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Rattus norvegicus

33 genes annotated in rat

skeletal muscle organ development

The progression of a skeletal muscle organ over time from its initial formation to its mature state. A skeletal muscle organ includes the skeletal muscle tissue and its associated connective tissue.

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Known genes in the process in rat Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "skeletal muscle organ development"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "skeletal muscle organ development" (in gray)

Name	Description	Probability	Func Analog Organism
Acta2	smooth muscle alpha-actin	0.103
Egr1	early growth response 1	0.086	Mouse
Egr2	early growth response 2	0.084	Mouse
Myh1	myosin, heavy polypeptide 1, skeletal muscle, adult	0.075
Casq1	calsequestrin 1 (fast-twitch, skeletal muscle)	0.073
Lgals3	lectin, galactoside-binding, soluble, 3	0.065
Dchs1	dachsous 1 (Drosophila)	0.061
Junb	jun B proto-oncogene	0.059
Prrx1	paired related homeobox 1	0.056
Actc1	actin, alpha, cardiac muscle 1	0.048
Anxa2	annexin A2	0.048
Kcnj8	potassium inwardly-rectifying channel, subfamily J, member 8	0.045
Fgf7	fibroblast growth factor 7	0.044
Myh3	myosin, heavy chain 3, skeletal muscle, embryonic	0.040	Mouse
Ogn	osteoglycin	0.039
Fgfr2	fibroblast growth factor receptor 2	0.039
Tnnt3	troponin T type 3 (skeletal, fast)	0.038
Tgfbr2	transforming growth factor, beta receptor II	0.037	Rat
Des	desmin	0.033	Zebrafish
Snip	SNAP25-interacting protein	0.032
Mfap4	microfibrillar-associated protein 4	0.032
Runx1	runt-related transcription factor 1	0.031
S100a10	S100 calcium binding protein A10	0.030	Rat
Col12a1	collagen, type XII, alpha 1	0.030
Col10a1	collagen, type X, alpha 1	0.029
S100a6	S100 calcium binding protein A6	0.029	Rat
Timp1	TIMP metallopeptidase inhibitor 1	0.029
Mybpc2	myosin binding protein C, fast-type	0.029
Bst1	bone marrow stromal cell antigen 1	0.028
Nr4a2	nuclear receptor subfamily 4, group A, member 2	0.028
Mrgprf	MAS-related GPR, member F	0.027
Ankrd1	ankyrin repeat domain 1 (cardiac muscle)	0.027	Mouse
Calcrl	calcitonin receptor-like	0.027	Rat
Ptma	prothymosin alpha	0.027
Col15a1	collagen, type XV, alpha 1	0.027
Serpine1	serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	0.027
Pla1a	phospholipase A1 member A	0.027
Ets1	v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.026
Gabra3	gamma-aminobutyric acid (GABA) A receptor, alpha 3	0.026
Myf6	myogenic factor 6	0.026	Zebrafish Mouse Fly
Fos	FBJ osteosarcoma oncogene	0.025	Mouse
Vwf	von Willebrand factor	0.025
Myl1	myosin, light chain 1	0.025	Rat
Purb	purine rich element binding protein B	0.025
Odf4	outer dense fiber of sperm tails 4	0.025
Irs1	insulin receptor substrate 1	0.025
Chrna1	cholinergic receptor, nicotinic, alpha 1 (muscle)	0.025	Human
Pou2f2	POU class 2 homeobox 2	0.024
Rara	retinoic acid receptor, alpha	0.024
Fxyd5	FXYD domain-containing ion transport regulator 5	0.024
Loxl1	lysyl oxidase-like 1	0.023
