Saccharomyces cerevisiae

35 known processes

VPS28 (YPL065W)

Vps28p

(Aliases: VPT28,VPL13)

VPS28 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
protein targeting to vacuole GO:0006623 91 0.999
protein localization to vacuole GO:0072665 92 0.999
establishment of protein localization to vacuole GO:0072666 91 0.991
vacuolar transport GO:0007034 145 0.991
intracellular protein transport GO:0006886 319 0.990
single organism cellular localization GO:1902580 375 0.988
protein targeting GO:0006605 272 0.987
establishment of protein localization GO:0045184 367 0.987
protein transport GO:0015031 345 0.987
establishment of protein localization to organelle GO:0072594 278 0.981
protein localization to organelle GO:0033365 337 0.963
vesicle mediated transport GO:0016192 335 0.680
golgi vesicle transport GO:0048193 188 0.517
macroautophagy GO:0016236 55 0.487
Fly
endosomal transport GO:0016197 86 0.470
Fly
cellular response to nutrient levels GO:0031669 144 0.357
Fly
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.345
response to nutrient levels GO:0031667 150 0.312
Fly
protein localization to membrane GO:0072657 102 0.298
maintenance of cell polarity GO:0030011 10 0.273
negative regulation of cellular metabolic process GO:0031324 407 0.270
negative regulation of macromolecule metabolic process GO:0010605 375 0.245
single organism membrane organization GO:0044802 275 0.240
cellular response to starvation GO:0009267 90 0.219
Fly
membrane organization GO:0061024 276 0.199
anatomical structure development GO:0048856 160 0.195
Fly
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.194
macromolecule catabolic process GO:0009057 383 0.180
Fly
protein targeting to membrane GO:0006612 52 0.172
autophagy GO:0006914 106 0.168
Fly
establishment or maintenance of cell polarity GO:0007163 96 0.167
rna catabolic process GO:0006401 118 0.165
carbon catabolite regulation of transcription from rna polymerase ii promoter GO:0000429 34 0.165
negative regulation of rna biosynthetic process GO:1902679 260 0.162
late endosome to vacuole transport GO:0045324 42 0.161
carbon catabolite regulation of transcription GO:0045990 39 0.151
organic cyclic compound catabolic process GO:1901361 499 0.142
cellular response to external stimulus GO:0071496 150 0.137
Fly
maintenance of protein location in cell GO:0032507 50 0.134
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.129
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.128
negative regulation of biosynthetic process GO:0009890 312 0.124
response to chemical GO:0042221 390 0.119
negative regulation of cellular biosynthetic process GO:0031327 312 0.119
modification dependent macromolecule catabolic process GO:0043632 203 0.109
Fly
maintenance of location in cell GO:0051651 58 0.107
cellular response to nutrient GO:0031670 50 0.107
establishment of protein localization to membrane GO:0090150 99 0.106
response to extracellular stimulus GO:0009991 156 0.104
Fly
cellular response to extracellular stimulus GO:0031668 150 0.103
Fly
negative regulation of rna metabolic process GO:0051253 262 0.102
single organism developmental process GO:0044767 258 0.102
Fly
negative regulation of transcription dna templated GO:0045892 258 0.097
response to nutrient GO:0007584 52 0.092
post golgi vesicle mediated transport GO:0006892 72 0.091
cellular nitrogen compound catabolic process GO:0044270 494 0.090
protein complex biogenesis GO:0070271 314 0.087
negative regulation of gene expression GO:0010629 312 0.087
single organism catabolic process GO:0044712 619 0.081
Fly
regulation of cellular component organization GO:0051128 334 0.076
developmental process GO:0032502 261 0.075
Fly
cellular developmental process GO:0048869 191 0.075
Fly
cell differentiation GO:0030154 161 0.073
Fly
cellular macromolecule catabolic process GO:0044265 363 0.069
Fly
endosome transport via multivesicular body sorting pathway GO:0032509 27 0.069
Fly
carbon catabolite repression of transcription GO:0045013 12 0.068
cell communication GO:0007154 345 0.065
Fly
nucleobase containing compound catabolic process GO:0034655 479 0.065
