:0006109 43 0.035
pyridine nucleotide metabolic process GO:0019362 45 0.034
regulation of dna templated transcription elongation GO:0032784 44 0.034
positive regulation of biosynthetic process GO:0009891 336 0.033
regulation of cellular protein catabolic process GO:1903362 36 0.033
purine ribonucleoside metabolic process GO:0046128 380 0.033
regulation of cellular protein metabolic process GO:0032268 232 0.033
nucleotide catabolic process GO:0009166 330 0.033
transmembrane transport GO:0055085 349 0.032
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 137 0.032
purine ribonucleotide catabolic process GO:0009154 327 0.032
ion transport GO:0006811 274 0.031
protein localization to nucleus GO:0034504 74 0.031
positive regulation of phosphorus metabolic process GO:0010562 147 0.031
cytokinesis GO:0000910 92 0.031
purine containing compound catabolic process GO:0072523 332 0.031
mitotic cell cycle GO:0000278 306 0.030
purine nucleoside triphosphate metabolic process GO:0009144 356 0.029
membrane organization GO:0061024 276 0.029
purine nucleoside metabolic process GO:0042278 380 0.029
ribonucleotide metabolic process GO:0009259 377 0.029
ribonucleoside metabolic process GO:0009119 389 0.029
purine ribonucleotide metabolic process GO:0009150 372 0.029
modification dependent protein catabolic process GO:0019941 181 0.029
mrna transport GO:0051028 60 0.029
organic cyclic compound catabolic process GO:1901361 499 0.028
cation transport GO:0006812 166 0.028
purine nucleotide catabolic process GO:0006195 328 0.028
regulation of dna metabolic process GO:0051052 100 0.028
response to organic substance GO:0010033 182 0.028
regulation of protein catabolic process GO:0042176 40 0.027
regulation of catabolic process GO:0009894 199 0.027
rna catabolic process GO:0006401 118 0.027
organonitrogen compound catabolic process GO:1901565 404 0.027
positive regulation of transcription dna templated GO:0045893 286 0.027
response to abiotic stimulus GO:0009628 159 0.027
phosphatidylinositol metabolic process GO:0046488 62 0.027
plasma membrane organization GO:0007009 21 0.026
nucleoside catabolic process GO:0009164 335 0.026
generation of precursor metabolites and energy GO:0006091 147 0.026
nucleoside triphosphate catabolic process GO:0009143 329 0.026
regulation of protein complex assembly GO:0043254 77 0.025
positive regulation of dna templated transcription elongation GO:0032786 42 0.025
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.025
proteasomal protein catabolic process GO:0010498 141 0.025
oxidation reduction process GO:0055114 353 0.025
negative regulation of rna biosynthetic process GO:1902679 260 0.025
small molecule biosynthetic process GO:0044283 258 0.025
positive regulation of protein metabolic process GO:0051247 93 0.025
regulation of phosphate metabolic process GO:0019220 230 0.025
positive regulation of nucleotide metabolic process GO:0045981 101 0.024
purine ribonucleoside monophosphate catabolic process GO:0009169 224 0.024
negative regulation of nucleic acid templated transcription GO:1903507 260 0.024
peroxisome degradation GO:0030242 22 0.024
sporulation resulting in formation of a cellular spore GO:0030435 129 0.024
mrna processing GO:0006397 185 0.024
regulation of cellular catabolic process GO:0031329 195 0.024
nucleoside monophosphate metabolic process GO:0009123 267 0.024
negative regulation of cellular biosynthetic process GO:0031327 312 0.024
nucleoside triphosphate metabolic process GO:0009141 364 0.024
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.024
nucleotide biosynthetic process GO:0009165 79 0.024
protein targeting GO:0006605 272 0.023
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 36 0.023
ribonucleoside triphosphate catabolic process GO:0009203 327 0.023
