|
|
positive regulation of transcription from rna polymerase ii promoter
|
GO:0045944 |
252 |
0.950
|
|
|
|
regulation of transcription from rna polymerase ii promoter
|
GO:0006357 |
394 |
0.897
|
|
|
|
positive regulation of rna metabolic process
|
GO:0051254 |
294 |
0.886
|
|
|
|
positive regulation of nucleobase containing compound metabolic process
|
GO:0045935 |
409 |
0.865
|
|
|
|
positive regulation of transcription dna templated
|
GO:0045893 |
286 |
0.698
|
|
|
|
positive regulation of macromolecule biosynthetic process
|
GO:0010557 |
325 |
0.698
|
|
|
|
positive regulation of nitrogen compound metabolic process
|
GO:0051173 |
412 |
0.671
|
|
|
|
positive regulation of rna biosynthetic process
|
GO:1902680 |
286 |
0.663
|
|
|
|
positive regulation of nucleic acid templated transcription
|
GO:1903508 |
286 |
0.628
|
|
|
|
negative regulation of gene expression
|
GO:0010629 |
312 |
0.431
|
|
|
|
negative regulation of macromolecule biosynthetic process
|
GO:0010558 |
291 |
0.418
|
|
|
|
negative regulation of cellular macromolecule biosynthetic process
|
GO:2000113 |
289 |
0.404
|
|
|
|
positive regulation of cellular biosynthetic process
|
GO:0031328 |
336 |
0.363
|
|
|
|
negative regulation of rna metabolic process
|
GO:0051253 |
262 |
0.311
|
|
|
|
positive regulation of gene expression
|
GO:0010628 |
321 |
0.298
|
|
|
|
response to nutrient levels
|
GO:0031667 |
150 |
0.297
|
|
|
|
cell communication
|
GO:0007154 |
345 |
0.252
|
|
|
|
negative regulation of nucleic acid templated transcription
|
GO:1903507 |
260 |
0.247
|
|
|
|
positive regulation of biosynthetic process
|
GO:0009891 |
336 |
0.243
|
|
|
|
positive regulation of macromolecule metabolic process
|
GO:0010604 |
394 |
0.209
|
|
|
|
negative regulation of cellular metabolic process
|
GO:0031324 |
407 |
0.208
|
|
|
|
negative regulation of transcription from rna polymerase ii promoter
|
GO:0000122 |
137 |
0.204
|
|
|
|
negative regulation of macromolecule metabolic process
|
GO:0010605 |
375 |
0.202
|
|
|
|
negative regulation of biosynthetic process
|
GO:0009890 |
312 |
0.200
|
|
|
|
negative regulation of cellular biosynthetic process
|
GO:0031327 |
312 |
0.190
|
|
|
|
carbon catabolite regulation of transcription
|
GO:0045990 |
39 |
0.150
|
|
|
|
negative regulation of rna biosynthetic process
|
GO:1902679 |
260 |
0.127
|
|
|
|
rna 3 end processing
|
GO:0031123 |
88 |
0.125
|
|
|
|
response to external stimulus
|
GO:0009605 |
158 |
0.117
|
|
|
|
cellular response to extracellular stimulus
|
GO:0031668 |
150 |
0.117
|
|
|
|
macromolecule catabolic process
|
GO:0009057 |
383 |
0.110
|
|
|
|
cellular response to nutrient levels
|
GO:0031669 |
144 |
0.110
|
|
|
|
response to chemical
|
GO:0042221 |
390 |
0.101
|
|
|
|
protein complex assembly
|
GO:0006461 |
302 |
0.101
|
|
|
|
cellular response to external stimulus
|
GO:0071496 |
150 |
0.099
|
|
|
|
protein catabolic process
|
GO:0030163 |
221 |
0.094
|
|
|
|
