IMP

Process View

Rattus norvegicus

3 genes annotated in rat

rna catabolic process

The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.

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Known genes in the process in rat Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "rna catabolic process"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "rna catabolic process" (in gray)

Name	Description	Probability	Func Analog Organism
Fos	FBJ osteosarcoma oncogene	0.194
Ppp1r15a	protein phosphatase 1, regulatory (inhibitor) subunit 15A	0.056
Junb	jun B proto-oncogene	0.049
Nsfl1c	NSFL1 (p97) cofactor (p47)	0.043
Dusp1	dual specificity phosphatase 1	0.030
Egr1	early growth response 1	0.029
Rnps1	ribonucleic acid binding protein S1	0.027	Human
Cct7	chaperonin containing Tcp1, subunit 7 (eta)	0.024
Cct3	chaperonin containing Tcp1, subunit 3 (gamma)	0.024
Eef2	eukaryotic translation elongation factor 2	0.023
Hist1h1a	histone cluster 1, H1a	0.022
Nr4a1	nuclear receptor subfamily 4, group A, member 1	0.022
Ruvbl1	RuvB-like 1 (E. coli)	0.022
Btg2	BTG family, member 2	0.021	Human
Mtch2	mitochondrial carrier homolog 2 (C. elegans)	0.021
Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	0.020
Zfp36	zinc finger protein 36	0.019	Human
Smu1	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	0.019
Pin1	peptidylprolyl cis/trans isomerase, NIMA-interacting 1	0.019
Hsp90ab1	heat shock protein 90 alpha (cytosolic), class B member 1	0.019
Psmc1	proteasome (prosome, macropain) 26S subunit, ATPase, 1	0.018
Atp1a1	ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.018
Ier2	immediate early response 2	0.018
Papola	poly (A) polymerase alpha	0.018
Psmc4	proteasome (prosome, macropain) 26S subunit, ATPase, 4	0.018
Cct4	chaperonin containing Tcp1, subunit 4 (delta)	0.017
Snrpe	small nuclear ribonucleoprotein polypeptide E	0.017
Psmd2	proteasome (prosome, macropain) 26S subunit, non-ATPase, 2	0.017
Plrg1	pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	0.017
Nap1l4	nucleosome assembly protein 1-like 4	0.016
Eif4e	eukaryotic translation initiation factor 4E	0.016
Rbmxrtl	RNA binding motif protein, X chromosome retrogene-like	0.016
Sec61a1	Sec61 alpha 1 subunit (S. cerevisiae)	0.016
Mafk	v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)	0.016
Ywhaz	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	0.016
Helz	helicase with zinc finger	0.016
Cyfip2	cytoplasmic FMR1 interacting protein 2	0.015
Cops7a	COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)	0.015
Tardbp	TAR DNA binding protein	0.015
Sfrs2	splicing factor, arginine/serine-rich 2	0.015
Pip4k2a	phosphatidylinositol-5-phosphate 4-kinase, type II, alpha	0.015
Nup35	nucleoporin 35	0.015
Trim28	tripartite motif-containing 28	0.015
Nat5	N-acetyltransferase 5	0.014
Ccnd3	cyclin D3	0.014
Cmtm6	CKLF-like MARVEL transmembrane domain containing 6	0.014
Cebpb	CCAAT/enhancer binding protein (C/EBP), beta	0.014
Strap	serine/threonine kinase receptor associated protein	0.014
Errfi1	ERBB receptor feedback inhibitor 1	0.014
Csrnp1	cysteine-serine-rich nuclear protein 1	0.014
Jun	Jun oncogene	0.014
Nup85	nucleoporin 85	0.013
Mdfic	MyoD family inhibitor domain containing	0.013
Ubxn4	UBX domain protein 4	0.013
Ddx50	DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	0.013
Ptpro	protein tyrosine phosphatase, receptor type, O	0.013
Cct5	chaperonin containing Tcp1, subunit 5 (epsilon)	0.013
Cnot6	CCR4-NOT transcription complex, subunit 6	0.013	Human Fly
