Saccharomyces cerevisiae

151 known processes

PPH3 (YDR075W)

Pph3p

PPH3 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
negative regulation of cell cycle GO:0045786 91 0.917
negative regulation of cell cycle process GO:0010948 86 0.840
regulation of cell cycle GO:0051726 195 0.717
regulation of cell cycle process GO:0010564 150 0.706
regulation of cellular response to stress GO:0080135 50 0.661
negative regulation of gene expression GO:0010629 312 0.657
Yeast
meiotic cell cycle process GO:1903046 229 0.616
nuclear division GO:0000280 263 0.614
Yeast Worm
cellular response to dna damage stimulus GO:0006974 287 0.574
signaling GO:0023052 208 0.570
regulation of response to stress GO:0080134 57 0.554
cell cycle checkpoint GO:0000075 82 0.468
cell communication GO:0007154 345 0.464
negative regulation of macromolecule metabolic process GO:0010605 375 0.455
Yeast
negative regulation of rna biosynthetic process GO:1902679 260 0.455
organelle fission GO:0048285 272 0.449
Yeast Worm
negative regulation of cellular biosynthetic process GO:0031327 312 0.443
signal transduction GO:0007165 208 0.389
single organism signaling GO:0044700 208 0.373
meiotic cell cycle GO:0051321 272 0.373
negative regulation of cellular metabolic process GO:0031324 407 0.345
Yeast
intracellular signal transduction GO:0035556 112 0.311
regulation of cellular component organization GO:0051128 334 0.301
gene silencing GO:0016458 151 0.290
regulation of cellular protein metabolic process GO:0032268 232 0.289
Yeast
cellular macromolecule catabolic process GO:0044265 363 0.288
Yeast
mitotic cell cycle process GO:1903047 294 0.284
Yeast Worm
positive regulation of gene expression GO:0010628 321 0.284
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.282
double strand break repair GO:0006302 105 0.281
regulation of meiotic cell cycle GO:0051445 43 0.273
cell division GO:0051301 205 0.272
Yeast
regulation of nuclear division GO:0051783 103 0.256
negative regulation of transcription dna templated GO:0045892 258 0.237
dephosphorylation GO:0016311 127 0.236
mitotic cell cycle GO:0000278 306 0.231
Yeast Worm Fly
negative regulation of nucleic acid templated transcription GO:1903507 260 0.228
methylation GO:0032259 101 0.226
peptidyl amino acid modification GO:0018193 116 0.219
positive regulation of cellular biosynthetic process GO:0031328 336 0.216
positive regulation of macromolecule metabolic process GO:0010604 394 0.215
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.207
response to organic substance GO:0010033 182 0.205
sexual reproduction GO:0019953 216 0.196
positive regulation of protein metabolic process GO:0051247 93 0.190
negative regulation of rna metabolic process GO:0051253 262 0.188
protein dephosphorylation GO:0006470 40 0.186
cellular response to organic substance GO:0071310 159 0.180
negative regulation of biosynthetic process GO:0009890 312 0.168
organelle localization GO:0051640 128 0.164
g1 s transition of mitotic cell cycle GO:0000082 64 0.162
Yeast
cellular response to chemical stimulus GO:0070887 315 0.160
regulation of protein metabolic process GO:0051246 237 0.159
Yeast
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.157
growth of unicellular organism as a thread of attached cells GO:0070783 105 0.155
cell cycle phase transition GO:0044770 144 0.153
regulation of cell communication GO:0010646 124 0.150
filamentous growth GO:0030447 124 0.148
negative regulation of gene expression epigenetic GO:0045814 147 0.147
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.143
regulation of response to external stimulus GO:0032101 20 0.143
cell cycle g1 s phase transition GO:0044843 64 0.123
Yeast
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.123
regulation of autophagy GO:0010506 18 0.119
positive regulation of response to stimulus GO:0048584 37 0.117
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.115
budding cell bud growth GO:0007117 29 0.113
positive regulation of rna metabolic process GO:0051254 294 0.112
regulation of translation GO:0006417 89 0.110
Yeast
negative regulation of response to stimulus GO:0048585 40 0.109
translation GO:0006412 230 0.109
Yeast
response to oxidative stress GO:0006979 99 0.107
negative regulation of meiotic cell cycle GO:0051447 24 0.104
dna damage checkpoint GO:0000077 29 0.103
regulation of meiosis GO:0040020 42 0.102
multi organism cellular process GO:0044764 120 0.098
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.097
growth GO:0040007 157 0.097
proteasomal protein catabolic process GO:0010498 141 0.096
Yeast
endocytosis GO:0006897 90 0.095
