Saccharomyces cerevisiae

43 known processes

PPM2 (YOL141W)

Ppm2p

(Aliases: TYW4)

PPM2 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.325
ribosome biogenesis GO:0042254 335 0.273
rrna metabolic process GO:0016072 244 0.270
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.220
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.216
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.205
negative regulation of gene expression GO:0010629 312 0.181
generation of precursor metabolites and energy GO:0006091 147 0.165
positive regulation of transcription dna templated GO:0045893 286 0.147
small molecule biosynthetic process GO:0044283 258 0.146
organic acid metabolic process GO:0006082 352 0.144
positive regulation of biosynthetic process GO:0009891 336 0.138
negative regulation of cellular biosynthetic process GO:0031327 312 0.136
positive regulation of gene expression GO:0010628 321 0.136
negative regulation of transcription dna templated GO:0045892 258 0.132
nucleobase containing small molecule metabolic process GO:0055086 491 0.121
negative regulation of macromolecule metabolic process GO:0010605 375 0.119
oxoacid metabolic process GO:0043436 351 0.119
negative regulation of cellular metabolic process GO:0031324 407 0.116
positive regulation of rna biosynthetic process GO:1902680 286 0.113
positive regulation of rna metabolic process GO:0051254 294 0.112
purine nucleoside metabolic process GO:0042278 380 0.111
carboxylic acid metabolic process GO:0019752 338 0.107
glycosyl compound metabolic process GO:1901657 398 0.104
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.103
macromolecule methylation GO:0043414 85 0.099
organonitrogen compound biosynthetic process GO:1901566 314 0.099
negative regulation of gene expression epigenetic GO:0045814 147 0.096
single organism catabolic process GO:0044712 619 0.096
cellular respiration GO:0045333 82 0.095
purine ribonucleoside metabolic process GO:0046128 380 0.092
positive regulation of cellular biosynthetic process GO:0031328 336 0.090
positive regulation of nucleic acid templated transcription GO:1903508 286 0.090
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.090
ribonucleoside metabolic process GO:0009119 389 0.085
aerobic respiration GO:0009060 55 0.080
carbohydrate derivative biosynthetic process GO:1901137 181 0.080
positive regulation of macromolecule metabolic process GO:0010604 394 0.078
rrna modification GO:0000154 19 0.078
negative regulation of rna biosynthetic process GO:1902679 260 0.078
gene silencing GO:0016458 151 0.078
mrna metabolic process GO:0016071 269 0.075
rrna processing GO:0006364 227 0.072
nucleocytoplasmic transport GO:0006913 163 0.072
negative regulation of biosynthetic process GO:0009890 312 0.071
ncrna processing GO:0034470 330 0.071
purine containing compound metabolic process GO:0072521 400 0.070
mitotic cell cycle process GO:1903047 294 0.067
carboxylic acid biosynthetic process GO:0046394 152 0.067
methylation GO:0032259 101 0.067
organic acid biosynthetic process GO:0016053 152 0.065
nucleoside metabolic process GO:0009116 394 0.064
nucleotide metabolic process GO:0009117 453 0.062
organophosphate metabolic process GO:0019637 597 0.061
cofactor metabolic process GO:0051186 126 0.059
nuclear export GO:0051168 124 0.058
lipid metabolic process GO:0006629 269 0.057
regulation of biological quality GO:0065008 391 0.056
single organism carbohydrate metabolic process GO:0044723 237 0.056
organonitrogen compound catabolic process GO:1901565 404 0.055
nucleobase containing compound catabolic process GO:0034655 479 0.055
maturation of 5 8s rrna GO:0000460 80 0.054
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.053
sulfur compound metabolic process GO:0006790 95 0.053
regulation of mitotic cell cycle GO:0007346 107 0.053
regulation of cellular catabolic process GO:0031329 195 0.052
establishment of protein localization to membrane GO:0090150 99 0.050
