Saccharomyces cerevisiae

90 known processes

TRL1 (YJL087C)

Trl1p

(Aliases: LIG1,RLG1)

TRL1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
ribosome biogenesis GO:0042254 335 0.246
rrna metabolic process GO:0016072 244 0.237
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.214
positive regulation of macromolecule metabolic process GO:0010604 394 0.210
positive regulation of rna biosynthetic process GO:1902680 286 0.209
ribonucleoprotein complex subunit organization GO:0071826 152 0.196
ncrna processing GO:0034470 330 0.195
ncrna 3 end processing GO:0043628 44 0.162
phosphorylation GO:0016310 291 0.155
positive regulation of transcription dna templated GO:0045893 286 0.138
establishment of protein localization GO:0045184 367 0.136
snorna metabolic process GO:0016074 40 0.132
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.128
energy derivation by oxidation of organic compounds GO:0015980 125 0.124
positive regulation of cellular biosynthetic process GO:0031328 336 0.123
positive regulation of biosynthetic process GO:0009891 336 0.118
mrna metabolic process GO:0016071 269 0.117
heterocycle catabolic process GO:0046700 494 0.116
positive regulation of nucleic acid templated transcription GO:1903508 286 0.110
dna templated transcription termination GO:0006353 42 0.106
positive regulation of rna metabolic process GO:0051254 294 0.103
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.103
ribosomal large subunit biogenesis GO:0042273 98 0.101
response to chemical GO:0042221 390 0.098
carboxylic acid metabolic process GO:0019752 338 0.096
nucleobase containing compound catabolic process GO:0034655 479 0.094
aromatic compound catabolic process GO:0019439 491 0.094
protein complex biogenesis GO:0070271 314 0.093
organophosphate metabolic process GO:0019637 597 0.085
regulation of phosphorus metabolic process GO:0051174 230 0.085
cell communication GO:0007154 345 0.084
oxoacid metabolic process GO:0043436 351 0.084
rrna processing GO:0006364 227 0.082
carbohydrate derivative metabolic process GO:1901135 549 0.077
nucleobase containing small molecule metabolic process GO:0055086 491 0.076
regulation of molecular function GO:0065009 320 0.071
cellular amino acid metabolic process GO:0006520 225 0.070
positive regulation of gene expression GO:0010628 321 0.070
protein modification by small protein conjugation GO:0032446 144 0.065
establishment of protein localization to membrane GO:0090150 99 0.065
reproductive process GO:0022414 248 0.064
negative regulation of cell cycle phase transition GO:1901988 59 0.060
conjugation with cellular fusion GO:0000747 106 0.060
single organism membrane organization GO:0044802 275 0.059
regulation of biological quality GO:0065008 391 0.059
negative regulation of transcription dna templated GO:0045892 258 0.059
rna phosphodiester bond hydrolysis endonucleolytic GO:0090502 79 0.058
gtp catabolic process GO:0006184 107 0.057
cell wall organization GO:0071555 146 0.055
organophosphate catabolic process GO:0046434 338 0.054
rna 3 end processing GO:0031123 88 0.053
ribonucleoprotein complex assembly GO:0022618 143 0.053
rna catabolic process GO:0006401 118 0.051
membrane organization GO:0061024 276 0.051
single organism catabolic process GO:0044712 619 0.050
methylation GO:0032259 101 0.050
mitotic cell cycle checkpoint GO:0007093 56 0.050
ribonucleotide metabolic process GO:0009259 377 0.049
sulfur compound metabolic process GO:0006790 95 0.049
positive regulation of phosphorus metabolic process GO:0010562 147 0.049
response to pheromone GO:0019236 92 0.049
protein folding GO:0006457 94 0.048
regulation of phosphate metabolic process GO:0019220 230 0.048
histone lysine methylation GO:0034968 26 0.047
maturation of lsu rrna GO:0000470 39 0.046
reproduction of a single celled organism GO:0032505 191 0.045
purine nucleoside metabolic process GO:0042278 380 0.044
cellular nitrogen compound catabolic process GO:0044270 494 0.044
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.044
ribosome localization GO:0033750 46 0.043
positive regulation of protein metabolic process GO:0051247 93 0.043
oxidation reduction process GO:0055114 353 0.043
snorna processing GO:0043144 34 0.042
cofactor metabolic process GO:0051186 126 0.042
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.041
single organism carbohydrate metabolic process GO:0044723 237 0.041
