IMP

Process View

Saccharomyces cerevisiae

29 genes annotated in yeast

protein modification by small protein removal

A protein modification process in which one or more covalently attached groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are removed from a target protein.

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Known genes in the process in yeast Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "protein modification by small protein removal"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "protein modification by small protein removal" (in gray)

Name	Description	Probability	Func Analog Organism
RRI1	Rri1p	0.665
RRI2	Rri2p	0.448
PCI8	Pci8p	0.443
CSI1	Csi1p	0.441
TAF12	Taf12p	0.329
SUS1	Sus1p	0.257
CSN9	Csn9p	0.227
TRA1	Tra1p	0.219	Human
DOA1	Doa1p	0.182
YOL087C	hypothetical protein	0.174
NPL4	Npl4p	0.164
NUP1	Nup1p	0.147
UBP8	Ubp8p	0.147
ADA2	Ada2p	0.115
NUP49	Nup49p	0.086
NGG1	Ngg1p	0.081
SGF29	Sgf29p	0.081
RPT2	Rpt2p	0.077
UBP2	Ubp2p	0.076
TAF5	Taf5p	0.068
NUP170	Nup170p	0.067
INN1	Inn1p	0.065
RPN5	Rpn5p	0.064
SKP1	Skp1p	0.060
YOS9	Yos9p	0.056
HDA2	Hda2p	0.055
SGF73	Sgf73p	0.050
SGF11	Sgf11p	0.049
SEM1	Sem1p	0.047
SPT3	Spt3p	0.045	Human
SAC3	Sac3p	0.043
ASM4	Asm4p	0.042
CMK1	Cmk1p	0.042
YLR419W	hypothetical protein	0.040
TAF6	Taf6p	0.040
YKU70	Yku70p	0.039
UBP6	Ubp6p	0.038
SPT20	Spt20p	0.037
HUA1	Hua1p	0.036
SPT8	Spt8p	0.036
PIP2	Pip2p	0.035
SPT5	Spt5p	0.033
CHZ1	Chz1p	0.032
NUP157	Nup157p	0.032
ART10	Art10p	0.031
UFD2	Ufd2p	0.030
YPR091C	hypothetical protein	0.030
GYL1	Gyl1p	0.030
BUL1	Bul1p	0.030
RPO31	Rpo31p	0.029
AIM3	Aim3p	0.028
GRR1	Grr1p	0.028
REG1	Reg1p	0.028
YJR084W	hypothetical protein	0.028
SAP190	Sap190p	0.027
NUP120	Nup120p	0.027
CRZ1	Crz1p	0.026
SGV1	Sgv1p	0.026
YRB2	Yrb2p	0.025
MUS81	Mus81p	0.025
SRD1	Srd1p	0.025
ARP10	Arp10p	0.025
RPN1	Rpn1p	0.025
YLR264C-A	hypothetical protein	0.024
RPN2	Rpn2p	0.024
NUP2	Nup2p	0.024
MAD3	Mad3p	0.023
DOS2	Dos2p	0.023
CAR1	Car1p	0.023
HSE1	Hse1p	0.023
CUP1-1	Cup1-1p	0.023
SWI1	Swi1p	0.023
RTR1	Rtr1p	0.022
STI1	Sti1p	0.022
CDC31	Cdc31p	0.022
UFO1	Ufo1p	0.022
KIN82	Kin82p	0.022
PCT1	Pct1p	0.022
YAR068W	hypothetical protein	0.022
YOL038C-A	hypothetical protein	0.022
VMR1	Vmr1p	0.022
LEU2	Leu2p	0.021
FAR8	Far8p	0.021
STE18	Ste18p	0.021
ECM27	Ecm27p	0.021
MDR1	Mdr1p	0.021
ZPS1	Zps1p	0.021
EAF1	Eaf1p	0.020
RAV2	Rav2p	0.020
HHT2	Hht2p	0.020
RAV1	Rav1p	0.020
UBR2	Ubr2p	0.020
ARE2	Are2p	0.020
TIP1	Tip1p	0.020
UBA4	Uba4p	0.020
MMS1	Mms1p	0.019
YLR162W	hypothetical protein	0.019
