Saccharomyces cerevisiae

44 known processes

VTC4 (YJL012C)

Vtc4p

(Aliases: PHM3,YJL012C-A)

VTC4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
polyphosphate metabolic process GO:0006797 12 0.802
single organism membrane invagination GO:1902534 43 0.658
oxoacid metabolic process GO:0043436 351 0.622
membrane invagination GO:0010324 43 0.581
organelle fusion GO:0048284 85 0.490
organic acid metabolic process GO:0006082 352 0.486
single organism membrane fusion GO:0044801 71 0.427
autophagy GO:0006914 106 0.419
vacuolar transport GO:0007034 145 0.370
membrane fusion GO:0061025 73 0.359
single organism membrane organization GO:0044802 275 0.352
vacuole organization GO:0007033 75 0.309
single organism catabolic process GO:0044712 619 0.296
vacuole fusion non autophagic GO:0042144 40 0.247
anion transport GO:0006820 145 0.209
meiotic nuclear division GO:0007126 163 0.205
detection of monosaccharide stimulus GO:0034287 3 0.199
detection of glucose GO:0051594 3 0.183
negative regulation of organelle organization GO:0010639 103 0.129
protein transport GO:0015031 345 0.125
response to organic substance GO:0010033 182 0.123
response to chemical GO:0042221 390 0.119
vacuole fusion GO:0097576 40 0.117
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.116
detection of stimulus GO:0051606 4 0.109
membrane organization GO:0061024 276 0.108
detection of carbohydrate stimulus GO:0009730 3 0.106
ion transport GO:0006811 274 0.100
regulation of cellular component organization GO:0051128 334 0.099
transition metal ion transport GO:0000041 45 0.099
positive regulation of macromolecule metabolic process GO:0010604 394 0.099
translation GO:0006412 230 0.098
detection of hexose stimulus GO:0009732 3 0.096
positive regulation of biosynthetic process GO:0009891 336 0.084
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.081
positive regulation of rna biosynthetic process GO:1902680 286 0.080
organophosphate metabolic process GO:0019637 597 0.078
detection of chemical stimulus GO:0009593 3 0.076
positive regulation of cellular biosynthetic process GO:0031328 336 0.074
positive regulation of nucleic acid templated transcription GO:1903508 286 0.072
regulation of biological quality GO:0065008 391 0.071
carbohydrate transport GO:0008643 33 0.069
negative regulation of cellular metabolic process GO:0031324 407 0.067
aromatic compound catabolic process GO:0019439 491 0.065
protein complex assembly GO:0006461 302 0.064
positive regulation of gene expression GO:0010628 321 0.064
heterocycle catabolic process GO:0046700 494 0.063
regulation of cell division GO:0051302 113 0.061
response to oxygen containing compound GO:1901700 61 0.061
regulation of organelle organization GO:0033043 243 0.060
lipid transport GO:0006869 58 0.058
negative regulation of nuclear division GO:0051784 62 0.057
er to golgi vesicle mediated transport GO:0006888 86 0.056
ion transmembrane transport GO:0034220 200 0.054
modification dependent macromolecule catabolic process GO:0043632 203 0.054
protein complex biogenesis GO:0070271 314 0.053
organic cyclic compound catabolic process GO:1901361 499 0.053
plasma membrane selenite transport GO:0097080 3 0.052
establishment of protein localization to vacuole GO:0072666 91 0.051
metal ion transport GO:0030001 75 0.050
transmembrane transport GO:0055085 349 0.050
positive regulation of transcription dna templated GO:0045893 286 0.050
hexose transport GO:0008645 24 0.049
protein modification by small protein conjugation or removal GO:0070647 172 0.048
meiotic cell cycle GO:0051321 272 0.047
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.047
positive regulation of rna metabolic process GO:0051254 294 0.047
regulation of cell cycle GO:0051726 195 0.046
alcohol metabolic process GO:0006066 112 0.046
anion transmembrane transport GO:0098656 79 0.044
cellular response to chemical stimulus GO:0070887 315 0.044
glucose transport GO:0015758 23 0.043
negative regulation of biosynthetic process GO:0009890 312 0.043
glycosyl compound catabolic process GO:1901658 335 0.042
inorganic ion transmembrane transport GO:0098660 109 0.042
organic acid biosynthetic process GO:0016053 152 0.042
mannose transport GO:0015761 11 0.041
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.041
ribonucleoprotein complex subunit organization GO:0071826 152 0.040
inorganic anion transport GO:0015698 30 0.040
single organism developmental process GO:0044767 258 0.040
