IMP
Process View
trachea formation
The process pertaining to the initial formation of a trachea from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the trachea is recognizable. The trachea is the portion of the airway that attaches to the bronchi as it branches.
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In addition to gene-name show these genes:
Click on a gene's description to view its network relationships with genes known to be involved in "trachea formation"
| Name | Description | Probability | Func Analog Organism | |
|---|---|---|---|---|
| Fgfr2 | fibroblast growth factor receptor 2 | 1.000 | ||
| Chrd | chordin | 1.000 | ||
| Pdgfra | platelet derived growth factor receptor, alpha polypeptide | 1.000 | ||
| Foxc1 | forkhead box C1 | 1.000 | ||
| Shh | sonic hedgehog | 1.000 | ||
| Tgfbr2 | transforming growth factor, beta receptor II | 1.000 | ||
| Tgfb2 | transforming growth factor, beta 2 | 1.000 | ||
| Prrx1 | paired related homeobox 1 | 1.000 | ||
| Sox9 | SRY-box containing gene 9 | 1.000 | ||
| Bmp7 | bone morphogenetic protein 7 | 0.998 | ||
| Acvr1 | activin A receptor, type 1 | 0.998 | Mouse | |
| Ednra | endothelin receptor type A | 0.998 | ||
| Hand2 | heart and neural crest derivatives expressed transcript 2 | 0.998 | ||
| Fgf8 | fibroblast growth factor 8 | 0.998 | ||
| Gli3 | GLI-Kruppel family member GLI3 | 0.997 | ||
| Fgfr1 | fibroblast growth factor receptor 1 | 0.997 | ||
| Nodal | nodal | 0.997 | ||
| Smo | smoothened homolog (Drosophila) | 0.997 | ||
| Bmp4 | bone morphogenetic protein 4 | 0.996 | ||
| Tcfap2a | transcription factor AP-2, alpha | 0.995 | ||
| Apc | adenomatosis polyposis coli | 0.991 | ||
| Ctnnb1 | catenin (cadherin associated protein), beta 1 | 0.990 | ||
| Foxc2 | forkhead box C2 | 0.988 | ||
| Msx1 | homeobox, msh-like 1 | 0.988 | ||
| Tbx1 | T-box 1 | 0.985 | ||
| Dlx5 | distal-less homeobox 5 | 0.982 | ||
| Pax3 | paired box gene 3 | 0.979 | ||
| Six1 | sine oculis-related homeobox 1 homolog (Drosophila) | 0.977 | ||
| Ece1 | endothelin converting enzyme 1 | 0.974 | ||
| Rarg | retinoic acid receptor, gamma | 0.973 | ||
| Hand1 | heart and neural crest derivatives expressed transcript 1 | 0.957 | ||
| Prrx2 | paired related homeobox 2 | 0.951 | ||
| Eya1 | eyes absent 1 homolog (Drosophila) | 0.948 | ||
| Vegfa | vascular endothelial growth factor A | 0.936 | ||
| Aldh1a2 | aldehyde dehydrogenase family 1, subfamily A2 | 0.848 | ||
| Rspo2 | R-spondin 2 homolog (Xenopus laevis) | 0.845 | ||
| Gsc | goosecoid homeobox | 0.831 | ||
| Rarb | retinoic acid receptor, beta | 0.811 | ||
| Runx2 | runt related transcription factor 2 | 0.754 | ||
| Gli2 | GLI-Kruppel family member GLI2 | 0.745 | ||
| Ror2 | receptor tyrosine kinase-like orphan receptor 2 | 0.725 | ||
| Pbx1 | pre B-cell leukemia transcription factor 1 | 0.724 | ||
| Fgfr3 | fibroblast growth factor receptor 3 | 0.724 | ||
| Rxra | retinoid X receptor alpha | 0.684 | ||
| Nkx2-5 | NK2 transcription factor related, locus 5 (Drosophila) | 0.678 | ||