MER1	Mer1p	0.019
YCR007C	hypothetical protein	0.019
CRM1	Crm1p	0.019
MLP1	Mlp1p	0.019
THP3	Thp3p	0.019
RSN1	Rsn1p	0.019
YOR022C	hypothetical protein	0.018
YGK3	Ygk3p	0.018
YKR011C	hypothetical protein	0.018
YPL277C	hypothetical protein	0.018
NMA2	Nma2p	0.018
YAR066W	hypothetical protein	0.018
URA2	Ura2p	0.018
RAD61	Rad61p	0.018
AGE1	Age1p	0.018
AGC1	Agc1p	0.018
ARG8	Arg8p	0.018
TFG1	Tfg1p	0.018
SLX5	Slx5p	0.018
YOL098C	hypothetical protein	0.018
BSC1	Bsc1p	0.018
SPL2	Spl2p	0.017
YJL218W	hypothetical protein	0.017
SOV1	Sov1p	0.017
AQR1	Aqr1p	0.017
ATP6	Atp6p	0.017
RAT1	Rat1p	0.017
YBR013C	hypothetical protein	0.017
MON2	Mon2p	0.017
FMP27	Fmp27p	0.017
PBP1	Pbp1p	0.017
URA3	Ura3p	0.017
RPT1	Rpt1p	0.017
YBT1	Ybt1p	0.017
CUE2	Cue2p	0.017
HFI1	Hfi1p	0.017
YFR016C	hypothetical protein	0.017
NMT1	Nmt1p	0.017
MAK21	Mak21p	0.017
AUA1	Aua1p	0.017
YIL151C	hypothetical protein	0.017
UBP7	Ubp7p	0.017
YLR042C	hypothetical protein	0.017
SPS4	Sps4p	0.016
SPT7	Spt7p	0.016
KEM1	Kem1p	0.016
ARO10	Aro10p	0.016
HO	Hop	0.016
WSS1	Wss1p	0.016
YPR157W	hypothetical protein	0.016
PEX32	Pex32p	0.016
YIR035C	hypothetical protein	0.016
YJL181W	hypothetical protein	0.016
YKR075C	hypothetical protein	0.016
HXT3	Hxt3p	0.016
YGR042W	hypothetical protein	0.016
BLM10	Blm10p	0.016
NCE103	Nce103p	0.016
YNL155W	hypothetical protein	0.016
GDS1	Gds1p	0.016
HPF1	Hpf1p	0.016
ZRG8	Zrg8p	0.016
SPT16	Spt16p	0.016
MTR2	Mtr2p	0.016
OCA4	Oca4p	0.016
DEF1	Def1p	0.016
SRP72	Srp72p	0.016
ROD1	Rod1p	0.016
SPO12	Spo12p	0.016
GLN1	Gln1p	0.016
YCR015C	hypothetical protein	0.015
MF(ALPHA)2	Mf(alpha)2p	0.015
CTS1	Cts1p	0.015
CUP1-2	Cup1-2p	0.015
TSC3	Tsc3p	0.015
YKL105C	hypothetical protein	0.015
UBP9	Ubp9p	0.015	Human
FMT1	Fmt1p	0.015
TFC3	Tfc3p	0.015
YGL036W	hypothetical protein	0.015
YOL013W-A	hypothetical protein	0.015
PRS2	Prs2p	0.015
SLX8	Slx8p	0.015
RNP1	Rnp1p	0.015
CHA1	Cha1p	0.015
UBX3	Ubx3p	0.015
ACC1	Acc1p	0.015
RPN9	Rpn9p	0.015
CPD1	Cpd1p	0.015
YLR225C	hypothetical protein	0.015
DRE2	Dre2p	0.015
SFT1	Sft1p	0.015
TYE7	Tye7p	0.015
ENA5	Ena5p	0.015
DUR1,2	Dur1,2p	0.015
TFA1	Tfa1p	0.015
END3	End3p	0.015
YLR001C	hypothetical protein	0.015
YNL234W	hypothetical protein	0.015
DIC1	Dic1p	0.015
EPL1	Epl1p	0.015
HST3	Hst3p	0.015
IZH4	Izh4p	0.015
SKM1	Skm1p	0.015
YML003W	hypothetical protein	0.015
SMY2	Smy2p	0.015
SAN1	San1p	0.015
HUL5	Hul5p	0.015
YNL144C	hypothetical protein	0.014
UBP11	Ubp11p	0.014	Human Yeast Mouse Rat Fly
PRE10	Pre10p	0.014
ARP8	Arp8p	0.014
MFA1	Mfa1p	0.014