regulation of molecular function GO:0065009 320 0.048
negative regulation of rna metabolic process GO:0051253 262 0.046
cell communication GO:0007154 345 0.046
mrna processing GO:0006397 185 0.045
heterocycle catabolic process GO:0046700 494 0.045
cytokinesis GO:0000910 92 0.044
ribonucleoside biosynthetic process GO:0042455 37 0.044
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.044
protein transport GO:0015031 345 0.043
rna phosphodiester bond hydrolysis endonucleolytic GO:0090502 79 0.043
sporulation resulting in formation of a cellular spore GO:0030435 129 0.042
cellular macromolecule catabolic process GO:0044265 363 0.041
chromatin silencing GO:0006342 147 0.041
negative regulation of nucleic acid templated transcription GO:1903507 260 0.039
carboxylic acid catabolic process GO:0046395 71 0.038
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.038
coenzyme metabolic process GO:0006732 104 0.037
ribonucleoside catabolic process GO:0042454 332 0.037
purine nucleotide catabolic process GO:0006195 328 0.037
cellular lipid metabolic process GO:0044255 229 0.036
glycosyl compound catabolic process GO:1901658 335 0.035
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.035
alpha amino acid biosynthetic process GO:1901607 91 0.034
single organism cellular localization GO:1902580 375 0.034
regulation of gene silencing GO:0060968 41 0.033
ribosomal small subunit biogenesis GO:0042274 124 0.033
regulation of cell cycle process GO:0010564 150 0.033
nucleoside phosphate metabolic process GO:0006753 458 0.033
ribonucleotide metabolic process GO:0009259 377 0.033
regulation of dna metabolic process GO:0051052 100 0.032
small molecule catabolic process GO:0044282 88 0.032
homeostatic process GO:0042592 227 0.032
sexual reproduction GO:0019953 216 0.032
multi organism reproductive process GO:0044703 216 0.031
nitrogen compound transport GO:0071705 212 0.031
single organism signaling GO:0044700 208 0.031
nuclear transport GO:0051169 165 0.030
organelle fission GO:0048285 272 0.030
response to chemical GO:0042221 390 0.030
organelle localization GO:0051640 128 0.030
sulfur compound biosynthetic process GO:0044272 53 0.030
membrane organization GO:0061024 276 0.030
rna phosphodiester bond hydrolysis GO:0090501 112 0.030
regulation of filamentous growth GO:0010570 38 0.030
alcohol metabolic process GO:0006066 112 0.030
signal transduction GO:0007165 208 0.030
sporulation GO:0043934 132 0.029
amine metabolic process GO:0009308 51 0.029
regulation of cellular protein metabolic process GO:0032268 232 0.029
ribonucleoprotein complex subunit organization GO:0071826 152 0.029
organic hydroxy compound biosynthetic process GO:1901617 81 0.029
regulation of gene expression epigenetic GO:0040029 147 0.029
rna methylation GO:0001510 39 0.029
cellular modified amino acid metabolic process GO:0006575 51 0.028
mitotic cell cycle GO:0000278 306 0.028
cytokinetic process GO:0032506 78 0.028
protein localization to membrane GO:0072657 102 0.028
organic acid catabolic process GO:0016054 71 0.027
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.027
maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000466 80 0.027
protein complex assembly GO:0006461 302 0.027
positive regulation of catalytic activity GO:0043085 178 0.027
cellular response to starvation GO:0009267 90 0.027
vesicle mediated transport GO:0016192 335 0.026
ribose phosphate metabolic process GO:0019693 384 0.026
regulation of cell cycle GO:0051726 195 0.026
regulation of catabolic process GO:0009894 199 0.026
positive regulation of molecular function GO:0044093 185 0.026
cellular response to extracellular stimulus GO:0031668 150 0.026
carbohydrate derivative catabolic process GO:1901136 339 0.026
establishment of organelle localization GO:0051656 96 0.026
nuclear transcribed mrna catabolic process GO:0000956 89 0.026
purine containing compound biosynthetic process GO:0072522 53 0.026