| Pitx2 | paired-like homeodomain transcription factor 2 | 0.677 | ||
| Hoxa3 | homeobox A3 | 0.631 | ||
| Zic3 | zinc finger protein of the cerebellum 3 | 0.610 | ||
| Ptpn11 | protein tyrosine phosphatase, non-receptor type 11 | 0.609 | ||
| Tgfbr1 | transforming growth factor, beta receptor I | 0.607 | Mouse | |
| Rara | retinoic acid receptor, alpha | 0.601 | ||
| Bmp2 | bone morphogenetic protein 2 | 0.508 | Mouse | |
| Smad3 | MAD homolog 3 (Drosophila) | 0.506 | ||
| Ptch1 | patched homolog 1 | 0.505 | ||
| Mesp1 | mesoderm posterior 1 | 0.453 | ||
| Foxh1 | forkhead box H1 | 0.422 | ||
| Meox2 | mesenchyme homeobox 2 | 0.411 | ||
| Smad4 | MAD homolog 4 (Drosophila) | 0.402 | ||
| Hoxa1 | homeobox A1 | 0.399 | ||
| Pten | phosphatase and tensin homolog | 0.394 | ||
| Msx2 | homeobox, msh-like 2 | 0.391 | ||
| Otx2 | orthodenticle homolog 2 (Drosophila) | 0.389 | ||
| Alx4 | aristaless-like homeobox 4 | 0.389 | ||
| Gnaq | guanine nucleotide binding protein, alpha q polypeptide | 0.380 | ||
| Kif3a | kinesin family member 3A | 0.340 | ||
| Bmpr1a | bone morphogenetic protein receptor, type 1A | 0.330 | Mouse | |
| Nf1 | neurofibromatosis 1 | 0.286 | ||
| Lhcgr | luteinizing hormone/choriogonadotropin receptor | 0.262 | ||
| Tgfbr3 | transforming growth factor, beta receptor III | 0.253 | ||
| Dlx6 | distal-less homeobox 6 | 0.244 | ||
| Zeb1 | zinc finger E-box binding homeobox 1 | 0.243 | ||
| Six4 | sine oculis-related homeobox 4 homolog (Drosophila) | 0.227 | ||
| Gata4 | GATA binding protein 4 | 0.223 | ||
| Hoxa2 | homeobox A2 | 0.198 | ||
| Gdf3 | growth differentiation factor 3 | 0.198 | Mouse | |
| Lrp6 | low density lipoprotein receptor-related protein 6 | 0.190 | ||
| Pax2 | paired box gene 2 | 0.183 | ||
| Eng | endoglin | 0.150 | ||
| Cited2 | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 | 0.135 | ||
| Gja1 | gap junction protein, alpha 1 | 0.134 | ||
| Fgf10 | fibroblast growth factor 10 | 0.125 | ||
| Acvrl1 | activin A receptor, type II-like 1 | 0.115 | Mouse | |
| Gbx2 | gastrulation brain homeobox 2 | 0.112 | ||
| Tdgf1 | teratocarcinoma-derived growth factor 1 | 0.109 | ||
| Foxg1 | forkhead box G1 | 0.109 | ||
| Nog | noggin | 0.102 | ||
| Gata6 | GATA binding protein 6 | 0.101 | ||
| Phex | phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets) | 0.097 | ||
| Nos3 | nitric oxide synthase 3, endothelial cell | 0.096 | ||
| Hoxd13 | homeobox D13 | 0.089 | ||
| Bmper | BMP-binding endothelial regulator | 0.083 | ||
| Bmpr2 | bone morphogenic protein receptor, type II (serine/threonine kinase) | 0.081 | Mouse | |
| Jag1 | jagged 1 | 0.079 | ||
| Bmp5 | bone morphogenetic protein 5 | 0.078 | ||
| Nkx3-2 | NK3 homeobox 2 | 0.078 | ||
| Hspg2 | perlecan (heparan sulfate proteoglycan 2) | 0.078 | ||
| Pax9 | paired box gene 9 | 0.074 | ||
| Ror1 | receptor tyrosine kinase-like orphan receptor 1 | 0.071 | ||
| Mn1 | meningioma 1 | 0.070 | ||
| Hipk3 | homeodomain interacting protein kinase 3 | 0.063 | ||
| Vangl2 | vang-like 2 (van gogh, Drosophila) | 0.060 | ||
| Chd7 | chromodomain helicase DNA binding protein 7 | 0.059 | ||