negative regulation of transcription from rna polymerase ii promoter by glucose GO:0000433 10 0.063
organelle assembly GO:0070925 118 0.063
negative regulation of nucleic acid templated transcription GO:1903507 260 0.059
aromatic compound catabolic process GO:0019439 491 0.056
heterocycle catabolic process GO:0046700 494 0.055
response to external stimulus GO:0009605 158 0.053
Fly
single organism membrane budding GO:1902591 21 0.053
maintenance of protein location GO:0045185 53 0.053
mrna catabolic process GO:0006402 93 0.053
organonitrogen compound catabolic process GO:1901565 404 0.052
regulation of response to stimulus GO:0048583 157 0.051
Fly
regulation of signaling GO:0023051 119 0.049
Fly
endomembrane system organization GO:0010256 74 0.048
nuclear transcribed mrna catabolic process GO:0000956 89 0.048
regulation of cellular protein metabolic process GO:0032268 232 0.046
protein localization to golgi apparatus GO:0034067 13 0.046
regulation of biological quality GO:0065008 391 0.044
Fly
cofactor biosynthetic process GO:0051188 80 0.042
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.042
organelle fusion GO:0048284 85 0.042
Fly
negative regulation of cellular component organization GO:0051129 109 0.041
cofactor metabolic process GO:0051186 126 0.040
anatomical structure morphogenesis GO:0009653 160 0.039
Fly
multi organism process GO:0051704 233 0.038
Fly
positive regulation of biosynthetic process GO:0009891 336 0.037
regulation of transcription by glucose GO:0046015 13 0.037
vesicle organization GO:0016050 68 0.037
dna replication GO:0006260 147 0.037
cellular amino acid metabolic process GO:0006520 225 0.036
secretion by cell GO:0032940 50 0.036
negative regulation of protein metabolic process GO:0051248 85 0.035
protein complex assembly GO:0006461 302 0.035
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.033
response to starvation GO:0042594 96 0.032
Fly
carbon catabolite repression of transcription from rna polymerase ii promoter GO:0000437 12 0.031
phospholipid metabolic process GO:0006644 125 0.030
cellular protein catabolic process GO:0044257 213 0.030
Fly
meiotic cell cycle GO:0051321 272 0.030
small molecule biosynthetic process GO:0044283 258 0.030
sexual sporulation GO:0034293 113 0.029
membrane fusion GO:0061025 73 0.029
Fly
cellular response to chemical stimulus GO:0070887 315 0.028
oxoacid metabolic process GO:0043436 351 0.027
vacuole organization GO:0007033 75 0.027
negative regulation of cellular protein metabolic process GO:0032269 85 0.027
retrograde transport endosome to golgi GO:0042147 33 0.027
signal transduction GO:0007165 208 0.027
Fly
developmental process involved in reproduction GO:0003006 159 0.027
Fly
organic acid biosynthetic process GO:0016053 152 0.027
growth GO:0040007 157 0.027
Fly
nucleotide metabolic process GO:0009117 453 0.026
ribonucleotide catabolic process GO:0009261 327 0.026
endocytosis GO:0006897 90 0.026
regulation of protein complex assembly GO:0043254 77 0.026
maintenance of location GO:0051235 66 0.025
reproductive process in single celled organism GO:0022413 145 0.024
signaling GO:0023052 208 0.023
Fly
organophosphate metabolic process GO:0019637 597 0.023
carboxylic acid metabolic process GO:0019752 338 0.023
localization within membrane GO:0051668 29 0.023
single organism signaling GO:0044700 208 0.022
Fly
sporulation GO:0043934 132 0.022
positive regulation of exocytosis GO:0045921 2 0.022
positive regulation of secretion by cell GO:1903532 2 0.022
cellular lipid metabolic process GO:0044255 229 0.022
glycosyl compound catabolic process GO:1901658 335 0.022
purine containing compound catabolic process GO:0072523 332 0.021
coenzyme biosynthetic process GO:0009108 66 0.021
organophosphate biosynthetic process GO:0090407 182 0.021
positive regulation of macromolecule metabolic process GO:0010604 394 0.020
purine ribonucleotide metabolic process GO:0009150 372 0.020
mitochondrion organization GO:0007005 261 0.019
plasma membrane organization GO:0007009 21 0.019
ascospore formation GO:0030437 107 0.018
glycosyl compound metabolic process GO:1901657 398 0.018