BNA4	Bna4p	0.014
YLR271W	hypothetical protein	0.014
HOR2	Hor2p	0.014
MFA2	Mfa2p	0.014
ICS2	Ics2p	0.014
YNL067W-B	hypothetical protein	0.014
YPR148C	hypothetical protein	0.014
CTR3	Ctr3p	0.014
RUP1	Rup1p	0.014
SCM4	Scm4p	0.014
REV1	Rev1p	0.014
RTT105	Rtt105p	0.014
YPL066W	hypothetical protein	0.014
YLR040C	hypothetical protein	0.014
SPO74	Spo74p	0.014
PUP2	Pup2p	0.014
VPS51	Vps51p	0.014
ATG20	Atg20p	0.014
OPT2	Opt2p	0.014
MSS116	Mss116p	0.014
DOA4	Doa4p	0.014	Human Yeast Mouse Rat Fly
SSL1	Ssl1p	0.014
SLI1	Sli1p	0.014
ESC1	Esc1p	0.014
YAL037C-A	hypothetical protein	0.014
ERT1	Ert1p	0.014
OSM1	Osm1p	0.014
BRN1	Brn1p	0.014
TAF4	Taf4p	0.014
PTR2	Ptr2p	0.014
YMR317W	hypothetical protein	0.014
YLR132C	hypothetical protein	0.014
YGL006W-A	hypothetical protein	0.013
DED1	Ded1p	0.013
ADH2	Adh2p	0.013
YOR365C	hypothetical protein	0.013
ECM30	Ecm30p	0.013
YPR096C	hypothetical protein	0.013
YCK3	Yck3p	0.013
YLL054C	hypothetical protein	0.013
COS12	Cos12p	0.013
YLR412C-A	hypothetical protein	0.013
MF(ALPHA)1	Mf(alpha)1p	0.013
BDS1	Bds1p	0.013
AQY2	Aqy2p	0.013
UPS3	Ups3p	0.013
YJL160C	hypothetical protein	0.013
ARO9	Aro9p	0.013
YJL070C	hypothetical protein	0.013
SUT1	Sut1p	0.013
YAL064W	hypothetical protein	0.013
RMD8	Rmd8p	0.013
CNA1	Cna1p	0.013
YJR120W	hypothetical protein	0.013
SAK1	Sak1p	0.013
RDS3	Rds3p	0.013
COS111	Cos111p	0.013
YCL021W-A	hypothetical protein	0.013
UBP13	Ubp13p	0.013	Human
TCM62	Tcm62p	0.013
ALT2	Alt2p	0.013
RRT5	Rrt5p	0.013
YPL168W	hypothetical protein	0.013
YPR078C	hypothetical protein	0.013
NPR2	Npr2p	0.013
DBP1	Dbp1p	0.013
ALY2	Aly2p	0.013
AAD6	Aad6p	0.013
SRT1	Srt1p	0.013
SEN54	Sen54p	0.013
YGL235W	hypothetical protein	0.013
APM1	Apm1p	0.013
VBA5	Vba5p	0.013
YEL057C	hypothetical protein	0.013
RPN6	Rpn6p	0.013
RPN14	Rpn14p	0.013
YDR034C-A	hypothetical protein	0.013
YER137C	hypothetical protein	0.013
KIC1	Kic1p	0.013
IDI1	Idi1p	0.013
ATO3	Ato3p	0.013
NUP192	Nup192p	0.013
SSP1	Ssp1p	0.013
YGR016W	hypothetical protein	0.013
PTC4	Ptc4p	0.013
YJR098C	hypothetical protein	0.013
ARR2	Arr2p	0.013
SNF3	Snf3p	0.013
ARK1	Ark1p	0.013
YBL029W	hypothetical protein	0.013
RAD5	Rad5p	0.012
YNL018C	hypothetical protein	0.012
AVL9	Avl9p	0.012
YLR407W	hypothetical protein	0.012
SHG1	Shg1p	0.012
SEO1	Seo1p	0.012
HYP2	Hyp2p	0.012
DCP2	Dcp2p	0.012
YPL191C	hypothetical protein	0.012
YGL108C	hypothetical protein	0.012
NRG2	Nrg2p	0.012
YPR027C	hypothetical protein	0.012
YNL033W	hypothetical protein	0.012
YLR278C	hypothetical protein	0.012
APM2	Apm2p	0.012