| Gpc3 | glypican 3 | 0.057 | ||
| Isl1 | ISL1 transcription factor, LIM/homeodomain | 0.056 | ||
| Smad2 | MAD homolog 2 (Drosophila) | 0.054 | ||
| Alx3 | aristaless-like homeobox 3 | 0.054 | ||
| Pds5b | PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) | 0.053 | ||
| Xiap | X-linked inhibitor of apoptosis | 0.052 | ||
| Mkl2 | MKL/myocardin-like 2 | 0.052 | ||
| Gdf1 | growth differentiation factor 1 | 0.051 | Mouse | |
| Alx1 | ALX homeobox 1 | 0.051 | ||
| Inhba | inhibin beta-A | 0.049 | ||
| Zbtb7a | zinc finger and BTB domain containing 7a | 0.046 | ||
| Epas1 | endothelial PAS domain protein 1 | 0.045 | ||
| Ptpn14 | protein tyrosine phosphatase, non-receptor type 14 | 0.045 | ||
| Cdon | cell adhesion molecule-related/down-regulated by oncogenes | 0.044 | ||
| Psen1 | presenilin 1 | 0.043 | ||
| Foxf1a | forkhead box F1a | 0.042 | ||
| Csf2 | colony stimulating factor 2 (granulocyte-macrophage) | 0.042 | ||
| Twist2 | twist homolog 2 (Drosophila) | 0.042 | ||
| Tbx15 | T-box 15 | 0.039 | ||
| Fshr | follicle stimulating hormone receptor | 0.039 | ||
| Wnt3a | wingless-related MMTV integration site 3A | 0.039 | ||
| Inha | inhibin alpha | 0.038 | ||
| Dlx2 | distal-less homeobox 2 | 0.038 | ||
| Eomes | eomesodermin homolog (Xenopus laevis) | 0.037 | ||
| Ext1 | exostoses (multiple) 1 | 0.035 | ||
| Slc9a3r2 | solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 | 0.035 | ||
| Rptn | repetin | 0.035 | ||
| Fgfrl1 | fibroblast growth factor receptor-like 1 | 0.034 | ||
| Cacna2d1 | calcium channel, voltage-dependent, alpha2/delta subunit 1 | 0.033 | ||
| Fzd7 | frizzled homolog 7 (Drosophila) | 0.032 | ||
| Pax6 | paired box gene 6 | 0.032 | ||
| Twsg1 | twisted gastrulation homolog 1 (Drosophila) | 0.032 | ||
| Pla2g2a | phospholipase A2, group IIA (platelets, synovial fluid) | 0.030 | ||
| Smad5 | MAD homolog 5 (Drosophila) | 0.030 | ||
| Mecom | MDS1 and EVI1 complex locus | 0.030 | ||
| Smad1 | MAD homolog 1 (Drosophila) | 0.029 | ||
| Prkg1 | protein kinase, cGMP-dependent, type I | 0.029 | ||
| Esr1 | estrogen receptor 1 (alpha) | 0.028 | ||
| Hic1 | hypermethylated in cancer 1 | 0.028 | ||
| Il6st | interleukin 6 signal transducer | 0.027 | ||
| Sox4 | SRY-box containing gene 4 | 0.027 | ||
| Tcf15 | transcription factor 15 | 0.027 | ||
| Lefty1 | left right determination factor 1 | 0.027 | ||
| Pitx1 | paired-like homeodomain transcription factor 1 | 0.026 | ||
| Ndst1 | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 | 0.026 | ||
| Pkd1 | polycystic kidney disease 1 homolog | 0.026 | ||
| Fgf9 | fibroblast growth factor 9 | 0.026 | ||
| Ucp3 | uncoupling protein 3 (mitochondrial, proton carrier) | 0.025 | ||
| Pgr | progesterone receptor | 0.025 | ||
| Wnt5a | wingless-related MMTV integration site 5A | 0.025 | ||
| Cpd | carboxypeptidase D | 0.025 | ||
| Itga8 | integrin alpha 8 | 0.025 | ||
| Shc1 | src homology 2 domain-containing transforming protein C1 | 0.025 | ||
| Grb10 | growth factor receptor bound protein 10 | 0.024 | ||