cellular cation homeostasis GO:0030003 100 0.023
positive regulation of rna biosynthetic process GO:1902680 286 0.023
protein modification by small protein conjugation GO:0032446 144 0.023
endosomal transport GO:0016197 86 0.022
Human Fly
rna phosphodiester bond hydrolysis GO:0090501 112 0.022
ion transmembrane transport GO:0034220 200 0.022
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 40 0.022
response to organic cyclic compound GO:0014070 1 0.022
ribonucleoside triphosphate metabolic process GO:0009199 356 0.022
anatomical structure formation involved in morphogenesis GO:0048646 136 0.022
Worm
ribosome assembly GO:0042255 57 0.021
mrna export from nucleus GO:0006406 60 0.021
glycerolipid biosynthetic process GO:0045017 71 0.021
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.021
dna conformation change GO:0071103 98 0.021
carboxylic acid biosynthetic process GO:0046394 152 0.021
multi organism reproductive process GO:0044703 216 0.021
regulation of cellular localization GO:0060341 50 0.021
Fly
nucleoside phosphate catabolic process GO:1901292 331 0.021
chromatin silencing GO:0006342 147 0.021
negative regulation of transcription dna templated GO:0045892 258 0.021
nuclear division GO:0000280 263 0.021
nitrogen compound transport GO:0071705 212 0.021
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.020
pyridine nucleotide biosynthetic process GO:0019363 17 0.020
dna packaging GO:0006323 55 0.020
regulation of protein metabolic process GO:0051246 237 0.020
purine nucleotide metabolic process GO:0006163 376 0.020
nucleoside monophosphate catabolic process GO:0009125 224 0.020
organic acid biosynthetic process GO:0016053 152 0.020
developmental process involved in reproduction GO:0003006 159 0.020
negative regulation of cellular metabolic process GO:0031324 407 0.020
ncrna processing GO:0034470 330 0.019
homeostatic process GO:0042592 227 0.019
rna phosphodiester bond hydrolysis endonucleolytic GO:0090502 79 0.019
purine ribonucleoside catabolic process GO:0046130 330 0.019
negative regulation of proteolysis involved in cellular protein catabolic process GO:1903051 27 0.019
regulation of dephosphorylation GO:0035303 18 0.019
membrane invagination GO:0010324 43 0.019
positive regulation of phosphate metabolic process GO:0045937 147 0.019
sporulation GO:0043934 132 0.019
translation GO:0006412 230 0.019
mrna catabolic process GO:0006402 93 0.019
ribose phosphate metabolic process GO:0019693 384 0.019
transfer rna gene mediated silencing GO:0061587 14 0.019
carbohydrate metabolic process GO:0005975 252 0.019
protein glycosylation GO:0006486 57 0.019
regulation of cell cycle GO:0051726 195 0.018
cellular homeostasis GO:0019725 138 0.018
positive regulation of catabolic process GO:0009896 135 0.018
single organism catabolic process GO:0044712 619 0.018
regulation of signaling GO:0023051 119 0.018
Fly
response to nutrient levels GO:0031667 150 0.018
ribonucleoprotein complex subunit organization GO:0071826 152 0.018
reproductive process in single celled organism GO:0022413 145 0.018
negative regulation of chromosome organization GO:2001251 39 0.018
organelle fission GO:0048285 272 0.018
dna integrity checkpoint GO:0031570 41 0.018
negative regulation of protein metabolic process GO:0051248 85 0.018
mrna metabolic process GO:0016071 269 0.018
posttranscriptional regulation of gene expression GO:0010608 115 0.018
chemical homeostasis GO:0048878 137 0.018
organic acid metabolic process GO:0006082 352 0.018
organophosphate catabolic process GO:0046434 338 0.017
atp catabolic process GO:0006200 224 0.017
purine containing compound metabolic process GO:0072521 400 0.017
regulation of cell division GO:0051302 113 0.017
conjugation GO:0000746 107 0.017
late endosome to vacuole transport GO:0045324 42 0.017