cellular nitrogen compound catabolic process GO:0044270 494 0.040
cellular amino acid biosynthetic process GO:0008652 118 0.039
negative regulation of cell cycle process GO:0010948 86 0.039
proteolysis involved in cellular protein catabolic process GO:0051603 198 0.039
negative regulation of meiosis GO:0045835 23 0.038
ubiquitin dependent protein catabolic process GO:0006511 181 0.038
carboxylic acid metabolic process GO:0019752 338 0.038
ribonucleotide metabolic process GO:0009259 377 0.037
vesicle mediated transport GO:0016192 335 0.037
organelle assembly GO:0070925 118 0.037
intracellular protein transport GO:0006886 319 0.037
ribonucleoside metabolic process GO:0009119 389 0.037
ncrna processing GO:0034470 330 0.037
mitochondrion organization GO:0007005 261 0.036
cellular macromolecule catabolic process GO:0044265 363 0.036
cellular response to dna damage stimulus GO:0006974 287 0.036
purine containing compound metabolic process GO:0072521 400 0.036
cytoplasmic translation GO:0002181 65 0.036
response to hexose GO:0009746 13 0.036
cation homeostasis GO:0055080 105 0.035
small molecule biosynthetic process GO:0044283 258 0.035
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.035
misfolded or incompletely synthesized protein catabolic process GO:0006515 21 0.035
regulation of cellular catabolic process GO:0031329 195 0.034
ribonucleoside catabolic process GO:0042454 332 0.034
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.034
glycosyl compound metabolic process GO:1901657 398 0.034
carbohydrate derivative metabolic process GO:1901135 549 0.034
establishment of protein localization GO:0045184 367 0.034
modification dependent protein catabolic process GO:0019941 181 0.034
nucleoside metabolic process GO:0009116 394 0.034
regulation of cellular protein metabolic process GO:0032268 232 0.034
purine nucleotide catabolic process GO:0006195 328 0.034
positive regulation of catabolic process GO:0009896 135 0.034
nucleobase containing compound catabolic process GO:0034655 479 0.033
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.033
negative regulation of macromolecule metabolic process GO:0010605 375 0.033
ribonucleoprotein complex assembly GO:0022618 143 0.033
developmental process GO:0032502 261 0.033
regulation of nuclear division GO:0051783 103 0.032
organophosphate catabolic process GO:0046434 338 0.032
purine ribonucleotide catabolic process GO:0009154 327 0.032
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.032
nuclear division GO:0000280 263 0.032
single organism cellular localization GO:1902580 375 0.032
protein targeting GO:0006605 272 0.031
organic hydroxy compound metabolic process GO:1901615 125 0.031
purine ribonucleoside catabolic process GO:0046130 330 0.031
cell division GO:0051301 205 0.031
rrna processing GO:0006364 227 0.031
nucleoside phosphate metabolic process GO:0006753 458 0.031
histone modification GO:0016570 119 0.031
protein catabolic process GO:0030163 221 0.031
alcohol biosynthetic process GO:0046165 75 0.031
carbohydrate derivative catabolic process GO:1901136 339 0.030
cellular response to organic substance GO:0071310 159 0.030
rrna metabolic process GO:0016072 244 0.030
nitrogen compound transport GO:0071705 212 0.030
cellular protein catabolic process GO:0044257 213 0.030
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.030
nucleobase containing small molecule metabolic process GO:0055086 491 0.030
covalent chromatin modification GO:0016569 119 0.029
purine nucleotide metabolic process GO:0006163 376 0.029
purine ribonucleoside metabolic process GO:0046128 380 0.029
response to glucose GO:0009749 13 0.029
negative regulation of rna biosynthetic process GO:1902679 260 0.028
negative regulation of cellular component organization GO:0051129 109 0.028
negative regulation of gene expression GO:0010629 312 0.028
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.028
small molecule catabolic process GO:0044282 88 0.028
nucleoside triphosphate metabolic process GO:0009141 364 0.028
ribonucleotide catabolic process GO:0009261 327 0.028
lipid localization GO:0010876 60 0.028
protein modification by small protein conjugation GO:0032446 144 0.027
sulfur compound metabolic process GO:0006790 95 0.027
regulation of cell cycle process GO:0010564 150 0.027
nucleotide metabolic process GO:0009117 453 0.027
negative regulation of cellular biosynthetic process GO:0031327 312 0.026