mitotic cytokinesis GO:0000281 58 0.026
invasive filamentous growth GO:0036267 65 0.026
carbohydrate catabolic process GO:0016052 77 0.025
aromatic compound catabolic process GO:0019439 491 0.025
cell division GO:0051301 205 0.025
reproductive process GO:0022414 248 0.025
purine ribonucleoside catabolic process GO:0046130 330 0.025
chromatin modification GO:0016568 200 0.025
cellular chemical homeostasis GO:0055082 123 0.025
signaling GO:0023052 208 0.025
cellular response to external stimulus GO:0071496 150 0.025
mitotic cell cycle phase transition GO:0044772 141 0.025
response to nutrient levels GO:0031667 150 0.025
cellular homeostasis GO:0019725 138 0.025
chemical homeostasis GO:0048878 137 0.024
glycosyl compound biosynthetic process GO:1901659 42 0.024
organic hydroxy compound metabolic process GO:1901615 125 0.024
nucleoside phosphate catabolic process GO:1901292 331 0.024
maturation of ssu rrna GO:0030490 105 0.024
ion homeostasis GO:0050801 118 0.024
protein complex biogenesis GO:0070271 314 0.024
ascospore formation GO:0030437 107 0.024
nucleoside catabolic process GO:0009164 335 0.024
ribosomal large subunit biogenesis GO:0042273 98 0.023
cellular amino acid metabolic process GO:0006520 225 0.023
purine nucleoside catabolic process GO:0006152 330 0.023
regulation of nuclear division GO:0051783 103 0.023
regulation of cellular component organization GO:0051128 334 0.023
regulation of hydrolase activity GO:0051336 133 0.023
anion transport GO:0006820 145 0.023
macromolecule catabolic process GO:0009057 383 0.023
ribonucleoside triphosphate metabolic process GO:0009199 356 0.022
rrna methylation GO:0031167 13 0.022
ribonucleoside triphosphate catabolic process GO:0009203 327 0.022
peptidyl lysine modification GO:0018205 77 0.022
invasive growth in response to glucose limitation GO:0001403 61 0.022
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.022
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.022
protein localization to organelle GO:0033365 337 0.022
sexual sporulation resulting in formation of a cellular spore GO:0043935 113 0.021
regulation of phosphorus metabolic process GO:0051174 230 0.021
cellular nitrogen compound catabolic process GO:0044270 494 0.021
cellular ion homeostasis GO:0006873 112 0.021
cation homeostasis GO:0055080 105 0.021
response to organic cyclic compound GO:0014070 1 0.021
purine containing compound catabolic process GO:0072523 332 0.021
hexose catabolic process GO:0019320 24 0.021
cell cycle phase transition GO:0044770 144 0.021
purine nucleoside triphosphate catabolic process GO:0009146 329 0.020
ribonucleoprotein complex localization GO:0071166 46 0.020
monosaccharide catabolic process GO:0046365 28 0.020
regulation of protein metabolic process GO:0051246 237 0.020
establishment of cell polarity GO:0030010 64 0.020
organic anion transport GO:0015711 114 0.020
cellular response to organic substance GO:0071310 159 0.020
endonucleolytic cleavage in its1 to separate ssu rrna from 5 8s rrna and lsu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000447 43 0.020
purine nucleoside triphosphate metabolic process GO:0009144 356 0.020
establishment of protein localization GO:0045184 367 0.020
regulation of catalytic activity GO:0050790 307 0.020
cellular amino acid biosynthetic process GO:0008652 118 0.020
endonucleolytic cleavage involved in rrna processing GO:0000478 47 0.019
protein modification by small protein conjugation GO:0032446 144 0.019
response to extracellular stimulus GO:0009991 156 0.019
regulation of cell division GO:0051302 113 0.019
carbohydrate derivative metabolic process GO:1901135 549 0.019
purine ribonucleotide metabolic process GO:0009150 372 0.019
nucleotide catabolic process GO:0009166 330 0.019
rna splicing via transesterification reactions GO:0000375 118 0.019
protein modification by small protein conjugation or removal GO:0070647 172 0.019