regulation of cellular protein metabolic process GO:0032268 232 0.040
ribosome assembly GO:0042255 57 0.040
cellular carbohydrate metabolic process GO:0044262 135 0.040
rrna transcription GO:0009303 31 0.040
intracellular signal transduction GO:0035556 112 0.040
protein phosphorylation GO:0006468 197 0.039
cellular response to pheromone GO:0071444 88 0.039
regulation of catalytic activity GO:0050790 307 0.039
organic cyclic compound catabolic process GO:1901361 499 0.039
macromolecule catabolic process GO:0009057 383 0.039
carboxylic acid biosynthetic process GO:0046394 152 0.039
dna recombination GO:0006310 172 0.038
nucleoside metabolic process GO:0009116 394 0.037
organic hydroxy compound metabolic process GO:1901615 125 0.037
snrna metabolic process GO:0016073 25 0.037
dna repair GO:0006281 236 0.037
multi organism reproductive process GO:0044703 216 0.037
multi organism process GO:0051704 233 0.036
trna metabolic process GO:0006399 151 0.036
rna splicing GO:0008380 131 0.036
single organism signaling GO:0044700 208 0.035
organonitrogen compound catabolic process GO:1901565 404 0.035
guanosine containing compound metabolic process GO:1901068 111 0.035
ribonucleoside triphosphate catabolic process GO:0009203 327 0.035
nuclear transcribed mrna catabolic process deadenylation dependent decay GO:0000288 44 0.035
conjugation GO:0000746 107 0.034
cell wall organization or biogenesis GO:0071554 190 0.034
signaling GO:0023052 208 0.034
ribosomal large subunit assembly GO:0000027 35 0.034
gtp metabolic process GO:0046039 107 0.034
protein transport GO:0015031 345 0.033
carbohydrate metabolic process GO:0005975 252 0.033
single organism cellular localization GO:1902580 375 0.033
regulation of cell cycle process GO:0010564 150 0.033
regulation of cellular component organization GO:0051128 334 0.032
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.032
response to organic substance GO:0010033 182 0.032
transcription from rna polymerase i promoter GO:0006360 63 0.032
purine ribonucleoside metabolic process GO:0046128 380 0.032
positive regulation of catalytic activity GO:0043085 178 0.032
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.031
trna processing GO:0008033 101 0.031
intracellular protein transport GO:0006886 319 0.031
histone h3 k4 methylation GO:0051568 18 0.030
ras protein signal transduction GO:0007265 29 0.030
glycerolipid metabolic process GO:0046486 108 0.030
ribonucleoside triphosphate metabolic process GO:0009199 356 0.030
rna phosphodiester bond hydrolysis GO:0090501 112 0.030
mitochondrion organization GO:0007005 261 0.030
generation of precursor metabolites and energy GO:0006091 147 0.029
nuclear transcribed mrna catabolic process GO:0000956 89 0.029
regulation of organelle organization GO:0033043 243 0.029
positive regulation of phosphate metabolic process GO:0045937 147 0.029
carbohydrate catabolic process GO:0016052 77 0.029
regulation of cellular ketone metabolic process GO:0010565 42 0.029
vesicle mediated transport GO:0016192 335 0.029
cellular response to chemical stimulus GO:0070887 315 0.029
small molecule biosynthetic process GO:0044283 258 0.028
multi organism cellular process GO:0044764 120 0.028
cellular respiration GO:0045333 82 0.028
response to heat GO:0009408 69 0.028
macromolecular complex disassembly GO:0032984 80 0.028
regulation of transcription from rna polymerase i promoter GO:0006356 36 0.028
protein complex assembly GO:0006461 302 0.028
positive regulation of intracellular protein transport GO:0090316 3 0.027
fungal type cell wall organization GO:0031505 145 0.027
cell cycle phase transition GO:0044770 144 0.027
peptidyl lysine methylation GO:0018022 24 0.027
cellular response to organic substance GO:0071310 159 0.027
mrna processing GO:0006397 185 0.027
chromatin silencing GO:0006342 147 0.027
positive regulation of ras protein signal transduction GO:0046579 3 0.026
negative regulation of gene expression GO:0010629 312 0.026
regulation of gene silencing GO:0060968 41 0.026
response to pheromone involved in conjugation with cellular fusion GO:0000749 74 0.026
positive regulation of molecular function GO:0044093 185 0.026
negative regulation of gene expression epigenetic GO:0045814 147 0.025
glycosyl compound metabolic process GO:1901657 398 0.025
cellular macromolecule catabolic process GO:0044265 363 0.025