cellular amino acid metabolic process GO:0006520 225 0.026
purine ribonucleotide metabolic process GO:0009150 372 0.026
purine nucleoside triphosphate metabolic process GO:0009144 356 0.026
cellular response to extracellular stimulus GO:0031668 150 0.026
ribonucleoside triphosphate metabolic process GO:0009199 356 0.026
homeostatic process GO:0042592 227 0.026
transition metal ion homeostasis GO:0055076 59 0.026
organic hydroxy compound transport GO:0015850 41 0.025
organelle fission GO:0048285 272 0.025
cellular protein complex assembly GO:0043623 209 0.025
purine containing compound catabolic process GO:0072523 332 0.025
organonitrogen compound catabolic process GO:1901565 404 0.025
negative regulation of transcription dna templated GO:0045892 258 0.025
ribose phosphate metabolic process GO:0019693 384 0.025
regulation of catabolic process GO:0009894 199 0.025
maturation of 5 8s rrna GO:0000460 80 0.024
cellular metal ion homeostasis GO:0006875 78 0.024
organic anion transport GO:0015711 114 0.024
nucleoside catabolic process GO:0009164 335 0.024
regulation of molecular function GO:0065009 320 0.024
ribosome biogenesis GO:0042254 335 0.024
cellular transition metal ion homeostasis GO:0046916 59 0.024
trna metabolic process GO:0006399 151 0.024
organic hydroxy compound biosynthetic process GO:1901617 81 0.024
multi organism reproductive process GO:0044703 216 0.024
protein targeting to vacuole GO:0006623 91 0.024
purine nucleoside metabolic process GO:0042278 380 0.024
negative regulation of rna metabolic process GO:0051253 262 0.023
protein ubiquitination GO:0016567 118 0.023
purine nucleoside triphosphate catabolic process GO:0009146 329 0.023
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.023
regulation of localization GO:0032879 127 0.023
anatomical structure morphogenesis GO:0009653 160 0.023
rna phosphodiester bond hydrolysis endonucleolytic GO:0090502 79 0.023
nucleoside phosphate catabolic process GO:1901292 331 0.022
macromolecule catabolic process GO:0009057 383 0.022
negative regulation of nucleic acid templated transcription GO:1903507 260 0.022
organelle localization GO:0051640 128 0.022
regulation of signaling GO:0023051 119 0.022
lipid metabolic process GO:0006629 269 0.022
protein localization to organelle GO:0033365 337 0.021
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.021
monovalent inorganic cation transport GO:0015672 78 0.021
cytoskeleton organization GO:0007010 230 0.021
positive regulation of cellular catabolic process GO:0031331 128 0.021
cellular ion homeostasis GO:0006873 112 0.021
response to monosaccharide GO:0034284 13 0.021
ion homeostasis GO:0050801 118 0.021
establishment of protein localization to organelle GO:0072594 278 0.021
cellular chemical homeostasis GO:0055082 123 0.020
negative regulation of gene expression epigenetic GO:0045814 147 0.020
ribonucleoside triphosphate catabolic process GO:0009203 327 0.020
signal transduction GO:0007165 208 0.020
carboxylic acid biosynthetic process GO:0046394 152 0.020
regulation of protein metabolic process GO:0051246 237 0.020
reproduction of a single celled organism GO:0032505 191 0.020
golgi vesicle transport GO:0048193 188 0.020
regulation of phosphate metabolic process GO:0019220 230 0.020
nucleotide catabolic process GO:0009166 330 0.019
cation transmembrane transport GO:0098655 135 0.019
regulation of transport GO:0051049 85 0.019
positive regulation of catalytic activity GO:0043085 178 0.019
response to oxidative stress GO:0006979 99 0.019
nucleoside triphosphate catabolic process GO:0009143 329 0.019
ribosome assembly GO:0042255 57 0.019
cellular ketone metabolic process GO:0042180 63 0.019
response to external stimulus GO:0009605 158 0.019
endosomal transport GO:0016197 86 0.019
guanosine containing compound catabolic process GO:1901069 109 0.019
single organism signaling GO:0044700 208 0.019
posttranscriptional regulation of gene expression GO:0010608 115 0.019
nuclear transport GO:0051169 165 0.019
positive regulation of cellular component organization GO:0051130 116 0.019
regulation of gtp catabolic process GO:0033124 84 0.018
purine nucleoside catabolic process GO:0006152 330 0.018
ncrna 5 end processing GO:0034471 32 0.018
growth of unicellular organism as a thread of attached cells GO:0070783 105 0.018
gtp catabolic process GO:0006184 107 0.018
cell communication GO:0007154 345 0.018