proteolysis involved in cellular protein catabolic process GO:0051603 198 0.094
Yeast
multi organism process GO:0051704 233 0.093
Worm
negative regulation of mitotic cell cycle phase transition GO:1901991 57 0.092
Yeast
cellular response to oxygen containing compound GO:1901701 43 0.091
positive regulation of biosynthetic process GO:0009891 336 0.091
regulation of response to dna damage stimulus GO:2001020 17 0.090
regulation of cellular component biogenesis GO:0044087 112 0.090
ncrna processing GO:0034470 330 0.084
positive regulation of cellular protein metabolic process GO:0032270 89 0.082
positive regulation of rna biosynthetic process GO:1902680 286 0.081
macroautophagy GO:0016236 55 0.080
regulation of gene expression epigenetic GO:0040029 147 0.077
dna recombination GO:0006310 172 0.076
covalent chromatin modification GO:0016569 119 0.074
positive regulation of transcription dna templated GO:0045893 286 0.074
cell growth GO:0016049 89 0.073
chromatin silencing GO:0006342 147 0.072
meiosis i GO:0007127 92 0.071
histone modification GO:0016570 119 0.071
phosphorylation GO:0016310 291 0.071
cellular component movement GO:0006928 20 0.069
reproduction of a single celled organism GO:0032505 191 0.068
regulation of organelle organization GO:0033043 243 0.067
response to pheromone GO:0019236 92 0.067
positive regulation of nucleic acid templated transcription GO:1903508 286 0.066
actin cytoskeleton organization GO:0030036 100 0.066
developmental process GO:0032502 261 0.064
Zebrafish Worm Fly
vesicle mediated transport GO:0016192 335 0.064
mitotic cell cycle phase transition GO:0044772 141 0.062
Yeast
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.062
single organism developmental process GO:0044767 258 0.062
Zebrafish Worm Fly
modification dependent macromolecule catabolic process GO:0043632 203 0.060
Yeast
response to organic cyclic compound GO:0014070 1 0.060
meiotic nuclear division GO:0007126 163 0.060
Worm
macromolecule catabolic process GO:0009057 383 0.059
Yeast
reproductive process GO:0022414 248 0.058
Worm
trna modification GO:0006400 75 0.055
positive regulation of phosphate metabolic process GO:0045937 147 0.054
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.053
peptidyl lysine modification GO:0018205 77 0.053
positive regulation of transferase activity GO:0051347 28 0.053
negative regulation of cell cycle phase transition GO:1901988 59 0.051
regulation of dna templated transcription elongation GO:0032784 44 0.051
transcription from rna polymerase iii promoter GO:0006383 40 0.051
aging GO:0007568 71 0.051
negative regulation of mitotic cell cycle GO:0045930 63 0.050
Yeast
cell fate commitment GO:0045165 32 0.050
establishment of protein localization GO:0045184 367 0.049
response to hexose GO:0009746 13 0.049
positive regulation of translation GO:0045727 34 0.048
positive regulation of cell communication GO:0010647 28 0.048
autophagy GO:0006914 106 0.047
response to chemical GO:0042221 390 0.047
trna processing GO:0008033 101 0.046
regulation of biological quality GO:0065008 391 0.046
response to monosaccharide GO:0034284 13 0.046
mapk cascade GO:0000165 30 0.045
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.045
regulation of response to stimulus GO:0048583 157 0.044
negative regulation of cell division GO:0051782 66 0.044
positive regulation of protein modification process GO:0031401 49 0.043
positive regulation of cellular component organization GO:0051130 116 0.043
positive regulation of intracellular signal transduction GO:1902533 16 0.043
cell budding GO:0007114 48 0.042
regulation of response to extracellular stimulus GO:0032104 20 0.041
regulation of cell cycle phase transition GO:1901987 70 0.041
cellular homeostasis GO:0019725 138 0.040
protein alkylation GO:0008213 48 0.040
dna replication GO:0006260 147 0.039
positive regulation of molecular function GO:0044093 185 0.037
positive regulation of dna templated transcription elongation GO:0032786 42 0.037
response to glucose GO:0009749 13 0.037
cellular response to oxidative stress GO:0034599 94 0.037
nucleus organization GO:0006997 62 0.037
ubiquitin dependent protein catabolic process GO:0006511 181 0.037
Yeast
response to abiotic stimulus GO:0009628 159 0.036
regulation of intracellular signal transduction GO:1902531 78 0.035
programmed cell death GO:0012501 30 0.034
positive regulation of organelle organization GO:0010638 85 0.034
protein catabolic process GO:0030163 221 0.034
Yeast
macromolecule methylation GO:0043414 85 0.034
negative regulation of catabolic process GO:0009895 43 0.034
Yeast