Wdfy3	WD repeat and FYVE domain containing 3	0.013
LOC687711	similar to small nuclear ribonucleoprotein D3	0.013
Tubgcp6	tubulin, gamma complex associated protein 6	0.013
Pmpcb	peptidase (mitochondrial processing) beta	0.013
Setd6	SET domain containing 6	0.013
Nfkb1	nuclear factor of kappa light polypeptide gene enhancer in B-cells 1	0.013
Usf2	upstream transcription factor 2, c-fos interacting	0.013
Mllt10	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	0.012
Cdc123	cell division cycle 123 homolog (S. cerevisiae)	0.012
Gtf2i	general transcription factor II I	0.012
Mark3	MAP/microtubule affinity-regulating kinase 3	0.012
Mxd1	max dimerization protein 1	0.012
Txnrd1	thioredoxin reductase 1	0.012
LOC682469	similar to jumonji domain containing 1B	0.012
Mllt1	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	0.012
Pds5a	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	0.012
Vcp	valosin-containing protein	0.012	Yeast
Ddx17	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	0.012
Usp19	ubiquitin specific peptidase 19	0.012
Dmap1	DNA methyltransferase 1-associated protein 1	0.012
Mrps31	mitochondrial ribosomal protein S31	0.011
Snd1	staphylococcal nuclease and tudor domain containing 1	0.011
Ss18	synovial sarcoma translocation, Chromosome 18	0.011
Dcaf15	DDB1 and CUL4 associated factor 15	0.011
Clpb	ClpB caseinolytic peptidase B homolog (E. coli)	0.011
Sf3a3	splicing factor 3a, subunit 3	0.011
Phlpp1	PH domain and leucine rich repeat protein phosphatase 1	0.011
Braf	v-raf murine sarcoma viral oncogene homolog B1	0.011
Lsm2	LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.011
Cept1	choline/ethanolamine phosphotransferase 1	0.011
Stat3	signal transducer and activator of transcription 3	0.011
Gnb2	guanine nucleotide binding protein (G protein), beta polypeptide 2	0.011
Prmt1	protein arginine methyltransferase 1	0.011
Gadd45g	growth arrest and DNA-damage-inducible, gamma	0.011
Tm9sf3	transmembrane 9 superfamily member 3	0.011
Dusp6	dual specificity phosphatase 6	0.011
Pim3	pim-3 oncogene	0.011
Snapc2	small nuclear RNA activating complex, polypeptide 2	0.011
Dnaja1	DnaJ (Hsp40) homolog, subfamily A, member 1	0.011
Vps37b	vacuolar protein sorting 37 homolog B (S. cerevisiae)	0.011
Csnk1g2	casein kinase 1, gamma 2	0.011
Ppp2r4	protein phosphatase 2A activator, regulatory subunit 4	0.011
Xpo7	exportin 7	0.011
Tnpo1	transportin 1	0.011
Epha2	Eph receptor A2	0.011
Eif4a3	eukaryotic translation initiation factor 4A, isoform 3	0.011
Ep400	E1A binding protein p400	0.010
Ahcyl1	adenosylhomocysteinase-like 1	0.010
Zfp36l2	zinc finger protein 36, C3H type-like 2	0.010
Fam104a	family with sequence similarity 104, member A	0.010
Tcfe2a	transcription factor E2a	0.010
Erh	enhancer of rudimentary homolog (Drosophila)	0.010
Gna12	guanine nucleotide binding protein (G protein) alpha 12	0.010
Cggbp1	CGG triplet repeat binding protein 1	0.010
Caprin1	cell cycle associated protein 1	0.010
Fmnl1	formin-like 1	0.010
Tubgcp2	tubulin, gamma complex associated protein 2	0.010
Sept11	septin 11	0.010
Bud31	BUD31 homolog (S. cerevisiae)	0.010
Nploc4	nuclear protein localization 4 homolog (S. cerevisiae)	0.010
Abcc10	ATP-binding cassette, subfamily C (CFTR/MRP), member 10	0.010
Depdc5	DEP domain containing 5	0.010
Gcn1l1	GCN1 general control of amino-acid synthesis 1-like 1 (yeast)	0.010
Bloc1s2	biogenesis of lysosomal organelles complex-1, subunit 2	0.010
Brd3	bromodomain containing 3	0.010
Oxnad1	oxidoreductase NAD-binding domain containing 1	0.010