signal transduction GO:0007165 208 0.017
Fly
response to extracellular stimulus GO:0009991 156 0.017
regulation of transport GO:0051049 85 0.017
Fly
energy derivation by oxidation of organic compounds GO:0015980 125 0.017
ribonucleotide catabolic process GO:0009261 327 0.017
intracellular protein transport GO:0006886 319 0.016
protein phosphorylation GO:0006468 197 0.016
mitotic nuclear division GO:0007067 131 0.016
reproductive process GO:0022414 248 0.016
negative regulation of protein maturation GO:1903318 33 0.016
ribosome biogenesis GO:0042254 335 0.016
cellular transition metal ion homeostasis GO:0046916 59 0.016
regulation of cellular component biogenesis GO:0044087 112 0.016
negative regulation of cellular protein catabolic process GO:1903363 27 0.016
rna transport GO:0050658 92 0.016
regulation of molecular function GO:0065009 320 0.016
positive regulation of purine nucleotide catabolic process GO:0033123 97 0.016
negative regulation of chromosome segregation GO:0051985 25 0.016
negative regulation of proteasomal protein catabolic process GO:1901799 25 0.016
gene silencing GO:0016458 151 0.016
cell development GO:0048468 107 0.015
regulation of nucleotide metabolic process GO:0006140 110 0.015
inorganic ion transmembrane transport GO:0098660 109 0.015
rna export from nucleus GO:0006405 88 0.015
protein localization to vacuole GO:0072665 92 0.015
phosphatidylinositol biosynthetic process GO:0006661 39 0.015
mitotic cell cycle phase transition GO:0044772 141 0.015
protein localization to membrane GO:0072657 102 0.015
ascospore formation GO:0030437 107 0.014
glycosyl compound catabolic process GO:1901658 335 0.014
autophagy GO:0006914 106 0.014
response to temperature stimulus GO:0009266 74 0.014
lipoprotein metabolic process GO:0042157 40 0.014
mitotic cytokinesis site selection GO:1902408 35 0.014
glycoprotein biosynthetic process GO:0009101 61 0.014
regulation of proteasomal protein catabolic process GO:0061136 34 0.014
ribonucleoside catabolic process GO:0042454 332 0.014
negative regulation of cellular protein metabolic process GO:0032269 85 0.014
organelle fusion GO:0048284 85 0.014
positive regulation of lipid catabolic process GO:0050996 4 0.014
regulation of biological quality GO:0065008 391 0.014
signal transduction involved in conjugation with cellular fusion GO:0032005 31 0.014
single organism signaling GO:0044700 208 0.014
Fly
protein processing GO:0016485 64 0.014
protein localization to chromosome GO:0034502 28 0.013
ribosomal small subunit biogenesis GO:0042274 124 0.013
regulation of mitotic sister chromatid segregation GO:0033047 30 0.013
maintenance of location GO:0051235 66 0.013
regulation of translation GO:0006417 89 0.013
multi organism process GO:0051704 233 0.013
membrane budding GO:0006900 22 0.013
cellular amino acid biosynthetic process GO:0008652 118 0.013
sexual sporulation GO:0034293 113 0.013
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.013
negative regulation of protein catabolic process GO:0042177 27 0.013
negative regulation of cellular catabolic process GO:0031330 43 0.013
aerobic respiration GO:0009060 55 0.013
transcription from rna polymerase i promoter GO:0006360 63 0.013
single organism membrane budding GO:1902591 21 0.013
regulation of mitochondrial translation GO:0070129 15 0.013
establishment of protein localization to membrane GO:0090150 99 0.013
response to heat GO:0009408 69 0.013
response to uv GO:0009411 4 0.013
protein modification by small protein removal GO:0070646 29 0.013
nuclear transcribed mrna catabolic process deadenylation dependent decay GO:0000288 44 0.013
cell division GO:0051301 205 0.013
negative regulation of macromolecule metabolic process GO:0010605 375 0.013
cytokinesis site selection GO:0007105 40 0.013