| Cdkn2a | cyclin-dependent kinase inhibitor 2A | 0.024 | ||
| Hist1h1t | histone cluster 1, H1t | 0.024 | ||
| Mks1 | Meckel syndrome, type 1 | 0.023 | ||
| Gdf5 | growth differentiation factor 5 | 0.022 | ||
| Dnahc5 | dynein, axonemal, heavy chain 5 | 0.022 | ||
| Fgf15 | fibroblast growth factor 15 | 0.021 | ||
| Dicer1 | Dicer1, Dcr-1 homolog (Drosophila) | 0.021 | ||
| Dppa3 | developmental pluripotency-associated 3 | 0.021 | ||
| Bmp15 | bone morphogenetic protein 15 | 0.021 | ||
| Tbx3 | T-box 3 | 0.020 | ||
| Pdgfrb | platelet derived growth factor receptor, beta polypeptide | 0.020 | ||
| Diablo | diablo homolog (Drosophila) | 0.020 | ||
| Btbd3 | BTB (POZ) domain containing 3 | 0.020 | ||
| Cdh5 | cadherin 5 | 0.020 | ||
| Ntf3 | neurotrophin 3 | 0.019 | ||
| Foxd3 | forkhead box D3 | 0.019 | ||
| Mmp14 | matrix metallopeptidase 14 (membrane-inserted) | 0.019 | ||
| Htr4 | 5 hydroxytryptamine (serotonin) receptor 4 | 0.018 | ||
| Lrp2 | low density lipoprotein receptor-related protein 2 | 0.018 | ||
| Hey2 | hairy/enhancer-of-split related with YRPW motif 2 | 0.018 | ||
| Fzd4 | frizzled homolog 4 (Drosophila) | 0.018 | ||
| Rdh10 | retinol dehydrogenase 10 (all-trans) | 0.018 | ||
| Fzd1 | frizzled homolog 1 (Drosophila) | 0.018 | ||
| Kif1b | kinesin family member 1B | 0.018 | ||
| Dab2ip | disabled homolog 2 (Drosophila) interacting protein | 0.018 | ||
| Esr2 | estrogen receptor 2 (beta) | 0.018 | ||
| Ids | iduronate 2-sulfatase | 0.018 | ||
| Gdf9 | growth differentiation factor 9 | 0.018 | ||
| Rasal3 | RAS protein activator like 3 | 0.018 | ||
| Hoxb3 | homeobox B3 | 0.017 | ||
| Ifnb1 | interferon beta 1, fibroblast | 0.017 | ||
| Fmn1 | formin 1 | 0.017 | ||
| Atp7a | ATPase, Cu++ transporting, alpha polypeptide | 0.017 | ||
| Prx | periaxin | 0.017 | ||
| Vcl | vinculin | 0.017 | ||
| Dhh | desert hedgehog | 0.017 | ||
| Abpa | androgen binding protein alpha | 0.017 | ||
| Tcof1 | Treacher Collins Franceschetti syndrome 1, homolog | 0.017 | ||
| Ednrb | endothelin receptor type B | 0.017 | ||
| Pdgfb | platelet derived growth factor, B polypeptide | 0.016 | ||
| Gsk3b | glycogen synthase kinase 3 beta | 0.016 | ||
| Maf | avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog | 0.016 | ||
| Pik3r1 | phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) | 0.016 | ||
| Trp63 | transformation related protein 63 | 0.016 | ||
| Cyp19a1 | cytochrome P450, family 19, subfamily a, polypeptide 1 | 0.015 | ||
| Uox | urate oxidase | 0.015 | ||
| Tcl1 | T-cell lymphoma breakpoint 1 | 0.015 | ||
| Fndc7 | fibronectin type III domain containing 7 | 0.015 | ||
| Prdm1 | PR domain containing 1, with ZNF domain | 0.015 | ||
| Smtn | smoothelin | 0.015 | ||
| Acvr2b | activin receptor IIB | 0.015 | ||
| Pik3c2a | phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide | 0.015 | ||
| Eda | ectodysplasin-A | 0.015 | ||
| Col4a4 | collagen, type IV, alpha 4 | 0.015 | ||
| Tcf21 | transcription factor 21 | 0.015 | ||
| Cdca3 | cell division cycle associated 3 | 0.015 | ||
| Mcpt1 | mast cell protease 1 | 0.014 | ||