RAD23	Rad23p	0.012
FCY21	Fcy21p	0.012
YNL162W-A	hypothetical protein	0.012
BIO2	Bio2p	0.012
ACF4	Acf4p	0.012
MFB1	Mfb1p	0.012
CCT6	Cct6p	0.012
WSC4	Wsc4p	0.012
YGL015C	hypothetical protein	0.012
NOP10	Nop10p	0.012
YCR102C	hypothetical protein	0.012
APC11	Apc11p	0.012
GSH1	Gsh1p	0.012
MET6	Met6p	0.012
KNH1	Knh1p	0.012
FAA2	Faa2p	0.012
IMA1	Ima1p	0.012
PMA2	Pma2p	0.012
SAP1	Sap1p	0.012
YKR041W	hypothetical protein	0.012
YDR131C	hypothetical protein	0.012
FRE7	Fre7p	0.012
TAE2	Tae2p	0.012
GRX7	Grx7p	0.012
CRP1	Crp1p	0.012
ATR1	Atr1p	0.012
SET4	Set4p	0.012
HEM3	Hem3p	0.012
DCN1	Dcn1p	0.012
CAB2	Cab2p	0.012
AAD15	Aad15p	0.012
SRX1	Srx1p	0.012
KDX1	Kdx1p	0.012
YPL067C	hypothetical protein	0.012
MDN1	Mdn1p	0.012
YOR387C	hypothetical protein	0.012
YOL014W	hypothetical protein	0.012
ASE1	Ase1p	0.012
YML100W-A	hypothetical protein	0.012
MUM3	Mum3p	0.012
MTH1	Mth1p	0.012
SAE2	Sae2p	0.012
TIR3	Tir3p	0.012
YNR062C	hypothetical protein	0.012
YIL014C-A	hypothetical protein	0.012
YOR012W	hypothetical protein	0.012
LCL1	Lcl1p	0.012
BIT61	Bit61p	0.012
YDR222W	hypothetical protein	0.012
PUF2	Puf2p	0.012
YHR035W	hypothetical protein	0.012
OSH6	Osh6p	0.012
GYP5	Gyp5p	0.012
YAR029W	hypothetical protein	0.012
YBL044W	hypothetical protein	0.011
NUP145	Nup145p	0.011
YML053C	hypothetical protein	0.011
NUR1	Nur1p	0.011
YPL216W	hypothetical protein	0.011
YCL001W-B	hypothetical protein	0.011
SMX3	Smx3p	0.011
DAD4	Dad4p	0.011
BAT2	Bat2p	0.011
SWC7	Swc7p	0.011
PSP2	Psp2p	0.011
FCY22	Fcy22p	0.011
FPK1	Fpk1p	0.011
EDS1	Eds1p	0.011
MMP1	Mmp1p	0.011
DIF1	Dif1p	0.011
REE1	Ree1p	0.011
YLR363W-A	hypothetical protein	0.011
RSB1	Rsb1p	0.011
YDR524W-C	hypothetical protein	0.011
NOP16	Nop16p	0.011
BI4	Bi4p	0.011
FAR3	Far3p	0.011
GPD2	Gpd2p	0.011
YIR042C	hypothetical protein	0.011
YNL034W	hypothetical protein	0.011
PHM6	Phm6p	0.011
YHK8	Yhk8p	0.011
YOR316C-A	hypothetical protein	0.011
YDJ1	Ydj1p	0.011
YLR281C	hypothetical protein	0.011
OTU1	Otu1p	0.011
YEA4	Yea4p	0.011
YCH1	Ych1p	0.011
YNR063W	hypothetical protein	0.011
DOG1	Dog1p	0.011
YIL089W	hypothetical protein	0.011
PHO11	Pho11p	0.011
MAL13	Mal13p	0.011
SQS1	Sqs1p	0.011
UBC1	Ubc1p	0.011
SPO77	Spo77p	0.011
NAM2	Nam2p	0.011
PIG1	Pig1p	0.011
PCL2	Pcl2p	0.011
ZRT1	Zrt1p	0.011
KSH1	Ksh1p	0.011
VPS38	Vps38p	0.011
BIO4	Bio4p	0.011
YER064C	hypothetical protein	0.011
NAB6	Nab6p	0.011
MET8	Met8p	0.011
MAG2	Mag2p	0.011
EAR1	Ear1p	0.011
SPO19	Spo19p	0.011
KRE29	Kre29p	0.011
PHO12	Pho12p	0.011
APL3	Apl3p	0.011
ADY2	Ady2p	0.011
