Saccharomyces cerevisiae

241 known processes

RPD3 (YNL330C)

Rpd3p

(Aliases: MOF6,REC3,SDI2,SDS6)

RPD3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.999
negative regulation of biosynthetic process GO:0009890 312 0.999
negative regulation of macromolecule metabolic process GO:0010605 375 0.999
negative regulation of transcription dna templated GO:0045892 258 0.999
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.999
negative regulation of rna metabolic process GO:0051253 262 0.999
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.999
negative regulation of rna biosynthetic process GO:1902679 260 0.999
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.998
negative regulation of cellular biosynthetic process GO:0031327 312 0.997
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.996
chromatin silencing GO:0006342 147 0.996
negative regulation of nucleic acid templated transcription GO:1903507 260 0.995
negative regulation of cellular metabolic process GO:0031324 407 0.992
negative regulation of gene expression epigenetic GO:0045814 147 0.990
regulation of gene expression epigenetic GO:0040029 147 0.989
positive regulation of macromolecule metabolic process GO:0010604 394 0.988
negative regulation of gene expression GO:0010629 312 0.984
positive regulation of cellular biosynthetic process GO:0031328 336 0.983
positive regulation of biosynthetic process GO:0009891 336 0.977
chromatin silencing at telomere GO:0006348 84 0.977
regulation of chromatin silencing at telomere GO:0031938 27 0.977
positive regulation of rna biosynthetic process GO:1902680 286 0.974
gene silencing GO:0016458 151 0.970
positive regulation of gene expression GO:0010628 321 0.918
positive regulation of transcription dna templated GO:0045893 286 0.904
positive regulation of rna metabolic process GO:0051254 294 0.895
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.866
positive regulation of gene expression epigenetic GO:0045815 25 0.862
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.862
transcription elongation from rna polymerase ii promoter GO:0006368 81 0.838
negative regulation of chromatin silencing at telomere GO:0031939 15 0.836
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.825
regulation of growth GO:0040008 50 0.825
chromatin organization GO:0006325 242 0.807
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.782
regulation of chromatin silencing GO:0031935 39 0.752
chromatin modification GO:0016568 200 0.732
regulation of cell cycle GO:0051726 195 0.730
histone modification GO:0016570 119 0.723
positive regulation of nucleic acid templated transcription GO:1903508 286 0.686
histone deacetylation GO:0016575 26 0.683
positive regulation of transcription from rna polymerase ii promoter in response to stress GO:0036003 33 0.671
meiotic cell cycle process GO:1903046 229 0.658
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.602
negative regulation of chromatin silencing at rdna GO:0061188 8 0.584
protein dna complex subunit organization GO:0071824 153 0.543
macromolecule deacylation GO:0098732 27 0.521
growth GO:0040007 157 0.504
chromatin silencing at silent mating type cassette GO:0030466 53 0.467
covalent chromatin modification GO:0016569 119 0.464
dna templated transcription elongation GO:0006354 91 0.436
negative regulation of gene silencing GO:0060969 27 0.431
dna repair GO:0006281 236 0.418
reproductive process GO:0022414 248 0.396
regulation of transcription from rna polymerase ii promoter in response to stress GO:0043618 51 0.386
protein acylation GO:0043543 66 0.375
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 38 0.364
negative regulation of chromatin silencing at silent mating type cassette GO:0061186 11 0.333
chromatin silencing at rdna GO:0000183 32 0.323
cellular response to dna damage stimulus GO:0006974 287 0.309
mitotic cell cycle process GO:1903047 294 0.308
regulation of dna templated transcription in response to stress GO:0043620 51 0.306
protein deacetylation GO:0006476 26 0.268
single organism developmental process GO:0044767 258 0.253
regulation of chromatin silencing at rdna GO:0061187 10 0.244
developmental process GO:0032502 261 0.242
cellular response to heat GO:0034605 53 0.219
anatomical structure morphogenesis GO:0009653 160 0.202