mrna metabolic process
|
GO:0016071 |
269 |
0.093
|
|
|
|
signaling
|
GO:0023052 |
208 |
0.087
|
|
|
|
response to nutrient
|
GO:0007584 |
52 |
0.086
|
|
|
|
negative regulation of nitrogen compound metabolic process
|
GO:0051172 |
300 |
0.085
|
|
|
|
positive regulation of transcription by galactose
|
GO:0000411 |
8 |
0.078
|
|
|
|
protein modification by small protein conjugation or removal
|
GO:0070647 |
172 |
0.077
|
|
|
|
fungal type cell wall organization
|
GO:0031505 |
145 |
0.075
|
|
|
|
organophosphate biosynthetic process
|
GO:0090407 |
182 |
0.073
|
|
|
|
cellular response to nutrient
|
GO:0031670 |
50 |
0.072
|
|
|
|
dna replication
|
GO:0006260 |
147 |
0.071
|
|
|
|
negative regulation of nucleobase containing compound metabolic process
|
GO:0045934 |
295 |
0.070
|
|
|
|
protein complex biogenesis
|
GO:0070271 |
314 |
0.069
|
|
|
|
meiotic cell cycle
|
GO:0051321 |
272 |
0.069
|
|
|
|
regulation of molecular function
|
GO:0065009 |
320 |
0.068
|
|
|
|
negative regulation of transcription dna templated
|
GO:0045892 |
258 |
0.068
|
|
|
|
mrna catabolic process
|
GO:0006402 |
93 |
0.067
|
|
|
|
purine nucleoside metabolic process
|
GO:0042278 |
380 |
0.064
|
|
|
|
ribonucleoside metabolic process
|
GO:0009119 |
389 |
0.062
|
|
|
|
cell wall organization
|
GO:0071555 |
146 |
0.054
|
|
|
|
growth of unicellular organism as a thread of attached cells
|
GO:0070783 |
105 |
0.053
|
|
|
|
aromatic compound catabolic process
|
GO:0019439 |
491 |
0.052
|
|
|
|
cellular response to chemical stimulus
|
GO:0070887 |
315 |
0.051
|
|
|
|
carbon catabolite activation of transcription from rna polymerase ii promoter
|
GO:0000436 |
22 |
0.051
|
|
|
|
meiotic nuclear division
|
GO:0007126 |
163 |
0.049
|
|
|
|
purine containing compound metabolic process
|
GO:0072521 |
400 |
0.048
|
|
|
|
cellular nitrogen compound catabolic process
|
GO:0044270 |
494 |
0.048
|
|
|
|
nuclear division
|
GO:0000280 |
263 |
0.047
|
|
|
|
organic acid biosynthetic process
|
GO:0016053 |
152 |
0.046
|
|
|
|
organelle fission
|
GO:0048285 |
272 |
0.046
|
|
|
|
external encapsulating structure organization
|
GO:0045229 |
146 |
0.045
|
|
|
|
response to extracellular stimulus
|
GO:0009991 |
156 |
0.044
|
|
|
|
organophosphate metabolic process
|
GO:0019637 |
597 |
0.043
|
|
|
|
cellular macromolecule catabolic process
|
GO:0044265 |
363 |
0.043
|
|
|
|
protein ubiquitination
|
GO:0016567 |
118 |
0.042
|
|
|
|
organic acid metabolic process
|
GO:0006082 |
352 |
0.042
|
|
|
|
cellular developmental process
|
GO:0048869 |
191 |
0.041
|
|
|
|
oxoacid metabolic process
|
GO:0043436 |
351 |
0.040
|
|
|
|
regulation of cellular component organization
|
GO:0051128 |
334 |
0.040
|
|
|
|
carbon catabolite activation of transcription
|
GO:0045991 |
26 |
0.039
|
|
|
|
carbohydrate metabolic process
|
GO:0005975 |
252 |
0.039
|
|
|
|
positive regulation of catalytic activity
|
GO:0043085 |
178 |
0.035
|
|
|
|
organic cyclic compound catabolic process