actin filament based process GO:0030029 104 0.033
response to starvation GO:0042594 96 0.033
regulation of cell division GO:0051302 113 0.033
death GO:0016265 30 0.032
internal protein amino acid acetylation GO:0006475 52 0.032
protein phosphorylation GO:0006468 197 0.031
aromatic compound catabolic process GO:0019439 491 0.031
regulation of catabolic process GO:0009894 199 0.031
Yeast
multi organism reproductive process GO:0044703 216 0.030
Worm
regulation of dna metabolic process GO:0051052 100 0.030
asexual reproduction GO:0019954 48 0.030
small gtpase mediated signal transduction GO:0007264 36 0.030
cellular developmental process GO:0048869 191 0.029
Zebrafish Fly
regulation of cytoskeleton organization GO:0051493 63 0.029
negative regulation of cellular component organization GO:0051129 109 0.029
cellular protein catabolic process GO:0044257 213 0.028
Yeast
protein maturation GO:0051604 76 0.028
Yeast
response to osmotic stress GO:0006970 83 0.028
mrna catabolic process GO:0006402 93 0.028
dna repair GO:0006281 236 0.027
positive regulation of phosphorylation GO:0042327 33 0.027
cellular response to pheromone GO:0071444 88 0.027
posttranscriptional regulation of gene expression GO:0010608 115 0.027
Yeast
regulation of macroautophagy GO:0016241 15 0.027
mitotic nuclear division GO:0007067 131 0.027
Yeast
chemical homeostasis GO:0048878 137 0.027
pseudohyphal growth GO:0007124 75 0.027
apoptotic process GO:0006915 30 0.026
negative regulation of signaling GO:0023057 30 0.026
regulation of actin filament based process GO:0032970 31 0.025
negative regulation of signal transduction GO:0009968 30 0.025
regulation of molecular function GO:0065009 320 0.025
dna templated transcription elongation GO:0006354 91 0.025
positive regulation of cell death GO:0010942 3 0.025
negative regulation of nuclear division GO:0051784 62 0.025
filamentous growth of a population of unicellular organisms GO:0044182 109 0.024
regulation of proteolysis GO:0030162 44 0.024
Yeast
positive regulation of phosphorus metabolic process GO:0010562 147 0.024
positive regulation of cellular catabolic process GO:0031331 128 0.023
negative regulation of protein metabolic process GO:0051248 85 0.023
Yeast
proteolysis GO:0006508 268 0.022
Yeast
anatomical structure development GO:0048856 160 0.022
Zebrafish Worm Fly
ion transport GO:0006811 274 0.022
rrna containing ribonucleoprotein complex export from nucleus GO:0071428 46 0.022
regulation of signal transduction GO:0009966 114 0.022
regulation of mitotic cell cycle GO:0007346 107 0.022
Yeast Fly
mrna metabolic process GO:0016071 269 0.021
single organism reproductive process GO:0044702 159 0.021
conjugation with cellular fusion GO:0000747 106 0.021
intracellular protein transport GO:0006886 319 0.021
regulation of cellular catabolic process GO:0031329 195 0.021
Yeast
single organism cellular localization GO:1902580 375 0.021
positive regulation of intracellular protein transport GO:0090316 3 0.021
regulation of actin cytoskeleton organization GO:0032956 31 0.021
ribonucleoprotein complex localization GO:0071166 46 0.021
peptidyl lysine acetylation GO:0018394 52 0.021
positive regulation of apoptotic process GO:0043065 3 0.020
nuclear transcribed mrna catabolic process GO:0000956 89 0.020
mitochondrion organization GO:0007005 261 0.020
regulation of signaling GO:0023051 119 0.020
nucleocytoplasmic transport GO:0006913 163 0.020
organic cyclic compound catabolic process GO:1901361 499 0.019
protein localization to nucleus GO:0034504 74 0.019
heterocycle catabolic process GO:0046700 494 0.019
protein methylation GO:0006479 48 0.019
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 137 0.019
Yeast
cellular nitrogen compound catabolic process GO:0044270 494 0.019
regulation of protein localization GO:0032880 62 0.019
endosomal transport GO:0016197 86 0.019
trna metabolic process GO:0006399 151 0.019
organophosphate biosynthetic process GO:0090407 182 0.019
signal transduction by phosphorylation GO:0023014 31 0.019
recombinational repair GO:0000725 64 0.018
response to heat GO:0009408 69 0.018
positive regulation of catabolic process GO:0009896 135 0.018
ras protein signal transduction GO:0007265 29 0.018
negative regulation of molecular function GO:0044092 68 0.018
cell surface receptor signaling pathway GO:0007166 38 0.017
regulation of transcription from rna polymerase i promoter GO:0006356 36 0.017
regulation of protein processing GO:0070613 34 0.017
Yeast
internal peptidyl lysine acetylation GO:0018393 52 0.017
response to oxygen containing compound GO:1901700 61 0.017