LOC100360986	mCG1035404-like	0.023
Aspn	asporin	0.023	Rat
Csrnp2	cysteine-serine-rich nuclear protein 2	0.023
Cd4	Cd4 molecule	0.023
Col8a1	collagen, type VIII, alpha 1	0.023
Psgb1	pregnancy-specific beta 1-glycoprotein	0.023
Mybph	myosin binding protein H	0.022
Myh8	myosin, heavy chain 8, skeletal muscle, perinatal	0.022
Mylk2	myosin light chain kinase 2	0.022
Fgr	Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	0.022
Ampd1	adenosine monophosphate deaminase 1 (isoform M)	0.022
Dag1	dystroglycan 1 (dystrophin-associated glycoprotein 1)	0.022
Ckm	creatine kinase, muscle	0.022
Has2	hyaluronan synthase 2	0.022
Klk1l	kallikrein 1-like peptidase	0.021
Gpr6	G protein-coupled receptor 6	0.021
Ntrk1	neurotrophic tyrosine kinase, receptor, type 1	0.021
Capn6	calpain 6	0.021
Myo9a	myosin IXA	0.021
Mr1	major histocompatibility complex, class I-related	0.020
Pecam1	platelet/endothelial cell adhesion molecule 1	0.020
Testin	testin gene	0.020
Mybpc1	myosin binding protein C, slow type	0.020
Nr2f2	nuclear receptor subfamily 2, group F, member 2	0.020	Mouse Rat
Csnk1g2	casein kinase 1, gamma 2	0.020
Slc18a2	solute carrier family 18 (vesicular monoamine), member 2	0.020
Haao	3-hydroxyanthranilate 3,4-dioxygenase	0.019
Ptafr	platelet-activating factor receptor	0.019
F13a1	coagulation factor XIII, A1 polypeptide	0.019
Gpr176	G protein-coupled receptor 176	0.019
Calcr	calcitonin receptor	0.019	Rat
Flt1	FMS-related tyrosine kinase 1	0.019	Rat
Slc10a1	solute carrier family 10 (sodium/bile acid cotransporter family), member 1	0.019
Hspb2	heat shock protein beta 2	0.019
Prkcdbp	protein kinase C, delta binding protein	0.019
Btc	betacellulin	0.019
Podxl	podocalyxin-like	0.019
Anxa5	annexin A5	0.019
Dcn	decorin	0.019
Lrp1	low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor)	0.019
Slco2a1	solute carrier organic anion transporter family, member 2a1	0.019
Btg2	BTG family, member 2	0.018
Plaur	plasminogen activator, urokinase receptor	0.018
Hand2	heart and neural crest derivatives expressed 2	0.018
Lig3	ligase III, DNA, ATP-dependent	0.018
Galr2	galanin receptor 2	0.018
Gdf10	growth differentiation factor 10	0.018
Atp2b4	ATPase, Ca++ transporting, plasma membrane 4	0.018
Slco2b1	solute carrier organic anion transporter family, member 2b1	0.018
Myog	myogenin	0.018	Zebrafish Mouse Fly
Ccl4	chemokine (C-C motif) ligand 4	0.018
Myh7	myosin, heavy chain 7, cardiac muscle, beta	0.018
Sirpa	signal-regulatory protein alpha	0.018
Tgfbr3	transforming growth factor, beta receptor III	0.018
Dcc	deleted in colorectal carcinoma	0.018
Slco6b1	solute carrier organic anion transporter family, member 6b1	0.017
Kremen1	kringle containing transmembrane protein 1	0.017
Gfra2	GDNF family receptor alpha 2	0.017
Adora2a	adenosine A2a receptor	0.017
Gjb4	gap junction protein, beta 4	0.017
Spt1	salivary protein 1	0.017
Entpd1	ectonucleoside triphosphate diphosphohydrolase 1	0.017
Ltbp2	latent transforming growth factor beta binding protein 2	0.017
PVR	poliovirus receptor	0.017
Tbx19	T-box 19	0.017
Actn2	actinin alpha 2	0.017