|
GO:1901361 |
499 |
0.035
|
|
|
|
positive regulation of transcription from rna polymerase ii promoter by galactose
|
GO:0000435 |
4 |
0.035
|
|
|
|
purine ribonucleotide metabolic process
|
GO:0009150 |
372 |
0.035
|
|
|
|
positive regulation of molecular function
|
GO:0044093 |
185 |
0.034
|
|
|
|
nucleoside phosphate metabolic process
|
GO:0006753 |
458 |
0.034
|
|
|
|
nucleic acid phosphodiester bond hydrolysis
|
GO:0090305 |
194 |
0.034
|
|
|
|
nucleobase containing small molecule metabolic process
|
GO:0055086 |
491 |
0.034
|
|
|
|
heterocycle catabolic process
|
GO:0046700 |
494 |
0.033
|
|
|
|
small molecule biosynthetic process
|
GO:0044283 |
258 |
0.032
|
|
|
|
covalent chromatin modification
|
GO:0016569 |
119 |
0.032
|
|
|
|
regulation of cell cycle process
|
GO:0010564 |
150 |
0.031
|
|
|
|
carbohydrate derivative catabolic process
|
GO:1901136 |
339 |
0.030
|
|
|
|
carbohydrate derivative metabolic process
|
GO:1901135 |
549 |
0.029
|
|
|
|
organophosphate catabolic process
|
GO:0046434 |
338 |
0.029
|
|
|
|
ribonucleoside triphosphate metabolic process
|
GO:0009199 |
356 |
0.028
|
|
|
|
fungal type cell wall organization or biogenesis
|
GO:0071852 |
169 |
0.028
|
|
|
|
protein modification by small protein conjugation
|
GO:0032446 |
144 |
0.027
|
|
|
|
carboxylic acid metabolic process
|
GO:0019752 |
338 |
0.027
|
|
|
|
filamentous growth of a population of unicellular organisms
|
GO:0044182 |
109 |
0.027
|
|
|
|
developmental process
|
GO:0032502 |
261 |
0.026
|
|
|
|
regulation of localization
|
GO:0032879 |
127 |
0.026
|
|
|
|
positive regulation of phosphorus metabolic process
|
GO:0010562 |
147 |
0.026
|
|
|
|
cell wall organization or biogenesis
|
GO:0071554 |
190 |
0.026
|
|
|
|
regulation of organelle organization
|
GO:0033043 |
243 |
0.026
|
|
|
|
cellular biogenic amine metabolic process
|
GO:0006576 |
37 |
0.026
|
|
|
|
nucleobase containing compound catabolic process
|
GO:0034655 |
479 |
0.026
|
|
|
|
peroxisome degradation
|
GO:0030242 |
22 |
0.025
|
|
|
|
ribonucleotide metabolic process
|
GO:0009259 |
377 |
0.025
|
|
|
|
glycosyl compound metabolic process
|
GO:1901657 |
398 |
0.024
|
|
|
|
nucleotide metabolic process
|
GO:0009117 |
453 |
0.024
|
|
|
|
rna catabolic process
|
GO:0006401 |
118 |
0.023
|
|
|
|
ribose phosphate metabolic process
|
GO:0019693 |
384 |
0.023
|
|
|
|
purine ribonucleoside metabolic process
|
GO:0046128 |
380 |
0.022
|
|
|
|
signal transduction
|
GO:0007165 |
208 |
0.022
|
|
|
|
amine metabolic process
|
GO:0009308 |
51 |
0.022
|
|
|
|
regulation of response to stimulus
|
GO:0048583 |
157 |
0.021
|
|
|
|
dna dependent dna replication
|
GO:0006261 |
115 |
0.021
|
|
|
|
mitochondrion organization
|
GO:0007005 |
261 |
0.021
|
|
|
|
nucleoside triphosphate metabolic process
|
GO:0009141 |
364 |
0.021
|
|
|
|
ribonucleoside catabolic process
|
GO:0042454 |
332 |
0.021
|
|
|
|
regulation of signal transduction
|
GO:0009966 |