nad biosynthetic process GO:0009435 13 0.013
cellular ion homeostasis GO:0006873 112 0.013
nucleobase containing compound transport GO:0015931 124 0.012
sex determination GO:0007530 32 0.012
pheromone dependent signal transduction involved in conjugation with cellular fusion GO:0000750 31 0.012
glycerophospholipid metabolic process GO:0006650 98 0.012
nuclear export GO:0051168 124 0.012
regulation of purine nucleotide catabolic process GO:0033121 106 0.012
cellular response to abiotic stimulus GO:0071214 62 0.012
mitotic cell cycle process GO:1903047 294 0.012
anatomical structure morphogenesis GO:0009653 160 0.012
Worm
mitotic cytokinesis GO:0000281 58 0.012
cell cell adhesion GO:0098609 4 0.012
cellular response to external stimulus GO:0071496 150 0.012
trna processing GO:0008033 101 0.012
cellular response to organic substance GO:0071310 159 0.012
positive regulation of nucleoside metabolic process GO:0045979 97 0.012
conjugation with cellular fusion GO:0000747 106 0.012
macroautophagy GO:0016236 55 0.012
mating type determination GO:0007531 32 0.012
regulation of sodium ion transport GO:0002028 1 0.012
energy reserve metabolic process GO:0006112 32 0.012
regulation of receptor mediated endocytosis GO:0048259 4 0.012
regulation of nucleoside metabolic process GO:0009118 106 0.011
nucleocytoplasmic transport GO:0006913 163 0.011
positive regulation of cellular protein metabolic process GO:0032270 89 0.011
sexual reproduction GO:0019953 216 0.011
glycerophospholipid biosynthetic process GO:0046474 68 0.011
regulation of chromosome segregation GO:0051983 44 0.011
response to calcium ion GO:0051592 1 0.011
cellular response to dna damage stimulus GO:0006974 287 0.011
negative regulation of catabolic process GO:0009895 43 0.011
macromolecule glycosylation GO:0043413 57 0.011
polysaccharide metabolic process GO:0005976 60 0.011
maintenance of protein location in cell GO:0032507 50 0.011
regulation of chromosome organization GO:0033044 66 0.011
phospholipid biosynthetic process GO:0008654 89 0.011
rrna processing GO:0006364 227 0.011
cellular chemical homeostasis GO:0055082 123 0.011
cellular component morphogenesis GO:0032989 97 0.011
Worm
regulation of hydrolase activity GO:0051336 133 0.011
protein localization to plasma membrane GO:0072659 18 0.011
regulation of mitotic metaphase anaphase transition GO:0030071 27 0.011
signaling GO:0023052 208 0.011
Fly
protein complex disassembly GO:0043241 70 0.011
cell cycle phase transition GO:0044770 144 0.011
positive regulation of purine nucleotide metabolic process GO:1900544 100 0.011
response to oxygen containing compound GO:1901700 61 0.011
regulation of protein modification process GO:0031399 110 0.011
establishment of protein localization to vacuole GO:0072666 91 0.011
meiotic nuclear division GO:0007126 163 0.011
positive regulation of nucleotide catabolic process GO:0030813 97 0.011
invasive filamentous growth GO:0036267 65 0.011
carbon catabolite regulation of transcription from rna polymerase ii promoter GO:0000429 34 0.011
cellular respiration GO:0045333 82 0.010
glucan metabolic process GO:0044042 44 0.010
filamentous growth of a population of unicellular organisms GO:0044182 109 0.010
nicotinamide nucleotide metabolic process GO:0046496 44 0.010
cellular response to extracellular stimulus GO:0031668 150 0.010
sexual sporulation resulting in formation of a cellular spore GO:0043935 113 0.010
establishment of rna localization GO:0051236 92 0.010
phospholipid metabolic process GO:0006644 125 0.010
regulation of multi organism process GO:0043900 20 0.010
regulation of proteolysis GO:0030162 44 0.010
cellular polysaccharide metabolic process GO:0044264 55 0.010

APM1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.029
nervous system disease DOID:863 0 0.012