| Aff2 | AF4/FMR2 family, member 2 | 0.014 | ||
| Wnt4 | wingless-related MMTV integration site 4 | 0.014 | ||
| Npr3 | natriuretic peptide receptor 3 | 0.014 | ||
| Plxna1 | plexin A1 | 0.014 | ||
| Foxa2 | forkhead box A2 | 0.014 | ||
| Sh3pxd2a | SH3 and PX domains 2A | 0.013 | ||
| Capn1 | calpain 1 | 0.013 | ||
| Col2a1 | collagen, type II, alpha 1 | 0.013 | ||
| Acvr2a | activin receptor IIA | 0.013 | ||
| Lmx1b | LIM homeobox transcription factor 1 beta | 0.013 | ||
| Foxf2 | forkhead box F2 | 0.013 | ||
| Dkk1 | dickkopf homolog 1 (Xenopus laevis) | 0.012 | ||
| Hoxd3 | homeobox D3 | 0.012 | ||
| Miox | myo-inositol oxygenase | 0.012 | ||
| Pdcd1 | programmed cell death 1 | 0.012 | ||
| Fgr | Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog | 0.012 | ||
| Cuedc1 | CUE domain containing 1 | 0.012 | ||
| Mmp15 | matrix metallopeptidase 15 | 0.012 | ||
| Gab2 | growth factor receptor bound protein 2-associated protein 2 | 0.012 | ||
| P2rx7 | purinergic receptor P2X, ligand-gated ion channel, 7 | 0.012 | ||
| Ldb1 | LIM domain binding 1 | 0.012 | ||
| Neo1 | neogenin | 0.012 | ||
| Pld2 | phospholipase D2 | 0.012 | ||
| Casq2 | calsequestrin 2 | 0.012 | ||
| Itga3 | integrin alpha 3 | 0.012 | ||
| Ift88 | intraflagellar transport 88 homolog (Chlamydomonas) | 0.012 | ||
| Wnt6 | wingless-related MMTV integration site 6 | 0.011 | ||
| St3gal2 | ST3 beta-galactoside alpha-2,3-sialyltransferase 2 | 0.011 | ||
| Erbb4 | v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) | 0.011 | ||
| Lhx1 | LIM homeobox protein 1 | 0.011 | ||
| Cxadr | coxsackie virus and adenovirus receptor | 0.011 | ||
| Emp2 | epithelial membrane protein 2 | 0.011 | ||
| Cd46 | CD46 antigen, complement regulatory protein | 0.011 | ||
| Zfp57 | zinc finger protein 57 | 0.011 | ||
| Ctnnal1 | catenin (cadherin associated protein), alpha-like 1 | 0.011 | ||
| Pdha2 | pyruvate dehydrogenase E1 alpha 2 | 0.011 | ||
| Aplnr | apelin receptor | 0.011 | ||
| Nrp1 | neuropilin 1 | 0.011 | ||
| Stk3 | serine/threonine kinase 3 (Ste20, yeast homolog) | 0.011 | ||
| Myod1 | myogenic differentiation 1 | 0.011 | ||
| Angpt1 | angiopoietin 1 | 0.011 | ||
| Socs5 | suppressor of cytokine signaling 5 | 0.011 | ||
| Fgf5 | fibroblast growth factor 5 | 0.011 | ||
| Gcnt2 | glucosaminyl (N-acetyl) transferase 2, I-branching enzyme | 0.011 | ||
| Defb11 | defensin beta 11 | 0.011 | ||
| Per3 | period homolog 3 (Drosophila) | 0.011 | ||
| Art1 | ADP-ribosyltransferase 1 | 0.011 | ||
| Ppef2 | protein phosphatase, EF hand calcium-binding domain 2 | 0.011 | ||
| Dlg1 | discs, large homolog 1 (Drosophila) | 0.011 | ||
| Ptprg | protein tyrosine phosphatase, receptor type, G | 0.011 | ||
| Megf8 | multiple EGF-like-domains 8 | 0.010 | ||
| Efnb2 | ephrin B2 | 0.010 | ||
| Slc6a2 | solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2 | 0.010 | ||
| Adam17 | a disintegrin and metallopeptidase domain 17 | 0.010 | ||
| Lgals7 | lectin, galactose binding, soluble 7 | 0.010 | ||
| Cfc1 | cripto, FRL-1, cryptic family 1 | 0.010 |