protein localization to organelle GO:0033365 337 0.017
positive regulation of kinase activity GO:0033674 24 0.017
single organism catabolic process GO:0044712 619 0.017
Yeast
rna modification GO:0009451 99 0.016
dna dependent dna replication GO:0006261 115 0.016
regulation of mitotic cell cycle phase transition GO:1901990 68 0.015
Yeast
rrna processing GO:0006364 227 0.015
negative regulation of proteolysis GO:0045861 33 0.015
Yeast
chromatin modification GO:0016568 200 0.015
developmental process involved in reproduction GO:0003006 159 0.015
alpha amino acid biosynthetic process GO:1901607 91 0.015
cell differentiation GO:0030154 161 0.015
Zebrafish Fly
positive regulation of cytoskeleton organization GO:0051495 39 0.015
regulation of transcription elongation from rna polymerase ii promoter GO:0034243 40 0.014
cell death GO:0008219 30 0.014
regulation of protein modification process GO:0031399 110 0.014
positive regulation of programmed cell death GO:0043068 3 0.014
nucleobase containing compound catabolic process GO:0034655 479 0.014
protein complex biogenesis GO:0070271 314 0.014
homeostatic process GO:0042592 227 0.014
positive regulation of signal transduction GO:0009967 20 0.014
cellular lipid metabolic process GO:0044255 229 0.014
cellular chemical homeostasis GO:0055082 123 0.014
protein export from nucleus GO:0006611 17 0.014
cytoskeleton dependent cytokinesis GO:0061640 65 0.014
positive regulation of intracellular transport GO:0032388 4 0.014
regulation of catalytic activity GO:0050790 307 0.014
cellular response to glucose stimulus GO:0071333 8 0.014
positive regulation of transcription elongation from rna polymerase ii promoter GO:0032968 38 0.013
cell aging GO:0007569 70 0.013
mitotic cell cycle checkpoint GO:0007093 56 0.013
Yeast
invasive growth in response to glucose limitation GO:0001403 61 0.013
histone acetylation GO:0016573 51 0.013
regulation of anatomical structure size GO:0090066 50 0.013
response to extracellular stimulus GO:0009991 156 0.013
cellular amine metabolic process GO:0044106 51 0.013
regulation of gtp catabolic process GO:0033124 84 0.013
ribonucleoprotein complex export from nucleus GO:0071426 46 0.013
sporulation resulting in formation of a cellular spore GO:0030435 129 0.013
regulation of phosphorus metabolic process GO:0051174 230 0.013
regulation of protein phosphorylation GO:0001932 75 0.012
cellular response to nutrient levels GO:0031669 144 0.012
protein acylation GO:0043543 66 0.012
establishment of protein localization to organelle GO:0072594 278 0.012
ribonucleotide catabolic process GO:0009261 327 0.012
translational initiation GO:0006413 56 0.012
conjugation GO:0000746 107 0.012
stress activated mapk cascade GO:0051403 4 0.012
gtp catabolic process GO:0006184 107 0.012
protein transport GO:0015031 345 0.012
response to nitrogen compound GO:1901698 18 0.012
anatomical structure morphogenesis GO:0009653 160 0.012
Zebrafish
regulation of dna dependent dna replication GO:0090329 37 0.012
protein processing GO:0016485 64 0.012
Yeast
ribosome biogenesis GO:0042254 335 0.012
negative regulation of phosphorus metabolic process GO:0010563 49 0.011
regulation of dna replication GO:0006275 51 0.011
single organism carbohydrate metabolic process GO:0044723 237 0.011
Yeast
positive regulation of catalytic activity GO:0043085 178 0.011
positive regulation of nucleocytoplasmic transport GO:0046824 4 0.011
regulation of gtpase activity GO:0043087 84 0.011
cellular response to extracellular stimulus GO:0031668 150 0.011
double strand break repair via homologous recombination GO:0000724 54 0.011
protein modification by small protein conjugation or removal GO:0070647 172 0.011
nucleoside triphosphate catabolic process GO:0009143 329 0.011
positive regulation of sequence specific dna binding transcription factor activity GO:0051091 2 0.011
lipid metabolic process GO:0006629 269 0.011
regulation of localization GO:0032879 127 0.011
negative regulation of meiosis GO:0045835 23 0.011
response to nutrient levels GO:0031667 150 0.011
cellular response to external stimulus GO:0071496 150 0.011
negative regulation of cellular protein metabolic process GO:0032269 85 0.011
Yeast
modification dependent protein catabolic process GO:0019941 181 0.011
Yeast
regulation of protein maturation GO:1903317 34 0.010
Yeast
stress activated protein kinase signaling cascade GO:0031098 4 0.010
response to uv GO:0009411 4 0.010
rrna metabolic process GO:0016072 244 0.010
negative regulation of intracellular signal transduction GO:1902532 27 0.010

PPH3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org