114 |
0.021
|
|
|
|
response to abiotic stimulus
|
GO:0009628 |
159 |
0.021
|
|
|
|
posttranscriptional regulation of gene expression
|
GO:0010608 |
115 |
0.020
|
|
|
|
negative regulation of dna metabolic process
|
GO:0051053 |
36 |
0.020
|
|
|
|
proteolysis involved in cellular protein catabolic process
|
GO:0051603 |
198 |
0.020
|
|
|
|
mitotic cell cycle
|
GO:0000278 |
306 |
0.020
|
|
|
|
chromatin modification
|
GO:0016568 |
200 |
0.020
|
|
|
|
negative regulation of cell cycle process
|
GO:0010948 |
86 |
0.019
|
|
|
|
establishment of protein localization
|
GO:0045184 |
367 |
0.019
|
|
|
|
anatomical structure morphogenesis
|
GO:0009653 |
160 |
0.019
|
|
|
|
phospholipid metabolic process
|
GO:0006644 |
125 |
0.019
|
|
|
|
nucleoside phosphate catabolic process
|
GO:1901292 |
331 |
0.019
|
|
|
|
organonitrogen compound catabolic process
|
GO:1901565 |
404 |
0.019
|
|
|
|
regulation of cell cycle
|
GO:0051726 |
195 |
0.019
|
|
|
|
regulation of protein metabolic process
|
GO:0051246 |
237 |
0.018
|
|
|
|
nucleotide catabolic process
|
GO:0009166 |
330 |
0.018
|
|
|
|
carbon catabolite regulation of transcription from rna polymerase ii promoter
|
GO:0000429 |
34 |
0.018
|
|
|
|
purine nucleoside triphosphate metabolic process
|
GO:0009144 |
356 |
0.018
|
|
|
|
cellular ion homeostasis
|
GO:0006873 |
112 |
0.018
|
|
|
|
cellular amine metabolic process
|
GO:0044106 |
51 |
0.017
|
|
|
|
purine nucleotide metabolic process
|
GO:0006163 |
376 |
0.017
|
|
|
|
cellular protein catabolic process
|
GO:0044257 |
213 |
0.017
|
|
|
|
chromatin organization
|
GO:0006325 |
242 |
0.017
|
|
|
|
positive regulation of phosphate metabolic process
|
GO:0045937 |
147 |
0.016
|
|
|
|
single organism developmental process
|
GO:0044767 |
258 |
0.016
|
|
|
|
regulation of cellular catabolic process
|
GO:0031329 |
195 |
0.016
|
|
|
|
regulation of catabolic process
|
GO:0009894 |
199 |
0.016
|
|
|
|
chromosome segregation
|
GO:0007059 |
159 |
0.016
|
|
|
|
dna integrity checkpoint
|
GO:0031570 |
41 |
0.015
|
|
|
|
cellular response to topologically incorrect protein
|
GO:0035967 |
32 |
0.015
|
|
|
|
organic hydroxy compound metabolic process
|
GO:1901615 |
125 |
0.015
|
|
|
|
regulation of nuclear division
|
GO:0051783 |
103 |
0.015
|
|
|
|
positive regulation of dna templated transcription elongation
|
GO:0032786 |
42 |
0.015
|
|
|
|
lipid biosynthetic process
|
GO:0008610 |
170 |
0.015
|
|
|
|
organic hydroxy compound biosynthetic process
|
GO:1901617 |
81 |
0.015
|
|
|
|
purine nucleoside catabolic process
|
GO:0006152 |
330 |
0.014
|
|
|
|
protein complex disassembly
|
GO:0043241 |
70 |
0.014
|
|
|
|
regulation of cell communication
|
GO:0010646 |
124 |
0.014
|
|
|
|
histone modification
|
GO:0016570 |
119 |
0.013
|
|
|
|
glycerophospholipid metabolic process
|
GO:0006650 |
98 |
0.013
|
|
|
|
organonitrogen compound biosynthetic process
|
GO:1901566 |
314 |
0.013
|
|
|
|
cell differentiation
|