Cyr61	cysteine-rich, angiogenic inducer, 61	0.017
Igfbp5	insulin-like growth factor binding protein 5	0.017
Ncr1	natural cytotoxicity triggering receptor 1	0.017
Mia	melanoma inhibitory activity	0.017
Pou6f1	POU class 6 homeobox 1	0.017
Lamc1	laminin, gamma 1	0.017
Np4	defensin NP-4 precursor	0.017
Hrh2	histamine receptor H 2	0.017	Rat
Il17b	interleukin 17B	0.017
Olfml2b	olfactomedin-like 2B	0.017
Obscn	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	0.017
Nfya	nuclear transcription factor-Y alpha	0.016
Lum	lumican	0.016	Rat
Cabin1	calcineurin binding protein 1	0.016
Ier2	immediate early response 2	0.016
Ebf1	early B-cell factor 1	0.016
Ednra	endothelin receptor type A	0.016
St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	0.016
Igfals	insulin-like growth factor binding protein, acid labile subunit	0.016
Creb1	cAMP responsive element binding protein 1	0.016
Col4a1	collagen, type IV, alpha 1	0.016	Fly
Pdgfb	platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog)	0.016
Asph	aspartate-beta-hydroxylase	0.016
Pcsk5	proprotein convertase subtilisin/kexin type 5	0.016
Max	MYC associated factor X	0.016
Epha8	Eph receptor A8	0.016
Anpep	alanyl (membrane) aminopeptidase	0.016
Ccl2	chemokine (C-C motif) ligand 2	0.016
Itpr2	inositol 1,4,5-triphosphate receptor, type 2	0.015
Meox2	mesenchyme homeobox 2	0.015	Mouse
Folh1	folate hydrolase 1	0.015
Itga6	integrin, alpha 6	0.015	Rat
Chrnb1	cholinergic receptor, nicotinic, beta 1 (muscle)	0.015
Mgp	matrix Gla protein	0.015
Gna15	guanine nucleotide binding protein, alpha 15	0.015
Smpx	small muscle protein, X-linked	0.015
Capn9	calpain 9	0.015
Atp2a1	ATPase, Ca++ transporting, cardiac muscle, fast twitch 1	0.015
Tnnc2	troponin C type 2 (fast)	0.015
Adrbk2	adrenergic, beta, receptor kinase 2	0.015
Gng10	guanine nucleotide binding protein (G protein), gamma 10	0.015
Foxd3	forkhead box D3	0.015
Cd151	CD151 molecule (Raph blood group)	0.015
Slc29a2	solute carrier family 29 (nucleoside transporters), member 2	0.015
Ddr2	discoidin domain receptor tyrosine kinase 2	0.015
Fgf2	fibroblast growth factor 2	0.015
Cacng1	calcium channel, voltage-dependent, gamma subunit 1	0.015
Col9a1	collagen, type IX, alpha 1	0.015
Sardh	sarcosine dehydrogenase	0.015
Mmp9	matrix metallopeptidase 9	0.015
Agtr1a	angiotensin II receptor, type 1a	0.014
Mylpf	myosin light chain, phosphorylatable, fast skeletal muscle	0.014
Chrng	cholinergic receptor, nicotinic, gamma	0.014
LOC64038	sertolin	0.014
Gpr88	G-protein coupled receptor 88	0.014
Vim	vimentin	0.014
Lama5	laminin, alpha 5	0.014
Bdkrb2	bradykinin receptor B2	0.014
Dock8	dedicator of cytokinesis 8	0.014
Bmpr1a	bone morphogenetic protein receptor, type IA	0.014	Rat
Tubb3	tubulin, beta 3	0.014
Npy1r	neuropeptide Y receptor Y1	0.014
Vipr2	vasoactive intestinal peptide receptor 2	0.014	Rat
Zp2	zona pellucida glycoprotein 2 (sperm receptor)	0.014
Ifrd1	interferon-related developmental regulator 1	0.014
Col5a2	collagen, type V, alpha 2	0.014
Sh3bgrl3	SH3 domain binding glutamic acid-rich protein-like 3	0.014