regulation of chromatin silencing at silent mating type cassette GO:0090054 13 0.196
meiotic cell cycle GO:0051321 272 0.192
peptidyl amino acid modification GO:0018193 116 0.191
organelle fission GO:0048285 272 0.185
meiotic nuclear division GO:0007126 163 0.182
protein acetylation GO:0006473 59 0.178
single organism reproductive process GO:0044702 159 0.177
peptidyl lysine modification GO:0018205 77 0.173
organic acid metabolic process GO:0006082 352 0.162
regulation of gene silencing GO:0060968 41 0.160
regulation of cell cycle process GO:0010564 150 0.159
signal transduction GO:0007165 208 0.156
Yeast
negative regulation of chromatin silencing GO:0031936 25 0.143
regulation of cellular component organization GO:0051128 334 0.140
regulation of meiosis GO:0040020 42 0.135
dna recombination GO:0006310 172 0.130
response to organic substance GO:0010033 182 0.129
regulation of filamentous growth of a population of unicellular organisms GO:1900428 36 0.125
response to chemical GO:0042221 390 0.124
anatomical structure development GO:0048856 160 0.122
regulation of filamentous growth GO:0010570 38 0.121
cell communication GO:0007154 345 0.120
negative regulation of cell cycle GO:0045786 91 0.114
double strand break repair GO:0006302 105 0.101
protein deacylation GO:0035601 27 0.100
response to heat GO:0009408 69 0.097
positive regulation of transcription from rna polymerase ii promoter in response to heat stress GO:0061408 12 0.093
invasive filamentous growth GO:0036267 65 0.091
signaling GO:0023052 208 0.089
Yeast
regulation of dna replication GO:0006275 51 0.089
mitotic cell cycle GO:0000278 306 0.088
multi organism reproductive process GO:0044703 216 0.087
peptidyl lysine acetylation GO:0018394 52 0.086
developmental process involved in reproduction GO:0003006 159 0.084
cell division GO:0051301 205 0.083
transcription from rna polymerase i promoter GO:0006360 63 0.081
internal peptidyl lysine acetylation GO:0018393 52 0.077
internal protein amino acid acetylation GO:0006475 52 0.076
mitotic cell cycle phase transition GO:0044772 141 0.072
response to nutrient levels GO:0031667 150 0.071
regulation of transcription from rna polymerase i promoter GO:0006356 36 0.066
negative regulation of organelle organization GO:0010639 103 0.066
nucleosome organization GO:0034728 63 0.066
replicative cell aging GO:0001302 46 0.065
sexual sporulation GO:0034293 113 0.062
regulation of response to stress GO:0080134 57 0.062
regulation of response to extracellular stimulus GO:0032104 20 0.062
protein transport GO:0015031 345 0.060
response to temperature stimulus GO:0009266 74 0.060
positive regulation of cellular component organization GO:0051130 116 0.059
cell aging GO:0007569 70 0.058
regulation of response to stimulus GO:0048583 157 0.058
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 40 0.058
ascospore formation GO:0030437 107 0.057
cell development GO:0048468 107 0.054
cellular response to organic substance GO:0071310 159 0.054
regulation of biological quality GO:0065008 391 0.053
multi organism process GO:0051704 233 0.050
histone acetylation GO:0016573 51 0.049
regulation of cellular ketone metabolic process GO:0010565 42 0.047
dna dependent dna replication GO:0006261 115 0.047
sexual sporulation resulting in formation of a cellular spore GO:0043935 113 0.047
regulation of protein metabolic process GO:0051246 237 0.046
nuclear division GO:0000280 263 0.044
cellular carbohydrate metabolic process GO:0044262 135 0.044
anatomical structure formation involved in morphogenesis GO:0048646 136 0.044
cellular response to external stimulus GO:0071496 150 0.043
negative regulation of cellular protein metabolic process GO:0032269 85 0.042
chemical homeostasis GO:0048878 137 0.041
cellular ketone metabolic process GO:0042180 63 0.041
filamentous growth GO:0030447 124 0.041
carboxylic acid biosynthetic process GO:0046394 152 0.040
response to extracellular stimulus GO:0009991 156 0.039
establishment of protein localization GO:0045184 367 0.038
regulation of cellular response to stress GO:0080135 50 0.037
sexual reproduction GO:0019953 216 0.036
intracellular protein transport GO:0006886 319 0.036
regulation of cell communication GO:0010646 124 0.036
cellular developmental process GO:0048869 191 0.035
single organism cellular localization GO:1902580 375 0.035
aging GO:0007568 71 0.035