GO:0030154 |
161 |
0.013
|
|
|
|
regulation of mitotic cell cycle phase transition
|
GO:1901990 |
68 |
0.013
|
|
|
|
nitrogen compound transport
|
GO:0071705 |
212 |
0.013
|
|
|
|
cellular component disassembly
|
GO:0022411 |
86 |
0.013
|
|
|
|
microtubule cytoskeleton organization
|
GO:0000226 |
109 |
0.013
|
|
|
|
response to organic cyclic compound
|
GO:0014070 |
1 |
0.013
|
|
|
|
carbohydrate derivative biosynthetic process
|
GO:1901137 |
181 |
0.013
|
|
|
|
anion transport
|
GO:0006820 |
145 |
0.013
|
|
|
|
negative regulation of cell cycle
|
GO:0045786 |
91 |
0.013
|
|
|
|
ribonucleotide catabolic process
|
GO:0009261 |
327 |
0.013
|
|
|
|
cellular amino acid metabolic process
|
GO:0006520 |
225 |
0.013
|
|
|
|
cellular cation homeostasis
|
GO:0030003 |
100 |
0.012
|
|
|
|
regulation of phosphate metabolic process
|
GO:0019220 |
230 |
0.012
|
|
|
|
purine ribonucleoside triphosphate catabolic process
|
GO:0009207 |
327 |
0.012
|
|
|
|
mitotic cell cycle process
|
GO:1903047 |
294 |
0.012
|
|
|
|
filamentous growth
|
GO:0030447 |
124 |
0.012
|
|
|
|
positive regulation of transcription elongation from rna polymerase ii promoter
|
GO:0032968 |
38 |
0.012
|
|
|
|
single organism signaling
|
GO:0044700 |
208 |
0.012
|
|
|
|
sexual reproduction
|
GO:0019953 |
216 |
0.012
|
|
|
|
proteolysis
|
GO:0006508 |
268 |
0.012
|
|
|
|
regulation of cell cycle phase transition
|
GO:1901987 |
70 |
0.012
|
|
|
|
nucleoside monophosphate metabolic process
|
GO:0009123 |
267 |
0.012
|
|
|
|
ion homeostasis
|
GO:0050801 |
118 |
0.012
|
|
|
|
positive regulation of catabolic process
|
GO:0009896 |
135 |
0.012
|
|
|
|
protein dna complex assembly
|
GO:0065004 |
105 |
0.012
|
|
|
|
negative regulation of cell communication
|
GO:0010648 |
33 |
0.011
|
|
|
|
response to topologically incorrect protein
|
GO:0035966 |
38 |
0.011
|
|
|
|
ribonucleoside triphosphate catabolic process
|
GO:0009203 |
327 |
0.011
|
|
|
|
purine ribonucleoside triphosphate metabolic process
|
GO:0009205 |
354 |
0.011
|
|
|
|
ribonucleoside monophosphate metabolic process
|
GO:0009161 |
265 |
0.011
|
|
|
|
protein dna complex subunit organization
|
GO:0071824 |
153 |
0.011
|
|
|
|
dna recombination
|
GO:0006310 |
172 |
0.011
|
|
|
|
nucleoside triphosphate catabolic process
|
GO:0009143 |
329 |
0.011
|
|
|
|
cellular homeostasis
|
GO:0019725 |
138 |
0.011
|
|
|
|
invasive growth in response to glucose limitation
|
GO:0001403 |
61 |
0.011
|
|
|
|
homeostatic process
|
GO:0042592 |
227 |
0.011
|
|
|
|
regulation of cellular protein metabolic process
|
GO:0032268 |
232 |
0.010
|
|
|
|
regulation of transcription from rna polymerase ii promoter in response to stress
|
GO:0043618 |
51 |
0.010
|
|
|
|
invasive filamentous growth
|
GO:0036267 |
65 |
0.010
|
|
|
|
alcohol metabolic process
|
GO:0006066 |
112 |
0.010
|
|
|
|
microtubule organizing center organization
|
GO:0031023 |
33 |
0.010
|
|
|
|
phosphorylation
|
GO:0016310 |
291 |
0.010
|
|