Saccharomyces cerevisiae

42 known processes

RAD4 (YER162C)

Rad4p

RAD4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
nucleotide excision repair GO:0006289 50 0.977
dna repair GO:0006281 236 0.970
cellular response to dna damage stimulus GO:0006974 287 0.965
macromolecule catabolic process GO:0009057 383 0.432
cellular macromolecule catabolic process GO:0044265 363 0.431
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.341
nucleobase containing compound catabolic process GO:0034655 479 0.336
cell communication GO:0007154 345 0.325
protein ubiquitination GO:0016567 118 0.317
aromatic compound catabolic process GO:0019439 491 0.300
signal transduction GO:0007165 208 0.282
single organism signaling GO:0044700 208 0.281
proteolysis GO:0006508 268 0.250
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.247
organelle fission GO:0048285 272 0.230
organic cyclic compound catabolic process GO:1901361 499 0.205
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.202
protein modification by small protein conjugation GO:0032446 144 0.189
modification dependent macromolecule catabolic process GO:0043632 203 0.175
negative regulation of gene expression GO:0010629 312 0.169
protein catabolic process GO:0030163 221 0.155
purine nucleotide metabolic process GO:0006163 376 0.154
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.152
purine nucleoside catabolic process GO:0006152 330 0.149
nucleobase containing small molecule metabolic process GO:0055086 491 0.148
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.145
purine nucleoside triphosphate metabolic process GO:0009144 356 0.137
purine containing compound catabolic process GO:0072523 332 0.133
positive regulation of nucleic acid templated transcription GO:1903508 286 0.133
purine nucleoside triphosphate catabolic process GO:0009146 329 0.133
signaling GO:0023052 208 0.132
cation transport GO:0006812 166 0.127
carbohydrate derivative catabolic process GO:1901136 339 0.127
ribonucleoside metabolic process GO:0009119 389 0.127
negative regulation of biosynthetic process GO:0009890 312 0.119
meiotic cell cycle GO:0051321 272 0.119
organophosphate catabolic process GO:0046434 338 0.118
nucleotide metabolic process GO:0009117 453 0.112
negative regulation of macromolecule metabolic process GO:0010605 375 0.109
nucleoside triphosphate metabolic process GO:0009141 364 0.107
nucleoside monophosphate metabolic process GO:0009123 267 0.106
ribosome biogenesis GO:0042254 335 0.103
purine ribonucleoside catabolic process GO:0046130 330 0.102
glycosyl compound catabolic process GO:1901658 335 0.102
negative regulation of rna metabolic process GO:0051253 262 0.097
ribonucleoside catabolic process GO:0042454 332 0.091
cellular nitrogen compound catabolic process GO:0044270 494 0.090
nucleoside phosphate catabolic process GO:1901292 331 0.089
ion transport GO:0006811 274 0.089
modification dependent protein catabolic process GO:0019941 181 0.088
organophosphate metabolic process GO:0019637 597 0.087
chromatin modification GO:0016568 200 0.087
heterocycle catabolic process GO:0046700 494 0.084
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.083
response to abiotic stimulus GO:0009628 159 0.082
positive regulation of biosynthetic process GO:0009891 336 0.080
ubiquitin dependent protein catabolic process GO:0006511 181 0.080
chromosome segregation GO:0007059 159 0.074
carbohydrate derivative metabolic process GO:1901135 549 0.074
purine nucleoside metabolic process GO:0042278 380 0.070
proteolysis involved in cellular protein catabolic process GO:0051603 198 0.070
single organism catabolic process GO:0044712 619 0.069
protein modification by small protein conjugation or removal GO:0070647 172 0.067
nucleotide catabolic process GO:0009166 330 0.064
nuclear transport GO:0051169 165 0.063
cellular protein catabolic process GO:0044257 213 0.063
ribonucleoside triphosphate metabolic process GO:0009199 356 0.062
nucleoside catabolic process GO:0009164 335 0.061
purine containing compound metabolic process GO:0072521 400 0.061
carboxylic acid metabolic process GO:0019752 338 0.061
cellular response to chemical stimulus GO:0070887 315 0.056
purine ribonucleotide catabolic process GO:0009154 327 0.056
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.056
negative regulation of transcription dna templated GO:0045892 258 0.055
positive regulation of transcription dna templated GO:0045893 286 0.055