Pate4	prostate and testis expressed 4	0.014
Cacna1s	calcium channel, voltage-dependent, L type, alpha 1S subunit	0.014
Gja4	gap junction protein, alpha 4	0.014
Slit3	slit homolog 3 (Drosophila)	0.014
Cdc2l5	cell division cycle 2-like 5 (cholinesterase-related cell division controller)	0.014
Nos2	nitric oxide synthase 2, inducible	0.014
Tnfrsf12a	tumor necrosis factor receptor superfamily, member 12a	0.014
Gpc3	glypican 3	0.014
Mak	male germ cell-associated kinase	0.014
Ctsj	cathepsin J	0.014
Ugt2a1	UDP glucuronosyltransferase 2 family, polypeptide A1	0.014
Atf3	activating transcription factor 3	0.014	Mouse
Opn1sw	opsin 1 (cone pigments), short-wave-sensitive	0.014
Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	0.013
Muc3a	mucin 3A, cell surface associated	0.013
Pik3ip1	phosphoinositide-3-kinase interacting protein 1	0.013
Lphn2	latrophilin 2	0.013
Elovl5	ELOVL family member 5, elongation of long chain fatty acids (yeast)	0.013
Il1b	interleukin 1 beta	0.013
Smoc2	SPARC related modular calcium binding 2	0.013
Snai1	snail homolog 1 (Drosophila)	0.013
Aldh3a1	aldehyde dehydrogenase 3 family, member A1	0.013
Col5a3	collagen, type V, alpha 3	0.013
Phka1	phosphorylase kinase, alpha 1	0.013
C7	complement component 7	0.013
Edn1	endothelin 1	0.013
Nes	nestin	0.013
Slc2a4	solute carrier family 2 (facilitated glucose transporter), member 4	0.013
Fam176b	family with sequence similarity 176, member B	0.013
Nos3	nitric oxide synthase 3, endothelial cell	0.013
Grin3a	glutamate receptor, ionotropic, N-methyl-D-aspartate 3A	0.013
Phkg1	phosphorylase kinase, gamma 1	0.013
Aspg	asparaginase homolog (S. cerevisiae)	0.013
Erbb4	v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	0.013	Rat
LOC686432	hypothetical protein LOC686432	0.013
Chdh	choline dehydrogenase	0.013
Tpm1	tropomyosin 1, alpha	0.013
Chrnb2	cholinergic receptor, nicotinic, beta 2 (neuronal)	0.013
Trim47	tripartite motif-containing 47	0.013
Nr4a3	nuclear receptor subfamily 4, group A, member 3	0.013
Kcnj13	potassium inwardly-rectifying channel, subfamily J, member 13	0.013
Dspp	dentin sialophosphoprotein	0.013
Epn2	epsin 2	0.013
Add3	adducin 3 (gamma)	0.013
Reg3a	regenerating islet-derived 3 alpha	0.013
Chrne	cholinergic receptor, nicotinic, epsilon	0.012
Ahr	aryl hydrocarbon receptor	0.012
Sncg	synuclein, gamma (breast cancer-specific protein 1)	0.012
Cryab	crystallin, alpha B	0.012
Lama2	laminin, alpha 2	0.012
Myh9	myosin, heavy chain 9, non-muscle	0.012
Adra2c	adrenergic, alpha-2C-, receptor	0.012	Rat
Syngr1	synaptogyrin 1	0.012
Cxcl13	chemokine (C-X-C motif) ligand 13	0.012
Col1a1	collagen, type I, alpha 1	0.012
Syt8	synaptotagmin VIII	0.012
Cfp	complement factor properdin	0.012
Clec4f	C-type lectin domain family 4, member f	0.012
Kcnq2	potassium voltage-gated channel, KQT-like subfamily, member 2	0.012
Mos	Moloney sarcoma oncogene	0.012
Hoxc4	homeo box C4	0.012
Hbegf	heparin-binding EGF-like growth factor	0.012
Hck	hemopoietic cell kinase	0.012
Utrn	utrophin	0.012
