Saccharomyces cerevisiae

53 known processes

VAM3 (YOR106W)

Vam3p

(Aliases: PTH1)

VAM3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
vesicle mediated transport GO:0016192 335 0.990
vesicle fusion GO:0006906 33 0.978
vacuole fusion non autophagic GO:0042144 40 0.932
single organism membrane fusion GO:0044801 71 0.871
autophagy GO:0006914 106 0.784
single organism membrane organization GO:0044802 275 0.737
membrane organization GO:0061024 276 0.673
membrane fusion GO:0061025 73 0.618
golgi vesicle transport GO:0048193 188 0.614
Yeast
protein targeting to vacuole GO:0006623 91 0.484
Yeast
intracellular protein transport GO:0006886 319 0.482
Yeast
vesicle organization GO:0016050 68 0.410
regulation of protein complex assembly GO:0043254 77 0.359
vacuole organization GO:0007033 75 0.358
organelle fusion GO:0048284 85 0.358
post golgi vesicle mediated transport GO:0006892 72 0.310
Yeast
multi organism reproductive process GO:0044703 216 0.305
vacuole fusion GO:0097576 40 0.297
regulation of cellular component organization GO:0051128 334 0.292
protein transport GO:0015031 345 0.286
Yeast
sexual reproduction GO:0019953 216 0.270
establishment of protein localization GO:0045184 367 0.269
Yeast
regulation of organelle organization GO:0033043 243 0.254
single organism catabolic process GO:0044712 619 0.226
single organism cellular localization GO:1902580 375 0.209
Yeast
vacuolar transport GO:0007034 145 0.162
Yeast
multi organism process GO:0051704 233 0.145
organelle localization GO:0051640 128 0.135
protein complex biogenesis GO:0070271 314 0.124
signal transduction GO:0007165 208 0.122
protein complex assembly GO:0006461 302 0.115
carbohydrate derivative catabolic process GO:1901136 339 0.112
nitrogen compound transport GO:0071705 212 0.110
nucleobase containing compound transport GO:0015931 124 0.099
cellular protein complex assembly GO:0043623 209 0.096
organophosphate metabolic process GO:0019637 597 0.096
Yeast
endosomal transport GO:0016197 86 0.086
reproductive process GO:0022414 248 0.085
purine nucleoside triphosphate metabolic process GO:0009144 356 0.084
growth GO:0040007 157 0.083
negative regulation of signal transduction GO:0009968 30 0.080
purine ribonucleotide catabolic process GO:0009154 327 0.077
protein targeting GO:0006605 272 0.069
Yeast
regulation of response to stimulus GO:0048583 157 0.065
establishment of organelle localization GO:0051656 96 0.065
rna transport GO:0050658 92 0.065
regulation of cellular component biogenesis GO:0044087 112 0.064
retrograde transport endosome to golgi GO:0042147 33 0.063
reproduction of a single celled organism GO:0032505 191 0.062
protein localization to organelle GO:0033365 337 0.060
Yeast
positive regulation of molecular function GO:0044093 185 0.059
transcription from rna polymerase i promoter GO:0006360 63 0.056
single organism membrane invagination GO:1902534 43 0.055
single organism signaling GO:0044700 208 0.054
ribonucleotide catabolic process GO:0009261 327 0.052
endocytosis GO:0006897 90 0.052
Yeast
regulation of localization GO:0032879 127 0.049
chemical homeostasis GO:0048878 137 0.048
meiotic cell cycle process GO:1903046 229 0.048
regulation of molecular function GO:0065009 320 0.047
signaling GO:0023052 208 0.046
purine nucleotide metabolic process GO:0006163 376 0.043
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.043
purine ribonucleoside catabolic process GO:0046130 330 0.043
glycosyl compound metabolic process GO:1901657 398 0.040
negative regulation of response to stimulus GO:0048585 40 0.040
mitotic cell cycle process GO:1903047 294 0.039
establishment of protein localization to organelle GO:0072594 278 0.039
Yeast
establishment of protein localization to vacuole GO:0072666 91 0.038
Yeast
cytokinesis GO:0000910 92 0.038
protein localization to vacuole GO:0072665 92 0.038
Yeast
nucleoside triphosphate catabolic process GO:0009143 329 0.038
organonitrogen compound catabolic process GO:1901565 404 0.038
cellular developmental process GO:0048869 191 0.036
single organism reproductive process GO:0044702 159 0.035
meiotic cell cycle GO:0051321 272 0.034
heterocycle catabolic process GO:0046700 494 0.034
regulation of cell cycle GO:0051726 195 0.034
macromolecule catabolic process GO:0009057 383 0.033
purine containing compound metabolic process GO:0072521 400 0.033
cytoskeleton dependent cytokinesis GO:0061640 65 0.032
ribose phosphate metabolic process GO:0019693 384 0.032
anatomical structure development GO:0048856 160 0.031
nucleotide metabolic process GO:0009117 453 0.031
cellular macromolecule catabolic process GO:0044265 363 0.031
regulation of biological quality GO:0065008 391 0.030
establishment of rna localization GO:0051236 92 0.030
purine ribonucleoside metabolic process GO:0046128 380 0.029
cell development GO:0048468 107 0.028
aromatic compound catabolic process GO:0019439 491 0.028