chromatin organization GO:0006325 242 0.054
atp metabolic process GO:0046034 251 0.054
nucleoside triphosphate catabolic process GO:0009143 329 0.053
mitotic cell cycle phase transition GO:0044772 141 0.052
regulation of transcription from rna polymerase ii promoter in response to stress GO:0043618 51 0.051
purine nucleotide catabolic process GO:0006195 328 0.050
protein ubiquitination involved in ubiquitin dependent protein catabolic process GO:0042787 26 0.050
positive regulation of catabolic process GO:0009896 135 0.048
nucleoside metabolic process GO:0009116 394 0.048
meiotic cell cycle process GO:1903046 229 0.047
negative regulation of rna biosynthetic process GO:1902679 260 0.047
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.047
ribonucleoside monophosphate metabolic process GO:0009161 265 0.046
atp catabolic process GO:0006200 224 0.045
purine nucleoside monophosphate metabolic process GO:0009126 262 0.045
regulation of biological quality GO:0065008 391 0.045
positive regulation of cellular biosynthetic process GO:0031328 336 0.044
ribonucleoside triphosphate catabolic process GO:0009203 327 0.042
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.042
glycosyl compound metabolic process GO:1901657 398 0.042
purine ribonucleoside metabolic process GO:0046128 380 0.041
nucleoside phosphate metabolic process GO:0006753 458 0.041
homeostatic process GO:0042592 227 0.040
ribonucleotide metabolic process GO:0009259 377 0.039
nitrogen compound transport GO:0071705 212 0.039
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.038
regulation of organelle organization GO:0033043 243 0.037
organonitrogen compound catabolic process GO:1901565 404 0.037
monosaccharide metabolic process GO:0005996 83 0.037
negative regulation of cellular biosynthetic process GO:0031327 312 0.037
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 137 0.036
ribose phosphate metabolic process GO:0019693 384 0.036
establishment of organelle localization GO:0051656 96 0.035
regulation of intracellular signal transduction GO:1902531 78 0.035
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.035
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.034
regulation of signal transduction GO:0009966 114 0.034
ribonucleotide catabolic process GO:0009261 327 0.033
double strand break repair GO:0006302 105 0.033
purine ribonucleotide metabolic process GO:0009150 372 0.033
positive regulation of rna biosynthetic process GO:1902680 286 0.032
positive regulation of rna metabolic process GO:0051254 294 0.032
regulation of signaling GO:0023051 119 0.031
ascospore formation GO:0030437 107 0.030
regulation of gene expression epigenetic GO:0040029 147 0.030
purine nucleoside monophosphate catabolic process GO:0009128 224 0.030
organelle assembly GO:0070925 118 0.030
reproductive process GO:0022414 248 0.029
phosphorylation GO:0016310 291 0.029
chromatin silencing GO:0006342 147 0.028
purine ribonucleoside monophosphate catabolic process GO:0009169 224 0.027
cellular response to abiotic stimulus GO:0071214 62 0.027
anatomical structure formation involved in morphogenesis GO:0048646 136 0.026
organic acid metabolic process GO:0006082 352 0.026
positive regulation of cellular catabolic process GO:0031331 128 0.024
positive regulation of macromolecule metabolic process GO:0010604 394 0.024
regulation of protein metabolic process GO:0051246 237 0.023
intracellular protein transport GO:0006886 319 0.023
chromatin remodeling GO:0006338 80 0.023
mitotic sister chromatid segregation GO:0000070 85 0.023
regulation of cell communication GO:0010646 124 0.022
rrna metabolic process GO:0016072 244 0.022
regulation of cellular component organization GO:0051128 334 0.022
sexual reproduction GO:0019953 216 0.022
regulation of phosphate metabolic process GO:0019220 230 0.021
oxoacid metabolic process GO:0043436 351 0.021
protein transport GO:0015031 345 0.021
regulation of catabolic process GO:0009894 199 0.021
regulation of phosphorus metabolic process GO:0051174 230 0.020
dna dependent dna replication GO:0006261 115 0.020
nucleoside monophosphate catabolic process GO:0009125 224 0.020
regulation of cellular catabolic process GO:0031329 195 0.020
response to uv GO:0009411 4 0.020
response to inorganic substance GO:0010035 47 0.020
nucleocytoplasmic transport GO:0006913 163 0.020
organic acid transport GO:0015849 77 0.020
cell development GO:0048468 107 0.019