RGD1564327	similar to integrin alpha 8	0.012	Rat
Tfec	transcription factor EC	0.012
Chrna7	cholinergic receptor, nicotinic, alpha 7	0.012
Csrp3	cysteine and glycine-rich protein 3	0.012
Chst3	carbohydrate (chondroitin 6) sulfotransferase 3	0.012
Dusp6	dual specificity phosphatase 6	0.012
Plod2	procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	0.012
Klrb1a	killer cell lectin-like receptor subfamily B, member 1A	0.012
Zfp382	zinc finger protein 382	0.012
Ephb3	Eph receptor B3	0.012
Neurl2	neuralized homolog 2 (Drosophila)	0.012	Rat
Cdh5	cadherin 5	0.012
Lasp1	LIM and SH3 protein 1	0.012
Boc	biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	0.012
Odf1	outer dense fiber of sperm tails 1	0.012
Il10ra	interleukin 10 receptor, alpha	0.012
Plxdc2	plexin domain containing 2	0.012
Olr1867	olfactory receptor 1867	0.012
Krtap1-5	keratin associated protein 1-5	0.012
Slc25a10	solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10	0.012
Fzd2	frizzled homolog 2 (Drosophila)	0.012
Sparc	secreted protein, acidic, cysteine-rich (osteonectin)	0.012
Clic4	chloride intracellular channel 4	0.012
Sod3	superoxide dismutase 3, extracellular	0.012
Olr1271	olfactory receptor 1271	0.012
Fbln5	fibulin 5	0.012
RGD1565927	similar to 4631422O05Rik protein	0.012
Mertk	c-mer proto-oncogene tyrosine kinase	0.012
Unc5b	unc-5 homolog B (C. elegans)	0.012
Ttn	titin	0.012
Pld1	phospholipase D1	0.011
Spn	sialophorin	0.011
Stxbp2	syntaxin binding protein 2	0.011
Gpx3	glutathione peroxidase 3	0.011
Sparcl1	SPARC-like 1 (hevin)	0.011
Slc6a3	solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	0.011
Slc22a2	solute carrier family 22 (organic cation transporter), member 2	0.011
Htr7	5-hydroxytryptamine (serotonin) receptor 7	0.011
Tnfrsf4	tumor necrosis factor receptor superfamily, member 4	0.011
Sox4	SRY (sex determining region Y)-box 4	0.011
Ncan	neurocan	0.011
Tnni2	troponin I type 2 (skeletal, fast)	0.011
Tas2r107	taste receptor, type 2, member 107	0.011
Pde4c	phosphodiesterase 4C, cAMP-specific (phosphodiesterase E1 dunce homolog, Drosophila)	0.011
Syt9	synaptotagmin IX	0.011
Csf1	colony stimulating factor 1 (macrophage)	0.011
Smad6	SMAD family member 6	0.011
Gcm1	glial cells missing homolog 1 (Drosophila)	0.011
Arf6	ADP-ribosylation factor 6	0.011
Cd52	CD52 antigen	0.011
Itgbl1	integrin, beta-like 1	0.011
Itpkb	inositol 1,4,5-trisphosphate 3-kinase B	0.011
Tcfe2a	transcription factor E2a	0.011
Pdk4	pyruvate dehydrogenase kinase, isozyme 4	0.011
Ttc3	tetratricopeptide repeat domain 3	0.011
Eln	elastin	0.011
Ms4a2	membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	0.011
Gpr1	G protein-coupled receptor 1	0.011
Gper	G protein-coupled estrogen receptor 1	0.011
Ptpn3	protein tyrosine phosphatase, non-receptor type 3	0.011
Atp7a	ATPase, Cu++ transporting, alpha polypeptide	0.011
Hspb7	heat shock protein family, member 7 (cardiovascular)	0.011
Nfic	nuclear factor I/C	0.011
Plekhg2	pleckstrin homology domain containing, family G (with RhoGef domain) member 2	0.011
Tgfb1i1	transforming growth factor beta 1 induced transcript 1	0.011