regulation of vacuole fusion non autophagic GO:0032889 14 0.028
nucleoside catabolic process GO:0009164 335 0.028
positive regulation of cellular protein metabolic process GO:0032270 89 0.027
cellular response to chemical stimulus GO:0070887 315 0.027
response to organic substance GO:0010033 182 0.027
anatomical structure morphogenesis GO:0009653 160 0.027
regulation of signal transduction GO:0009966 114 0.026
gtp catabolic process GO:0006184 107 0.026
purine nucleoside triphosphate catabolic process GO:0009146 329 0.025
fungal type cell wall organization GO:0031505 145 0.025
response to external stimulus GO:0009605 158 0.025
negative regulation of rna biosynthetic process GO:1902679 260 0.025
cellular response to pheromone GO:0071444 88 0.025
regulation of vacuole organization GO:0044088 20 0.024
glycosyl compound catabolic process GO:1901658 335 0.024
ribonucleoside triphosphate catabolic process GO:0009203 327 0.024
nuclear division GO:0000280 263 0.023
regulation of catalytic activity GO:0050790 307 0.023
establishment of cell polarity GO:0030010 64 0.022
organophosphate biosynthetic process GO:0090407 182 0.022
nucleoside phosphate metabolic process GO:0006753 458 0.022
response to abiotic stimulus GO:0009628 159 0.022
developmental process GO:0032502 261 0.021
late endosome to vacuole transport GO:0045324 42 0.020
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.020
ion transport GO:0006811 274 0.020
cellular chemical homeostasis GO:0055082 123 0.020
response to organic cyclic compound GO:0014070 1 0.020
nucleocytoplasmic transport GO:0006913 163 0.019
negative regulation of signaling GO:0023057 30 0.019
rna localization GO:0006403 112 0.019
chromatin organization GO:0006325 242 0.019
purine nucleotide catabolic process GO:0006195 328 0.019
negative regulation of cell communication GO:0010648 33 0.019
golgi to plasma membrane transport GO:0006893 33 0.019
gtp metabolic process GO:0046039 107 0.019
purine nucleoside catabolic process GO:0006152 330 0.018
phosphorylation of rna polymerase ii c terminal domain GO:0070816 20 0.018
microautophagy GO:0016237 43 0.018
reproductive process in single celled organism GO:0022413 145 0.018
ribonucleoside catabolic process GO:0042454 332 0.018
endomembrane system organization GO:0010256 74 0.018
regulation of signaling GO:0023051 119 0.018
purine nucleoside metabolic process GO:0042278 380 0.018
peroxisome organization GO:0007031 68 0.018
nucleic acid transport GO:0050657 94 0.017
response to chemical GO:0042221 390 0.017
nucleobase containing small molecule metabolic process GO:0055086 491 0.017
mitotic cell cycle GO:0000278 306 0.017
cell division GO:0051301 205 0.017
organelle fission GO:0048285 272 0.016
snare complex assembly GO:0035493 10 0.016
regulation of transport GO:0051049 85 0.016
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.016
protein localization to membrane GO:0072657 102 0.016
cell surface receptor signaling pathway GO:0007166 38 0.016
positive regulation of gene expression GO:0010628 321 0.016
establishment or maintenance of cell polarity GO:0007163 96 0.016
regulation of cellular ketone metabolic process GO:0010565 42 0.016
ascospore formation GO:0030437 107 0.015
nucleobase containing compound catabolic process GO:0034655 479 0.015
homeostatic process GO:0042592 227 0.015
carbohydrate derivative metabolic process GO:1901135 549 0.015
Yeast
cellular component morphogenesis GO:0032989 97 0.015
mitotic cytokinesis GO:0000281 58 0.015
cytokinetic process GO:0032506 78 0.015
regulation of cell communication GO:0010646 124 0.014
aging GO:0007568 71 0.014
purine ribonucleotide metabolic process GO:0009150 372 0.014
cellular nitrogen compound catabolic process GO:0044270 494 0.013
organelle inheritance GO:0048308 51 0.013
Yeast
ribonucleotide metabolic process GO:0009259 377 0.013
macroautophagy GO:0016236 55 0.013
single organism developmental process GO:0044767 258 0.013
lipid localization GO:0010876 60 0.012
anion transport GO:0006820 145 0.012
death GO:0016265 30 0.012
nucleotide catabolic process GO:0009166 330 0.012
protein modification by small protein conjugation GO:0032446 144 0.011
organophosphate catabolic process GO:0046434 338 0.011
positive regulation of response to stimulus GO:0048584 37 0.011
ribonucleoside metabolic process GO:0009119 389 0.011
nucleoside triphosphate metabolic process GO:0009141 364 0.011
carbohydrate metabolic process GO:0005975 252 0.011
guanosine containing compound catabolic process GO:1901069 109 0.011
cytoskeleton organization GO:0007010 230 0.011
organic cyclic compound catabolic process GO:1901361 499 0.011
rna catabolic process GO:0006401 118 0.010
positive regulation of cellular component organization GO:0051130 116 0.010
vesicle docking GO:0048278 16 0.010

VAM3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.011