single organism carbohydrate catabolic process GO:0044724 73 0.019
cofactor biosynthetic process GO:0051188 80 0.019
rna catabolic process GO:0006401 118 0.018
filamentous growth of a population of unicellular organisms GO:0044182 109 0.018
ribonucleoprotein complex assembly GO:0022618 143 0.018
cleavage involved in rrna processing GO:0000469 69 0.018
fungal type cell wall organization or biogenesis GO:0071852 169 0.018
intracellular protein transport GO:0006886 319 0.018
dna recombination GO:0006310 172 0.018
nucleoside triphosphate metabolic process GO:0009141 364 0.018
negative regulation of protein metabolic process GO:0051248 85 0.018
cellular amine metabolic process GO:0044106 51 0.018
oxidation reduction process GO:0055114 353 0.018
cellular protein complex assembly GO:0043623 209 0.018
ribonucleoprotein complex export from nucleus GO:0071426 46 0.017
lipid localization GO:0010876 60 0.017
organophosphate catabolic process GO:0046434 338 0.017
negative regulation of chromatin silencing GO:0031936 25 0.017
positive regulation of hydrolase activity GO:0051345 112 0.017
ribosomal subunit export from nucleus GO:0000054 46 0.017
cellular response to nutrient levels GO:0031669 144 0.017
cellular protein catabolic process GO:0044257 213 0.017
protein processing GO:0016485 64 0.017
anatomical structure morphogenesis GO:0009653 160 0.017
lipid biosynthetic process GO:0008610 170 0.017
meiotic cell cycle GO:0051321 272 0.017
purine nucleotide metabolic process GO:0006163 376 0.017
organic cyclic compound catabolic process GO:1901361 499 0.017
response to starvation GO:0042594 96 0.016
ion transport GO:0006811 274 0.016
anatomical structure formation involved in morphogenesis GO:0048646 136 0.016
cytoskeleton dependent cytokinesis GO:0061640 65 0.016
negative regulation of growth GO:0045926 13 0.016
covalent chromatin modification GO:0016569 119 0.016
purine nucleoside biosynthetic process GO:0042451 31 0.016
rrna containing ribonucleoprotein complex export from nucleus GO:0071428 46 0.016
trna methylation GO:0030488 21 0.016
endocytosis GO:0006897 90 0.016
chromatin silencing at telomere GO:0006348 84 0.015
response to organic substance GO:0010033 182 0.015
mrna catabolic process GO:0006402 93 0.015
regulation of response to stimulus GO:0048583 157 0.015
rna export from nucleus GO:0006405 88 0.015
reproductive process in single celled organism GO:0022413 145 0.015
glucose catabolic process GO:0006007 17 0.015
dna repair GO:0006281 236 0.015
reproduction of a single celled organism GO:0032505 191 0.015
rna splicing GO:0008380 131 0.015
positive regulation of gene expression epigenetic GO:0045815 25 0.015
maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000462 96 0.015
regulation of organelle organization GO:0033043 243 0.015
energy derivation by oxidation of organic compounds GO:0015980 125 0.014
aging GO:0007568 71 0.014
single organism developmental process GO:0044767 258 0.014
regulation of growth of unicellular organism as a thread of attached cells GO:0070784 31 0.014
nucleoside triphosphate catabolic process GO:0009143 329 0.014
cytokinesis site selection GO:0007105 40 0.014
cell aging GO:0007569 70 0.014
ribosome localization GO:0033750 46 0.014
nuclear division GO:0000280 263 0.014
proteolysis GO:0006508 268 0.014
maintenance of location GO:0051235 66 0.014
glucose metabolic process GO:0006006 65 0.014
establishment of protein localization to organelle GO:0072594 278 0.014
steroid metabolic process GO:0008202 47 0.014
developmental process GO:0032502 261 0.014
cell differentiation GO:0030154 161 0.014
rna 5 end processing GO:0000966 33 0.014
monocarboxylic acid metabolic process GO:0032787 122 0.014
positive regulation of catabolic process GO:0009896 135 0.014
response to oxygen containing compound GO:1901700 61 0.014
alpha amino acid metabolic process GO:1901605 124 0.014
cellular response to oxidative stress GO:0034599 94 0.014