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.025
regulation of hydrolase activity GO:0051336 133 0.025
golgi vesicle transport GO:0048193 188 0.025
purine ribonucleoside catabolic process GO:0046130 330 0.025
purine nucleotide catabolic process GO:0006195 328 0.025
negative regulation of cell cycle GO:0045786 91 0.025
protein localization to membrane GO:0072657 102 0.024
ion homeostasis GO:0050801 118 0.024
ribonucleoside metabolic process GO:0009119 389 0.024
organelle localization GO:0051640 128 0.024
maturation of 5 8s rrna GO:0000460 80 0.024
histone methylation GO:0016571 28 0.024
nucleoside phosphate metabolic process GO:0006753 458 0.024
cellular protein complex assembly GO:0043623 209 0.024
karyogamy GO:0000741 17 0.024
positive regulation of nucleocytoplasmic transport GO:0046824 4 0.024
coenzyme metabolic process GO:0006732 104 0.024
cellular component disassembly GO:0022411 86 0.024
negative regulation of mitotic cell cycle GO:0045930 63 0.023
phosphatidylinositol metabolic process GO:0046488 62 0.023
purine containing compound metabolic process GO:0072521 400 0.023
small gtpase mediated signal transduction GO:0007264 36 0.023
alpha amino acid catabolic process GO:1901606 28 0.023
regulation of protein metabolic process GO:0051246 237 0.023
termination of rna polymerase ii transcription GO:0006369 26 0.023
chromatin silencing at telomere GO:0006348 84 0.023
cellular amine metabolic process GO:0044106 51 0.023
fungal type cell wall organization or biogenesis GO:0071852 169 0.022
post golgi vesicle mediated transport GO:0006892 72 0.022
carbohydrate derivative catabolic process GO:1901136 339 0.022
regulation of cellular component biogenesis GO:0044087 112 0.022
establishment of ribosome localization GO:0033753 46 0.022
regulation of catabolic process GO:0009894 199 0.022
monosaccharide catabolic process GO:0046365 28 0.022
small molecule catabolic process GO:0044282 88 0.022
rrna containing ribonucleoprotein complex export from nucleus GO:0071428 46 0.022
protein modification by small protein conjugation or removal GO:0070647 172 0.022
golgi to plasma membrane transport GO:0006893 33 0.022
nucleotide catabolic process GO:0009166 330 0.022
regulation of mitotic cell cycle phase transition GO:1901990 68 0.021
nuclear export GO:0051168 124 0.021
maturation of lsu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000463 33 0.021
protein localization to organelle GO:0033365 337 0.021
single organism carbohydrate catabolic process GO:0044724 73 0.021
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.021
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.021
regulation of dna templated transcription elongation GO:0032784 44 0.021
negative regulation of rna metabolic process GO:0051253 262 0.021
negative regulation of cellular component organization GO:0051129 109 0.020
regulation of cellular amino acid metabolic process GO:0006521 16 0.020
organic acid biosynthetic process GO:0016053 152 0.020
regulation of chromatin silencing at telomere GO:0031938 27 0.020
phosphorylation of rna polymerase ii c terminal domain GO:0070816 20 0.020
cellular cation homeostasis GO:0030003 100 0.020
external encapsulating structure organization GO:0045229 146 0.020
negative regulation of cell cycle process GO:0010948 86 0.020
purine nucleoside triphosphate metabolic process GO:0009144 356 0.020
regulation of chromatin silencing GO:0031935 39 0.020
purine ribonucleotide metabolic process GO:0009150 372 0.020
signal transduction GO:0007165 208 0.019
regulation of response to stimulus GO:0048583 157 0.019
cellular chemical homeostasis GO:0055082 123 0.019
nucleotide metabolic process GO:0009117 453 0.019
regulation of phosphorylation GO:0042325 86 0.019
mrna catabolic process GO:0006402 93 0.019
nucleoside phosphate catabolic process GO:1901292 331 0.019
negative regulation of cellular biosynthetic process GO:0031327 312 0.019
protein complex localization GO:0031503 32 0.019
regulation of carbohydrate metabolic process GO:0006109 43 0.018
dna templated transcription initiation GO:0006352 71 0.018
lipid transport GO:0006869 58 0.018
sulfate assimilation GO:0000103 9 0.018
phospholipid biosynthetic process GO:0008654 89 0.018
regulation of cell cycle GO:0051726 195 0.018
anatomical structure formation involved in morphogenesis GO:0048646 136 0.018