cellular response to oxidative stress GO:0034599 94 0.018
dephosphorylation GO:0016311 127 0.018
regulation of meiotic cell cycle GO:0051445 43 0.018
sterol transport GO:0015918 24 0.018
phospholipid metabolic process GO:0006644 125 0.017
cleavage involved in rrna processing GO:0000469 69 0.017
reproductive process GO:0022414 248 0.017
organophosphate ester transport GO:0015748 45 0.017
cell growth GO:0016049 89 0.017
cation transport GO:0006812 166 0.017
growth GO:0040007 157 0.017
positive regulation of gtpase activity GO:0043547 80 0.017
mitotic cell cycle process GO:1903047 294 0.017
positive regulation of phosphorus metabolic process GO:0010562 147 0.017
cellular amine metabolic process GO:0044106 51 0.017
carboxylic acid transport GO:0046942 74 0.017
regulation of protein complex assembly GO:0043254 77 0.016
ribosomal small subunit biogenesis GO:0042274 124 0.016
sexual reproduction GO:0019953 216 0.016
cellular response to topologically incorrect protein GO:0035967 32 0.016
ras protein signal transduction GO:0007265 29 0.016
response to organic cyclic compound GO:0014070 1 0.016
regulation of nucleoside metabolic process GO:0009118 106 0.016
chromatin silencing at silent mating type cassette GO:0030466 53 0.016
cellular modified amino acid metabolic process GO:0006575 51 0.016
membrane lipid biosynthetic process GO:0046467 54 0.016
cellular homeostasis GO:0019725 138 0.016
rna splicing GO:0008380 131 0.016
single organism reproductive process GO:0044702 159 0.016
rna 5 end processing GO:0000966 33 0.016
nucleobase containing compound transport GO:0015931 124 0.016
regulation of catalytic activity GO:0050790 307 0.016
actin filament based process GO:0030029 104 0.016
response to extracellular stimulus GO:0009991 156 0.016
regulation of translation GO:0006417 89 0.015
cellular component morphogenesis GO:0032989 97 0.015
chromatin modification GO:0016568 200 0.015
positive regulation of molecular function GO:0044093 185 0.015
organic acid transport GO:0015849 77 0.015
multi organism process GO:0051704 233 0.015
cellular response to external stimulus GO:0071496 150 0.015
sphingolipid metabolic process GO:0006665 41 0.015
positive regulation of purine nucleotide metabolic process GO:1900544 100 0.015
positive regulation of nucleoside metabolic process GO:0045979 97 0.015
cell differentiation GO:0030154 161 0.015
invasive filamentous growth GO:0036267 65 0.015
single organism carbohydrate metabolic process GO:0044723 237 0.015
reproductive process in single celled organism GO:0022413 145 0.015
developmental process involved in reproduction GO:0003006 159 0.015
cellular biogenic amine metabolic process GO:0006576 37 0.014
actin cytoskeleton organization GO:0030036 100 0.014
filamentous growth GO:0030447 124 0.014
anatomical structure development GO:0048856 160 0.014
positive regulation of organelle organization GO:0010638 85 0.014
cellular cation homeostasis GO:0030003 100 0.014
organonitrogen compound biosynthetic process GO:1901566 314 0.014
nuclear export GO:0051168 124 0.014
pseudohyphal growth GO:0007124 75 0.014
ribonucleoside monophosphate metabolic process GO:0009161 265 0.014
response to topologically incorrect protein GO:0035966 38 0.014
intracellular signal transduction GO:0035556 112 0.014
actin filament organization GO:0007015 56 0.014
protein polymerization GO:0051258 51 0.014
regulation of metal ion transport GO:0010959 2 0.014
monocarboxylic acid metabolic process GO:0032787 122 0.013
amine metabolic process GO:0009308 51 0.013
regulation of gtpase activity GO:0043087 84 0.013
response to inorganic substance GO:0010035 47 0.013
proteasomal protein catabolic process GO:0010498 141 0.013
chromatin organization GO:0006325 242 0.013
regulation of signal transduction GO:0009966 114 0.013
regulation of gene expression epigenetic GO:0040029 147 0.013
translational elongation GO:0006414 32 0.013
cofactor metabolic process GO:0051186 126 0.013
gtp metabolic process GO:0046039 107 0.013
maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000466 80 0.013
regulation of response to stimulus GO:0048583 157 0.013
negative regulation of protein metabolic process GO:0051248 85 0.013
positive regulation of apoptotic process GO:0043065 3 0.013
rna methylation GO:0001510 39 0.013
rrna containing ribonucleoprotein complex export from nucleus GO:0071428 46 0.013
regulation of protein modification process GO:0031399 110 0.013
cellular lipid metabolic process GO:0044255 229 0.013
