Saccharomyces cerevisiae

30 known processes

SHM1 (YBR263W)

Shm1p

(Aliases: TMP3,SHMT1)

SHM1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
transmembrane transport GO:0055085 349 0.282
cellular amino acid metabolic process GO:0006520 225 0.242
organic acid metabolic process GO:0006082 352 0.156
carboxylic acid metabolic process GO:0019752 338 0.131
carboxylic acid biosynthetic process GO:0046394 152 0.127
trna metabolic process GO:0006399 151 0.122
cytoplasmic translation GO:0002181 65 0.093
small molecule biosynthetic process GO:0044283 258 0.090
protein complex assembly GO:0006461 302 0.089
translation GO:0006412 230 0.086
ion homeostasis GO:0050801 118 0.067
cation homeostasis GO:0055080 105 0.064
oxoacid metabolic process GO:0043436 351 0.062
nitrogen compound transport GO:0071705 212 0.062
protein phosphorylation GO:0006468 197 0.062
cell communication GO:0007154 345 0.058
cellular ion homeostasis GO:0006873 112 0.058
small molecule catabolic process GO:0044282 88 0.057
mitochondrion organization GO:0007005 261 0.057
cellular chemical homeostasis GO:0055082 123 0.056
cellular amino acid biosynthetic process GO:0008652 118 0.055
ion transport GO:0006811 274 0.052
single organism cellular localization GO:1902580 375 0.052
alpha amino acid biosynthetic process GO:1901607 91 0.051
cellular lipid metabolic process GO:0044255 229 0.050
protein complex biogenesis GO:0070271 314 0.048
carboxylic acid catabolic process GO:0046395 71 0.044
dephosphorylation GO:0016311 127 0.044
cellular modified amino acid metabolic process GO:0006575 51 0.042
regulation of biological quality GO:0065008 391 0.041
response to chemical GO:0042221 390 0.041
single organism catabolic process GO:0044712 619 0.039
proteolysis GO:0006508 268 0.038
lipid metabolic process GO:0006629 269 0.038
amino acid activation GO:0043038 35 0.037
metal ion homeostasis GO:0055065 79 0.037
monocarboxylic acid metabolic process GO:0032787 122 0.036
glutamine family amino acid metabolic process GO:0009064 31 0.035
oxidation reduction process GO:0055114 353 0.035
cellular iron ion homeostasis GO:0006879 34 0.035
cellular response to dna damage stimulus GO:0006974 287 0.033
negative regulation of macromolecule metabolic process GO:0010605 375 0.032
single organism membrane organization GO:0044802 275 0.031
nucleobase containing compound transport GO:0015931 124 0.031
organic anion transport GO:0015711 114 0.030
inorganic cation transmembrane transport GO:0098662 98 0.030
cation transmembrane transport GO:0098655 135 0.030
trna aminoacylation GO:0043039 35 0.030
water soluble vitamin metabolic process GO:0006767 41 0.029
cellular cation homeostasis GO:0030003 100 0.029
aspartate family amino acid biosynthetic process GO:0009067 29 0.028
sulfur compound metabolic process GO:0006790 95 0.028
chemical homeostasis GO:0048878 137 0.027
cellular response to extracellular stimulus GO:0031668 150 0.025
regulation of phosphorus metabolic process GO:0051174 230 0.025
regulation of protein metabolic process GO:0051246 237 0.024
organic acid catabolic process GO:0016054 71 0.024
negative regulation of protein metabolic process GO:0051248 85 0.024
rrna processing GO:0006364 227 0.023
cellular transition metal ion homeostasis GO:0046916 59 0.023
regulation of protein modification process GO:0031399 110 0.022
cofactor metabolic process GO:0051186 126 0.022
trna aminoacylation for protein translation GO:0006418 32 0.022
cellular metal ion homeostasis GO:0006875 78 0.022
organic acid biosynthetic process GO:0016053 152 0.021
cellular response to external stimulus GO:0071496 150 0.021
negative regulation of cellular metabolic process GO:0031324 407 0.021
ion transmembrane transport GO:0034220 200 0.021
ncrna processing GO:0034470 330 0.021
establishment of protein localization to membrane GO:0090150 99 0.020
inorganic ion transmembrane transport GO:0098660 109 0.019
single organism developmental process GO:0044767 258 0.019
cellular homeostasis GO:0019725 138 0.019
transition metal ion homeostasis GO:0055076 59 0.019
homeostatic process GO:0042592 227 0.019
regulation of cellular protein metabolic process GO:0032268 232 0.019
alpha amino acid metabolic process GO:1901605 124 0.019
aspartate family amino acid metabolic process GO:0009066 40 0.019
protein localization to membrane GO:0072657 102 0.019
cytoskeleton organization GO:0007010 230 0.018
protein transport GO:0015031 345 0.017
cellular protein complex assembly GO:0043623 209 0.017
cellular component disassembly GO:0022411 86 0.016
coenzyme metabolic process GO:0006732 104 0.016
response to organic cyclic compound GO:0014070 1 0.016
positive regulation of gene expression GO:0010628 321 0.016
protein maturation GO:0051604 76 0.015
organonitrogen compound biosynthetic process GO:1901566 314 0.015
cellular macromolecule catabolic process GO:0044265 363 0.015
developmental process GO:0032502 261 0.014
anion transport GO:0006820 145 0.014
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.014
cofactor biosynthetic process GO:0051188 80 0.014
lipid localization GO:0010876 60 0.014
negative regulation of cellular protein metabolic process GO:0032269 85 0.013
regulation of signaling GO:0023051 119 0.013
organophosphate ester transport GO:0015748 45 0.013
water soluble vitamin biosynthetic process GO:0042364 38 0.013
regulation of molecular function GO:0065009 320 0.013
regulation of catalytic activity GO:0050790 307 0.013
nucleobase containing small molecule metabolic process GO:0055086 491 0.013
regulation of cell communication GO:0010646 124 0.012
nuclear division GO:0000280 263 0.012
intracellular signal transduction GO:0035556 112 0.012
rna transport GO:0050658 92 0.012
negative regulation of phosphate metabolic process GO:0045936 49 0.012
carbohydrate derivative metabolic process GO:1901135 549 0.012
single organism signaling GO:0044700 208 0.012
signal transduction GO:0007165 208 0.012
regulation of cellular component organization GO:0051128 334 0.012
regulation of phosphorylation GO:0042325 86 0.012
cellular response to nutrient levels GO:0031669 144 0.011
cellular response to oxidative stress GO:0034599 94 0.011
organic cyclic compound catabolic process GO:1901361 499 0.011
cellular protein catabolic process GO:0044257 213 0.011
rna methylation GO:0001510 39 0.011
regulation of cellular catabolic process GO:0031329 195 0.011
mitotic cell cycle GO:0000278 306 0.011
growth GO:0040007 157 0.010
membrane organization GO:0061024 276 0.010
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.010
coenzyme biosynthetic process GO:0009108 66 0.010

SHM1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.015