negative regulation of rna biosynthetic process GO:1902679 260 0.018
reproductive process in single celled organism GO:0022413 145 0.018
response to organic cyclic compound GO:0014070 1 0.018
cellular response to dna damage stimulus GO:0006974 287 0.018
regulation of nucleoside metabolic process GO:0009118 106 0.018
regulation of gtp catabolic process GO:0033124 84 0.018
cellular ketone metabolic process GO:0042180 63 0.018
nucleus organization GO:0006997 62 0.018
positive regulation of organelle organization GO:0010638 85 0.018
aging GO:0007568 71 0.018
macromolecule methylation GO:0043414 85 0.018
positive regulation of intracellular transport GO:0032388 4 0.018
protein maturation GO:0051604 76 0.018
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 38 0.017
negative regulation of cellular metabolic process GO:0031324 407 0.017
ribose phosphate metabolic process GO:0019693 384 0.017
ribonucleoside catabolic process GO:0042454 332 0.017
positive regulation of cytoplasmic transport GO:1903651 4 0.017
single organism developmental process GO:0044767 258 0.017
response to osmotic stress GO:0006970 83 0.017
cellular response to heat GO:0034605 53 0.017
negative regulation of biosynthetic process GO:0009890 312 0.017
protein complex disassembly GO:0043241 70 0.017
ribonucleotide catabolic process GO:0009261 327 0.017
coenzyme biosynthetic process GO:0009108 66 0.017
positive regulation of hydrolase activity GO:0051345 112 0.017
hexose catabolic process GO:0019320 24 0.017
positive regulation of cellular catabolic process GO:0031331 128 0.017
peptidyl amino acid modification GO:0018193 116 0.016
cellular transition metal ion homeostasis GO:0046916 59 0.016
sexual reproduction GO:0019953 216 0.016
dephosphorylation GO:0016311 127 0.016
regulation of cellular catabolic process GO:0031329 195 0.016
anion transport GO:0006820 145 0.016
protein alkylation GO:0008213 48 0.016
regulation of small gtpase mediated signal transduction GO:0051056 47 0.016
regulation of fungal type cell wall organization GO:0060237 14 0.016
regulation of cellular localization GO:0060341 50 0.016
purine containing compound catabolic process GO:0072523 332 0.016
regulation of protein localization GO:0032880 62 0.016
glucose metabolic process GO:0006006 65 0.016
positive regulation of cellular component organization GO:0051130 116 0.016
cofactor biosynthetic process GO:0051188 80 0.016
response to temperature stimulus GO:0009266 74 0.016
rho protein signal transduction GO:0007266 12 0.016
purine nucleoside catabolic process GO:0006152 330 0.015
organic acid metabolic process GO:0006082 352 0.015
spliceosomal complex assembly GO:0000245 21 0.015
purine ribonucleotide catabolic process GO:0009154 327 0.015
cation homeostasis GO:0055080 105 0.015
positive regulation of purine nucleotide catabolic process GO:0033123 97 0.015
positive regulation of secretion by cell GO:1903532 2 0.015
regulation of signaling GO:0023051 119 0.015
cellular metal ion homeostasis GO:0006875 78 0.015
ribosomal subunit export from nucleus GO:0000054 46 0.015
posttranscriptional regulation of gene expression GO:0010608 115 0.015
regulation of signal transduction GO:0009966 114 0.015
aspartate family amino acid metabolic process GO:0009066 40 0.015
guanosine containing compound catabolic process GO:1901069 109 0.015
positive regulation of cell cycle process GO:0090068 31 0.015
amine metabolic process GO:0009308 51 0.015
single organism reproductive process GO:0044702 159 0.015
monocarboxylic acid metabolic process GO:0032787 122 0.015
carbohydrate derivative biosynthetic process GO:1901137 181 0.014
response to oxidative stress GO:0006979 99 0.014
establishment of rna localization GO:0051236 92 0.014
cellular developmental process GO:0048869 191 0.014
mitotic cell cycle phase transition GO:0044772 141 0.014
developmental process involved in reproduction GO:0003006 159 0.014
u4 snrna 3 end processing GO:0034475 11 0.014
positive regulation of response to stimulus GO:0048584 37 0.014
negative regulation of nuclear division GO:0051784 62 0.014
hexose metabolic process GO:0019318 78 0.014
purine nucleotide metabolic process GO:0006163 376 0.014
homeostatic process GO:0042592 227 0.014
positive regulation of secretion GO:0051047 2 0.014
ribonucleoprotein complex localization GO:0071166 46 0.014
protein targeting to membrane GO:0006612 52 0.014