positive regulation of protein metabolic process GO:0051247 93 0.035
amine metabolic process GO:0009308 51 0.035
regulation of dna templated transcription elongation GO:0032784 44 0.034
regulation of meiotic cell cycle GO:0051445 43 0.034
regulation of cellular amino acid metabolic process GO:0006521 16 0.033
growth of unicellular organism as a thread of attached cells GO:0070783 105 0.033
cellular lipid metabolic process GO:0044255 229 0.033
regulation of nuclear division GO:0051783 103 0.033
invasive growth in response to glucose limitation GO:0001403 61 0.033
regulation of organelle organization GO:0033043 243 0.033
peroxisome organization GO:0007031 68 0.032
positive regulation of growth GO:0045927 19 0.031
cellular response to chemical stimulus GO:0070887 315 0.030
reproductive process in single celled organism GO:0022413 145 0.030
organonitrogen compound biosynthetic process GO:1901566 314 0.030
response to abiotic stimulus GO:0009628 159 0.029
cellular response to starvation GO:0009267 90 0.029
negative regulation of dna metabolic process GO:0051053 36 0.028
positive regulation of dna templated transcription elongation GO:0032786 42 0.028
cell differentiation GO:0030154 161 0.026
single organism catabolic process GO:0044712 619 0.024
homeostatic process GO:0042592 227 0.024
dna replication initiation GO:0006270 48 0.024
lipid metabolic process GO:0006629 269 0.024
cellular macromolecule catabolic process GO:0044265 363 0.024
sporulation GO:0043934 132 0.023
negative regulation of transcription from rna polymerase i promoter GO:0016479 8 0.023
dna replication GO:0006260 147 0.022
oxoacid metabolic process GO:0043436 351 0.022
regulation of cellular amine metabolic process GO:0033238 21 0.022
protein targeting GO:0006605 272 0.021
regulation of cellular protein metabolic process GO:0032268 232 0.021
organic hydroxy compound metabolic process GO:1901615 125 0.021
regulation of dna dependent dna replication GO:0090329 37 0.020
regulation of molecular function GO:0065009 320 0.020
regulation of phosphorylation GO:0042325 86 0.019
Yeast
regulation of dna metabolic process GO:0051052 100 0.019
cation transport GO:0006812 166 0.018
regulation of developmental process GO:0050793 30 0.018
response to external stimulus GO:0009605 158 0.018
carbohydrate derivative metabolic process GO:1901135 549 0.018
mitochondrion organization GO:0007005 261 0.018
ion transport GO:0006811 274 0.017
filamentous growth of a population of unicellular organisms GO:0044182 109 0.017
regulation of cellular catabolic process GO:0031329 195 0.017
macromolecule catabolic process GO:0009057 383 0.017
lipid biosynthetic process GO:0008610 170 0.016
cellular homeostasis GO:0019725 138 0.016
multi organism cellular process GO:0044764 120 0.016
response to oxygen containing compound GO:1901700 61 0.015
monocarboxylic acid metabolic process GO:0032787 122 0.015
establishment of protein localization to organelle GO:0072594 278 0.015
regulation of phosphorus metabolic process GO:0051174 230 0.015
Yeast
regulation of transcription by chromatin organization GO:0034401 19 0.015
dna templated transcription initiation GO:0006352 71 0.014
sporulation resulting in formation of a cellular spore GO:0030435 129 0.014
cellular response to extracellular stimulus GO:0031668 150 0.014
cellular amino acid metabolic process GO:0006520 225 0.014
cellular amine metabolic process GO:0044106 51 0.014
transmembrane transport GO:0055085 349 0.014
protein dna complex assembly GO:0065004 105 0.012
endosomal transport GO:0016197 86 0.011
response to nutrient GO:0007584 52 0.011
carboxylic acid metabolic process GO:0019752 338 0.011
monocarboxylic acid biosynthetic process GO:0072330 35 0.011
ion homeostasis GO:0050801 118 0.011
protein alkylation GO:0008213 48 0.011
protein methylation GO:0006479 48 0.011
alcohol metabolic process GO:0006066 112 0.011
small molecule biosynthetic process GO:0044283 258 0.011
response to organic cyclic compound GO:0014070 1 0.010
positive regulation of organelle organization GO:0010638 85 0.010
vesicle mediated transport GO:0016192 335 0.010
negative regulation of protein metabolic process GO:0051248 85 0.010
positive regulation of cellular amine metabolic process GO:0033240 10 0.010

RPD3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org