negative regulation of transcription by glucose GO:0045014 10 0.018
regulation of cellular localization GO:0060341 50 0.018
cation homeostasis GO:0055080 105 0.018
sexual reproduction GO:0019953 216 0.018
Fly
lipid metabolic process GO:0006629 269 0.017
nucleoside catabolic process GO:0009164 335 0.017
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.017
regulation of transcription from rna polymerase ii promoter by glucose GO:0000430 12 0.017
regulation of localization GO:0032879 127 0.016
nucleotide catabolic process GO:0009166 330 0.016
cell surface receptor signaling pathway GO:0007166 38 0.016
Fly
regulation of growth GO:0040008 50 0.016
Fly
membrane budding GO:0006900 22 0.016
protein acylation GO:0043543 66 0.015
meiotic cell cycle process GO:1903046 229 0.015
single organism membrane fusion GO:0044801 71 0.015
Fly
single organism reproductive process GO:0044702 159 0.015
Fly
telomere organization GO:0032200 75 0.015
monovalent inorganic cation homeostasis GO:0055067 32 0.014
nuclear transcribed mrna catabolic process deadenylation dependent decay GO:0000288 44 0.014
nucleobase containing small molecule metabolic process GO:0055086 491 0.014
regulation of cellular component biogenesis GO:0044087 112 0.014
sporulation resulting in formation of a cellular spore GO:0030435 129 0.014
carbohydrate derivative catabolic process GO:1901136 339 0.014
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.014
phosphatidylinositol metabolic process GO:0046488 62 0.013
growth of unicellular organism as a thread of attached cells GO:0070783 105 0.013
organonitrogen compound biosynthetic process GO:1901566 314 0.013
protein acetylation GO:0006473 59 0.013
positive regulation of rna metabolic process GO:0051254 294 0.013
purine containing compound metabolic process GO:0072521 400 0.013
regulation of multi organism process GO:0043900 20 0.013
Fly
multi organism reproductive process GO:0044703 216 0.013
Fly
sexual sporulation resulting in formation of a cellular spore GO:0043935 113 0.013
mitochondrial genome maintenance GO:0000002 40 0.012
ribonucleotide metabolic process GO:0009259 377 0.012
mitochondrion distribution GO:0048311 21 0.012
regulation of ph GO:0006885 21 0.012
negative regulation of gene expression epigenetic GO:0045814 147 0.012
chromatin silencing GO:0006342 147 0.012
purine nucleoside triphosphate metabolic process GO:0009144 356 0.012
mitochondrion inheritance GO:0000001 21 0.012
purine nucleoside triphosphate catabolic process GO:0009146 329 0.012
positive regulation of transcription dna templated GO:0045893 286 0.012
regulation of protein metabolic process GO:0051246 237 0.012
cvt pathway GO:0032258 37 0.012
negative regulation of organelle organization GO:0010639 103 0.011
organic acid metabolic process GO:0006082 352 0.011
regulation of signal transduction GO:0009966 114 0.011
Fly
posttranscriptional regulation of gene expression GO:0010608 115 0.011
regulation of organelle organization GO:0033043 243 0.011
filamentous growth of a population of unicellular organisms GO:0044182 109 0.011
regulation of catabolic process GO:0009894 199 0.011
ubiquitin dependent protein catabolic process GO:0006511 181 0.011
Fly
cellular component morphogenesis GO:0032989 97 0.011
Fly
organelle inheritance GO:0048308 51 0.011
protein retention in golgi apparatus GO:0045053 11 0.011
energy derivation by oxidation of organic compounds GO:0015980 125 0.010
lipid modification GO:0030258 37 0.010
negative regulation of cell cycle GO:0045786 91 0.010
telomere maintenance GO:0000723 74 0.010
purine nucleoside catabolic process GO:0006152 330 0.010
purine ribonucleoside metabolic process GO:0046128 380 0.010
regulation of cell cycle GO:0051726 195 0.010
ribonucleoside catabolic process GO:0042454 332 0.010
dna templated transcription elongation GO:0006354 91 0.010
positive regulation of cellular biosynthetic process GO:0031328 336 0.010
reproductive process GO:0022414 248 0.010
Fly
alpha amino acid metabolic process GO:1901605 124 0.010

VPS28 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org