Oxtr	oxytocin receptor	0.011
LOC100360587	hypothetical protein LOC100360587	0.011
Comp	cartilage oligomeric matrix protein	0.011
Foxs1	forkhead box S1	0.011
Pf4	platelet factor 4	0.011
Pip4k2b	phosphatidylinositol-5-phosphate 4-kinase, type II, beta	0.011
Cdh17	cadherin 17	0.011
Prg2	proteoglycan 2, bone marrow	0.011
Gnat3	guanine nucleotide binding protein, alpha transducing 3	0.011
Musk	muscle, skeletal, receptor tyrosine kinase	0.011
Pthlh	parathyroid hormone-like hormone	0.011
Prlhr	prolactin releasing hormone receptor	0.011
Hcrt	hypocretin	0.011
Tp53	tumor protein p53	0.011
Ar	androgen receptor	0.011
Mmp2	matrix metallopeptidase 2	0.011
Idi1	isopentenyl-diphosphate delta isomerase 1	0.011
Prm3	protamine 3	0.011
Tnnt2	troponin T type 2 (cardiac)	0.011
Galr3	galanin receptor 3	0.011
Kcnj5	potassium inwardly-rectifying channel, subfamily J, member 5	0.011
Id1	inhibitor of DNA binding 1	0.011
Mbp	myelin basic protein	0.011
Scn7a	sodium channel, voltage-gated, type VII, alpha	0.011
Dpysl3	dihydropyrimidinase-like 3	0.011
Hmox1	heme oxygenase (decycling) 1	0.011
Myh11	myosin, heavy chain 11, smooth muscle	0.011
Ptgs2	prostaglandin-endoperoxide synthase 2	0.011
Fgfr4	fibroblast growth factor receptor 4	0.010
Apoc4	apolipoprotein C-IV	0.010
Cxcl6	chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)	0.010
Smad3	SMAD family member 3	0.010
Il6r	interleukin 6 receptor	0.010
Selt	selenoprotein T	0.010
Ctgf	connective tissue growth factor	0.010
Krt5	keratin 5	0.010
Atp7b	ATPase, Cu++ transporting, beta polypeptide	0.010
Inpp4b	inositol polyphosphate-4-phosphatase, type II	0.010
Tie1	tyrosine kinase with immunoglobulin-like and EGF-like domains 1	0.010
Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.010
Gabrg3	gamma-aminobutyric acid (GABA) A receptor, gamma 3	0.010
Fn1	fibronectin 1	0.010
Numbl	numb homolog (Drosophila)-like	0.010
Fn3k	fructosamine 3 kinase	0.010
Rup2	urinary protein 2	0.010
Hoxa2	homeo box A2	0.010
Neb	nebulin	0.010
LOC56764	dnaj-like protein	0.010
Homer3	homer homolog 3 (Drosophila)	0.010
Sypl2	synaptophysin-like 2	0.010
Lrrc15	leucine rich repeat containing 15	0.010
Hnf1a	HNF1 homeobox A	0.010
Mapk4	mitogen-activated protein kinase 4	0.010
Gcg	glucagon	0.010
Mpz	myelin protein zero	0.010
Ceacam9	carcinoembryonic antigen-related cell adhesion molecule 9	0.010
Smad7	SMAD family member 7	0.010
Slc44a2	solute carrier family 44, member 2	0.010
Tbx2	T-box 2	0.010
Npr1	natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)	0.010
Cnga2	cyclic nucleotide gated channel alpha 2	0.010
Col3a1	collagen, type III, alpha 1	0.010
Hic2	hypermethylated in cancer 2	0.010
Hmha1	histocompatibility (minor) HA-1	0.010
Lep	leptin	0.010
Pex5l	peroxisomal biogenesis factor 5-like	0.010
Sub1	SUB1 homolog (S. cerevisiae)	0.010
Gata4	GATA binding protein 4	0.010
Pde5a	phosphodiesterase 5A, cGMP-specific	0.010
Scn5a	sodium channel, voltage-gated, type V, alpha subunit	0.010
Slc14a1	solute carrier family 14 (urea transporter), member 1	0.010