polyol biosynthetic process GO:0046173 13 0.013
single organism carbohydrate catabolic process GO:0044724 73 0.013
regulation of cellular component biogenesis GO:0044087 112 0.013
regulation of small gtpase mediated signal transduction GO:0051056 47 0.012
energy derivation by oxidation of organic compounds GO:0015980 125 0.012
cellular developmental process GO:0048869 191 0.012
dna templated transcription termination GO:0006353 42 0.012
regulation of purine nucleotide catabolic process GO:0033121 106 0.012
carbohydrate derivative transport GO:1901264 27 0.012
response to nutrient levels GO:0031667 150 0.012
regulation of cellular ketone metabolic process GO:0010565 42 0.012
ergosterol metabolic process GO:0008204 31 0.012
regulation of carbohydrate biosynthetic process GO:0043255 31 0.012
carbohydrate metabolic process GO:0005975 252 0.012
positive regulation of protein metabolic process GO:0051247 93 0.012
coenzyme metabolic process GO:0006732 104 0.012
regulation of meiosis GO:0040020 42 0.012
coenzyme biosynthetic process GO:0009108 66 0.012
rna phosphodiester bond hydrolysis GO:0090501 112 0.012
rna localization GO:0006403 112 0.012
regulation of purine nucleotide metabolic process GO:1900542 109 0.012
rrna 5 end processing GO:0000967 32 0.012
rna transport GO:0050658 92 0.012
response to abiotic stimulus GO:0009628 159 0.012
ribosome localization GO:0033750 46 0.012
regulation of transcription from rna polymerase ii promoter in response to stress GO:0043618 51 0.012
metal ion homeostasis GO:0055065 79 0.012
purine nucleoside monophosphate metabolic process GO:0009126 262 0.012
positive regulation of nucleotide metabolic process GO:0045981 101 0.012
sulfur compound biosynthetic process GO:0044272 53 0.012
purine ribonucleoside monophosphate catabolic process GO:0009169 224 0.011
endocytosis GO:0006897 90 0.011
regulation of lipid biosynthetic process GO:0046890 32 0.011
mitochondrial translation GO:0032543 52 0.011
nucleocytoplasmic transport GO:0006913 163 0.011
positive regulation of cellular protein metabolic process GO:0032270 89 0.011
chromatin silencing at rdna GO:0000183 32 0.011
cellular component disassembly GO:0022411 86 0.011
negative regulation of cellular protein metabolic process GO:0032269 85 0.011
divalent inorganic cation homeostasis GO:0072507 21 0.011
positive regulation of hydrolase activity GO:0051345 112 0.011
regulation of mrna splicing via spliceosome GO:0048024 3 0.011
regulation of nucleotide metabolic process GO:0006140 110 0.011
dna repair GO:0006281 236 0.011
positive regulation of lipid catabolic process GO:0050996 4 0.011
nucleoside monophosphate catabolic process GO:0009125 224 0.011
dna recombination GO:0006310 172 0.011
positive regulation of purine nucleotide catabolic process GO:0033123 97 0.011
filamentous growth of a population of unicellular organisms GO:0044182 109 0.011
positive regulation of cell death GO:0010942 3 0.011
response to temperature stimulus GO:0009266 74 0.011
establishment of organelle localization GO:0051656 96 0.011
gene silencing GO:0016458 151 0.011
aging GO:0007568 71 0.011
late endosome to vacuole transport GO:0045324 42 0.011
anatomical structure formation involved in morphogenesis GO:0048646 136 0.011
generation of precursor metabolites and energy GO:0006091 147 0.011
cell cycle checkpoint GO:0000075 82 0.011
ribonucleoprotein complex localization GO:0071166 46 0.011
maturation of ssu rrna GO:0030490 105 0.011
positive regulation of phosphate metabolic process GO:0045937 147 0.011
endonucleolytic cleavage involved in rrna processing GO:0000478 47 0.011
regulation of proteolysis GO:0030162 44 0.010
negative regulation of cell cycle GO:0045786 91 0.010
cellular response to zinc ion starvation GO:0034224 3 0.010
conjugation GO:0000746 107 0.010
chemical homeostasis GO:0048878 137 0.010
rna catabolic process GO:0006401 118 0.010
cellular protein complex disassembly GO:0043624 42 0.010
mitotic cell cycle GO:0000278 306 0.010
protein localization to vacuole GO:0072665 92 0.010
membrane lipid metabolic process GO:0006643 67 0.010
regulation of rna splicing GO:0043484 3 0.010
mrna metabolic process GO:0016071 269 0.010
cell aging GO:0007569 70 0.010
cell development GO:0048468 107 0.010
ribosomal subunit export from nucleus GO:0000054 46 0.010
response to hypoxia GO:0001666 4 0.010

VTC4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.024