single organism membrane organization GO:0044802 275 0.014
intronic snorna processing GO:0031070 9 0.014
protein alkylation GO:0008213 48 0.014
dna replication GO:0006260 147 0.014
cellular cation homeostasis GO:0030003 100 0.014
cellular carbohydrate metabolic process GO:0044262 135 0.014
meiotic cell cycle process GO:1903046 229 0.014
regulation of cellular ketone metabolic process GO:0010565 42 0.014
translation GO:0006412 230 0.014
coenzyme biosynthetic process GO:0009108 66 0.013
negative regulation of organelle organization GO:0010639 103 0.013
carboxylic acid transport GO:0046942 74 0.013
endonucleolytic cleavage of tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000479 47 0.013
chromatin organization GO:0006325 242 0.013
cellular ketone metabolic process GO:0042180 63 0.013
regulation of mitosis GO:0007088 65 0.013
developmental process involved in reproduction GO:0003006 159 0.013
posttranscriptional regulation of gene expression GO:0010608 115 0.013
growth of unicellular organism as a thread of attached cells GO:0070783 105 0.013
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 109 0.013
negative regulation of cellular protein metabolic process GO:0032269 85 0.013
organelle assembly GO:0070925 118 0.013
regulation of proteolysis GO:0030162 44 0.013
trna modification GO:0006400 75 0.012
nucleoside monophosphate catabolic process GO:0009125 224 0.012
protein maturation GO:0051604 76 0.012
multi organism process GO:0051704 233 0.012
regulation of translation GO:0006417 89 0.012
rna modification GO:0009451 99 0.012
cellular amino acid catabolic process GO:0009063 48 0.012
endomembrane system organization GO:0010256 74 0.012
nucleobase containing compound transport GO:0015931 124 0.012
regulation of growth GO:0040008 50 0.012
cellular response to oxygen containing compound GO:1901701 43 0.012
phosphorylation GO:0016310 291 0.012
organic acid transport GO:0015849 77 0.012
ribosome assembly GO:0042255 57 0.012
peptidyl amino acid modification GO:0018193 116 0.012
regulation of cell communication GO:0010646 124 0.011
ribonucleotide catabolic process GO:0009261 327 0.011
negative regulation of cellular component organization GO:0051129 109 0.011
positive regulation of organelle organization GO:0010638 85 0.011
positive regulation of phosphorus metabolic process GO:0010562 147 0.011
regulation of filamentous growth of a population of unicellular organisms GO:1900428 36 0.011
cellular response to chemical stimulus GO:0070887 315 0.011
mitochondrion organization GO:0007005 261 0.011
establishment of ribosome localization GO:0033753 46 0.011
purine ribonucleotide catabolic process GO:0009154 327 0.011
sexual sporulation GO:0034293 113 0.011
regulation of cell growth GO:0001558 29 0.011
rrna 5 end processing GO:0000967 32 0.011
histone modification GO:0016570 119 0.011
carbohydrate metabolic process GO:0005975 252 0.011
filamentous growth GO:0030447 124 0.011
establishment of rna localization GO:0051236 92 0.011
ncrna 5 end processing GO:0034471 32 0.011
metal ion transport GO:0030001 75 0.011
cellular response to dna damage stimulus GO:0006974 287 0.011
mitotic cytokinesis site selection GO:1902408 35 0.011
regulation of dna replication GO:0006275 51 0.011
rna localization GO:0006403 112 0.011
response to external stimulus GO:0009605 158 0.011
alpha amino acid catabolic process GO:1901606 28 0.011
ribonucleoside monophosphate catabolic process GO:0009158 224 0.011
regulation of transport GO:0051049 85 0.010
alcohol biosynthetic process GO:0046165 75 0.010
cellular developmental process GO:0048869 191 0.010
positive regulation of intracellular protein transport GO:0090316 3 0.010
cell growth GO:0016049 89 0.010
regulation of mitotic cell cycle phase transition GO:1901990 68 0.010
establishment or maintenance of cell polarity GO:0007163 96 0.010
regulation of localization GO:0032879 127 0.010

PPM2 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.011