regulation of purine nucleotide catabolic process GO:0033121 106 0.014
negative regulation of chromatin silencing at telomere GO:0031939 15 0.014
positive regulation of gtp catabolic process GO:0033126 80 0.014
cellular response to abiotic stimulus GO:0071214 62 0.014
mitotic cell cycle GO:0000278 306 0.013
nucleoside triphosphate catabolic process GO:0009143 329 0.013
pyridine containing compound metabolic process GO:0072524 53 0.013
cellular ion homeostasis GO:0006873 112 0.013
plasma membrane organization GO:0007009 21 0.013
transition metal ion homeostasis GO:0055076 59 0.013
regulation of meiotic cell cycle GO:0051445 43 0.013
regulation of nucleotide metabolic process GO:0006140 110 0.013
translation GO:0006412 230 0.013
purine nucleoside triphosphate catabolic process GO:0009146 329 0.013
alpha amino acid metabolic process GO:1901605 124 0.013
positive regulation of catabolic process GO:0009896 135 0.013
positive regulation of dna templated transcription elongation GO:0032786 42 0.013
phospholipid metabolic process GO:0006644 125 0.013
regulation of protein modification process GO:0031399 110 0.013
maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000466 80 0.013
regulation of cell cycle phase transition GO:1901987 70 0.013
developmental process GO:0032502 261 0.013
metal ion homeostasis GO:0055065 79 0.013
regulation of purine nucleotide metabolic process GO:1900542 109 0.013
mitotic nuclear division GO:0007067 131 0.013
sulfur compound biosynthetic process GO:0044272 53 0.013
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.013
cellular protein catabolic process GO:0044257 213 0.013
regulation of chromosome organization GO:0033044 66 0.012
organonitrogen compound biosynthetic process GO:1901566 314 0.012
response to uv GO:0009411 4 0.012
regulation of nucleotide catabolic process GO:0030811 106 0.012
dna catabolic process GO:0006308 42 0.012
positive regulation of protein modification process GO:0031401 49 0.012
regulation of cellular amine metabolic process GO:0033238 21 0.012
cellular modified amino acid metabolic process GO:0006575 51 0.012
regulation of intracellular signal transduction GO:1902531 78 0.012
alcohol metabolic process GO:0006066 112 0.012
trna export from nucleus GO:0006409 16 0.012
snrna processing GO:0016180 17 0.012
regulation of gtpase activity GO:0043087 84 0.012
snrna 3 end processing GO:0034472 16 0.012
transcription from rna polymerase iii promoter GO:0006383 40 0.012
sex determination GO:0007530 32 0.012
mitotic cell cycle process GO:1903047 294 0.011
glycosyl compound catabolic process GO:1901658 335 0.011
cellular homeostasis GO:0019725 138 0.011
lipid metabolic process GO:0006629 269 0.011
membrane docking GO:0022406 22 0.011
positive regulation of nucleotide metabolic process GO:0045981 101 0.011
exonucleolytic nuclear transcribed mrna catabolic process involved in deadenylation dependent decay GO:0043928 8 0.011
positive regulation of purine nucleotide metabolic process GO:1900544 100 0.011
regulation of translation GO:0006417 89 0.011
sexual sporulation resulting in formation of a cellular spore GO:0043935 113 0.011
chemical homeostasis GO:0048878 137 0.011
positive regulation of cellular protein metabolic process GO:0032270 89 0.011
response to abiotic stimulus GO:0009628 159 0.011
negative regulation of mitotic cell cycle phase transition GO:1901991 57 0.011
dna templated transcription elongation GO:0006354 91 0.011
positive regulation of nucleotide catabolic process GO:0030813 97 0.011
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.011
dna replication initiation GO:0006270 48 0.011
pyrimidine containing compound biosynthetic process GO:0072528 33 0.011
regulation of protein complex assembly GO:0043254 77 0.011
regulation of ras protein signal transduction GO:0046578 47 0.010
trna modification GO:0006400 75 0.010
regulation of localization GO:0032879 127 0.010
nucleoside monophosphate metabolic process GO:0009123 267 0.010
ubiquitin dependent protein catabolic process GO:0006511 181 0.010
regulation of dna templated transcription initiation GO:2000142 19 0.010
response to calcium ion GO:0051592 1 0.010
protein targeting GO:0006605 272 0.010
regulation of rna splicing GO:0043484 3 0.010
protein kinase c signaling GO:0070528 3 0.010
meiotic cell cycle GO:0051321 272 0.010

TRL1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org