negative regulation of cellular metabolic process GO:0031324 407 0.019
generation of precursor metabolites and energy GO:0006091 147 0.019
cellular amino acid metabolic process GO:0006520 225 0.019
rna transport GO:0050658 92 0.018
ribonucleoside monophosphate catabolic process GO:0009158 224 0.018
multi organism reproductive process GO:0044703 216 0.018
gene silencing GO:0016458 151 0.018
positive regulation of organelle organization GO:0010638 85 0.018
small molecule catabolic process GO:0044282 88 0.017
positive regulation of apoptotic process GO:0043065 3 0.017
single organism carbohydrate metabolic process GO:0044723 237 0.017
nuclear division GO:0000280 263 0.017
cell cycle g1 s phase transition GO:0044843 64 0.017
cellular modified amino acid metabolic process GO:0006575 51 0.016
regulation of dna metabolic process GO:0051052 100 0.016
death GO:0016265 30 0.015
spindle pole body organization GO:0051300 33 0.015
carbohydrate derivative biosynthetic process GO:1901137 181 0.015
response to organic cyclic compound GO:0014070 1 0.015
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.015
gtp metabolic process GO:0046039 107 0.014
regulation of cell division GO:0051302 113 0.014
single organism carbohydrate catabolic process GO:0044724 73 0.014
organophosphate biosynthetic process GO:0090407 182 0.014
regulation of lipid catabolic process GO:0050994 4 0.014
cellular carbohydrate catabolic process GO:0044275 33 0.014
response to external stimulus GO:0009605 158 0.014
ncrna processing GO:0034470 330 0.014
regulation of gene silencing GO:0060968 41 0.014
vesicle mediated transport GO:0016192 335 0.013
regulation of lipid metabolic process GO:0019216 45 0.013
replicative cell aging GO:0001302 46 0.013
intracellular signal transduction GO:0035556 112 0.013
vacuolar transport GO:0007034 145 0.013
positive regulation of programmed cell death GO:0043068 3 0.013
regulation of cellular ketone metabolic process GO:0010565 42 0.013
apoptotic process GO:0006915 30 0.013
cell growth GO:0016049 89 0.013
rrna processing GO:0006364 227 0.013
single organism reproductive process GO:0044702 159 0.012
regulation of catalytic activity GO:0050790 307 0.012
positive regulation of hydrolase activity GO:0051345 112 0.012
positive regulation of cell death GO:0010942 3 0.012
cellular response to starvation GO:0009267 90 0.012
positive regulation of purine nucleotide metabolic process GO:1900544 100 0.012
regulation of protein modification by small protein conjugation or removal GO:1903320 29 0.012
negative regulation of gene expression epigenetic GO:0045814 147 0.012
cytoskeleton organization GO:0007010 230 0.012
rna localization GO:0006403 112 0.012
positive regulation of nucleotide metabolic process GO:0045981 101 0.012
cellular developmental process GO:0048869 191 0.012
protein localization to organelle GO:0033365 337 0.012
positive regulation of molecular function GO:0044093 185 0.012
response to hypoxia GO:0001666 4 0.012
microtubule organizing center organization GO:0031023 33 0.012
establishment of protein localization to organelle GO:0072594 278 0.012
sporulation GO:0043934 132 0.012
posttranscriptional regulation of gene expression GO:0010608 115 0.012
response to chemical GO:0042221 390 0.011
regulation of cellular protein metabolic process GO:0032268 232 0.011
covalent chromatin modification GO:0016569 119 0.011
alcohol metabolic process GO:0006066 112 0.011
transcription coupled nucleotide excision repair GO:0006283 16 0.011
microtubule based process GO:0007017 117 0.011
response to freezing GO:0050826 4 0.011
cellular response to extracellular stimulus GO:0031668 150 0.011
regulation of chromatin silencing GO:0031935 39 0.011
non recombinational repair GO:0000726 33 0.011
protein complex assembly GO:0006461 302 0.011
establishment of protein localization GO:0045184 367 0.011
regulation of metal ion transport GO:0010959 2 0.010
organic acid biosynthetic process GO:0016053 152 0.010
histone modification GO:0016570 119 0.010
regulation of translation GO:0006417 89 0.010
response to extracellular stimulus GO:0009991 156 0.010
small molecule biosynthetic process GO:0044283 258 0.010
organic hydroxy compound metabolic process GO:1901615 125 0.010
carboxylic acid catabolic process GO:0046395 71 0.010
protein phosphorylation GO:0006468 197 0.010
nuclear export GO:0051168 124 0.010

RAD4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of cellular proliferation DOID:14566 0 0.010