BIO5	Bio5p	0.011
YLR342W-A	hypothetical protein	0.011
CAB3	Cab3p	0.011
YEA6	Yea6p	0.011
YER130C	hypothetical protein	0.011
PRM4	Prm4p	0.011
YFR006W	hypothetical protein	0.011
YER175W-A	hypothetical protein	0.011
EXO70	Exo70p	0.011
LIF1	Lif1p	0.011
FRE4	Fre4p	0.011
YSR3	Ysr3p	0.011
VEL1	Vel1p	0.011
NTA1	Nta1p	0.011
PEX5	Pex5p	0.011
SRP68	Srp68p	0.011
RTS2	Rts2p	0.011
GMH1	Gmh1p	0.011
HMRA1	Hmra1p	0.011
HLJ1	Hlj1p	0.011
SIZ1	Siz1p	0.011
YDL085C-A	hypothetical protein	0.011
POM34	Pom34p	0.011
CSE1	Cse1p	0.011
SAP185	Sap185p	0.011
GRS2	Grs2p	0.011
CTM1	Ctm1p	0.011
REV7	Rev7p	0.011
RMD6	Rmd6p	0.011
YGR126W	hypothetical protein	0.011
YMR122W-A	hypothetical protein	0.011
GPX2	Gpx2p	0.011
PRR2	Prr2p	0.011
DCI1	Dci1p	0.011
POM152	Pom152p	0.011
AAD4	Aad4p	0.011
YEH2	Yeh2p	0.011
DNM1	Dnm1p	0.011
FRK1	Frk1p	0.011
YLR108C	hypothetical protein	0.011
YPR117W	hypothetical protein	0.011
YJL213W	hypothetical protein	0.011
KXD1	Kxd1p	0.011
YNL035C	hypothetical protein	0.011
BUR6	Bur6p	0.011
YLR460C	hypothetical protein	0.011
SAP155	Sap155p	0.011
IRC8	Irc8p	0.010
APL1	Apl1p	0.010
LRO1	Lro1p	0.010
YBR138C	hypothetical protein	0.010
CDD1	Cdd1p	0.010
IMA5	Ima5p	0.010
PDR5	Pdr5p	0.010
ENB1	Enb1p	0.010
IMA2	Ima2p	0.010
YFR035C	hypothetical protein	0.010
PAM16	Pam16p	0.010
YKL106C-A	hypothetical protein	0.010
HRT3	Hrt3p	0.010
SUB1	Sub1p	0.010
YLR422W	hypothetical protein	0.010
YAL037W	hypothetical protein	0.010
YER085C	hypothetical protein	0.010
YML119W	hypothetical protein	0.010
RTC5	Rtc5p	0.010
GLE1	Gle1p	0.010
YKL068W-A	hypothetical protein	0.010
UBA1	Uba1p	0.010
CIT2	Cit2p	0.010
RRP12	Rrp12p	0.010
SAM3	Sam3p	0.010
MPT5	Mpt5p	0.010
PML39	Pml39p	0.010
YKL070W	hypothetical protein	0.010
IST1	Ist1p	0.010
YPR159C-A	hypothetical protein	0.010
GIP3	Gip3p	0.010
HNT1	Hnt1p	0.010
PCL9	Pcl9p	0.010
HAL5	Hal5p	0.010
MDS3	Mds3p	0.010
YOR111W	hypothetical protein	0.010
YJL107C	hypothetical protein	0.010
ICS3	Ics3p	0.010
RGS2	Rgs2p	0.010
STE6	Ste6p	0.010
SNX41	Snx41p	0.010
YML007C-A	hypothetical protein	0.010
YLR012C	hypothetical protein	0.010
YLL053C	hypothetical protein	0.010
YBR184W	hypothetical protein	0.010
ATE1	Ate1p	0.010
NUP85	Nup85p	0.010
YBR071W	hypothetical protein	0.010
YOL114C	hypothetical protein	0.010
YDR182W-A	hypothetical protein	0.010
YDL012C	hypothetical protein	0.010
CTF13	Ctf13p	0.010
YIL046W-A	hypothetical protein	0.010
CHS1	Chs1p	0.010
ENO1	Eno1p	0.010
PHO8	Pho8p	0.010
YCR050C	hypothetical protein	0.010
YLR307C-A	hypothetical protein	0.010
PEX22	Pex22p	0.010