IMP

Process View

Saccharomyces cerevisiae

51 genes annotated in yeast

dna templated transcriptional preinitiation complex assembly

The aggregation, arrangement and bonding together of proteins on promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription.

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Known genes in the process in yeast Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "dna templated transcriptional preinitiation complex assembly"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "dna templated transcriptional preinitiation complex assembly" (in gray)

Name	Description	Probability
SPT15	Spt15p	0.999
TAF10	Taf10p	0.999
TAF4	Taf4p	0.987
BUR6	Bur6p	0.964
TAF12	Taf12p	0.887
TAF3	Taf3p	0.872
TOA1	Toa1p	0.854
RPT6	Rpt6p	0.836
TAF7	Taf7p	0.809
TAF6	Taf6p	0.740
SRB6	Srb6p	0.716
MED2	Med2p	0.690
TFG2	Tfg2p	0.671
MOT1	Mot1p	0.597
TAF9	Taf9p	0.559
SUA7	Sua7p	0.538
TFG1	Tfg1p	0.500
TOA2	Toa2p	0.447
MED1	Med1p	0.446
ROX3	Rox3p	0.438
RPN9	Rpn9p	0.392
PGD1	Pgd1p	0.346
TAF8	Taf8p	0.341
SPT16	Spt16p	0.340
TFA1	Tfa1p	0.338
RPT1	Rpt1p	0.290
BRF1	Brf1p	0.251
RAD23	Rad23p	0.243
KAP114	Kap114p	0.236
RPT2	Rpt2p	0.229
MED6	Med6p	0.223
GAL11	Gal11p	0.221
NHP6A	Nhp6ap	0.205
TAF5	Taf5p	0.203
CSE2	Cse2p	0.203
TAF11	Taf11p	0.192
MED4	Med4p	0.181
RPN13	Rpn13p	0.175
SPT20	Spt20p	0.162
MED8	Med8p	0.154
RPT3	Rpt3p	0.148
SRB7	Srb7p	0.148
RPT4	Rpt4p	0.146
SAS4	Sas4p	0.141
RPT5	Rpt5p	0.132
SRB4	Srb4p	0.131
SLU7	Slu7p	0.128
SOH1	Soh1p	0.128
SRB2	Srb2p	0.127
CAB3	Cab3p	0.122
RNA15	Rna15p	0.122
CKB1	Ckb1p	0.116
RPN6	Rpn6p	0.115
SUB1	Sub1p	0.115
SPT8	Spt8p	0.114
NUT2	Nut2p	0.113
SRB5	Srb5p	0.106
RPN1	Rpn1p	0.095
HHT1	Hht1p	0.092
RRT5	Rrt5p	0.090
MTC1	Mtc1p	0.088
RPB4	Rpb4p	0.087
SEM1	Sem1p	0.084
RTS2	Rts2p	0.065
HIT1	Hit1p	0.065
SRD1	Srd1p	0.064
HDA2	Hda2p	0.063
IOC4	Ioc4p	0.061
RPN2	Rpn2p	0.060
YLR264C-A	hypothetical protein	0.060
LEU2	Leu2p	0.057
ADA2	Ada2p	0.057
RPN10	Rpn10p	0.054
SPT2	Spt2p	0.052
DST1	Dst1p	0.051
YOL038C-A	hypothetical protein	0.050
YKL063C	hypothetical protein	0.050
TFC4	Tfc4p	0.049
RTF1	Rtf1p	0.047
MER1	Mer1p	0.047
ARP10	Arp10p	0.046
YLR162W	hypothetical protein	0.045
TAF2	Taf2p	0.045
ARG8	Arg8p	0.044
YPR157W	hypothetical protein	0.044
TYE7	Tye7p	0.044
HXT3	Hxt3p	0.043
RNR2	Rnr2p	0.042
TAF13	Taf13p	0.042
LEO1	Leo1p	0.042
TSC3	Tsc3p	0.042
YIR035C	hypothetical protein	0.041
CTK3	Ctk3p	0.041
YER137C	hypothetical protein	0.041
PDR16	Pdr16p	0.040
ATP6	Atp6p	0.039
SAS5	Sas5p	0.039
YLR042C	hypothetical protein	0.039
PEX19	Pex19p	0.037
PSY4	Psy4p	0.037
SPL2	Spl2p	0.036
MED7	Med7p	0.036
HTB1	Htb1p	0.036
CUP1-1	Cup1-1p	0.036
YAR068W	hypothetical protein	0.036
YRB2	Yrb2p	0.035
NGG1	Ngg1p	0.035
SCM4	Scm4p	0.035
BAT2	Bat2p	0.035
INO80	Ino80p	0.035
RPO21	Rpo21p	0.034
SWI1	Swi1p	0.034
ZPS1	Zps1p	0.034
NUT1	Nut1p	0.034
BIT61	Bit61p	0.034
SPT3	Spt3p	0.034
AUA1	Aua1p	0.034
SRO77	Sro77p	0.034
RRN5	Rrn5p	0.033
YBR013C	hypothetical protein	0.033
HPF1	Hpf1p	0.033
YKR075C	hypothetical protein	0.032
PTR2	Ptr2p	0.032
SSN3	Ssn3p	0.032
PRP21	Prp21p	0.031
UPS3	Ups3p	0.031
RPN7	Rpn7p	0.031
AQY2	Aqy2p	0.030
TFC7	Tfc7p	0.030
DIC1	Dic1p	0.030
URA3	Ura3p	0.030
IES6	Ies6p	0.030
MF(ALPHA)2	Mf(alpha)2p	0.030
YCH1	Ych1p	0.029
DIF1	Dif1p	0.029
BSC1	Bsc1p	0.029
ARR2	Arr2p	0.028
RIB2	Rib2p	0.028
PAF1	Paf1p	0.028
PRE7	Pre7p	0.028
YOL013W-A	hypothetical protein	0.028
ADH2	Adh2p	0.028
SFT1	Sft1p	0.027
FMT1	Fmt1p	0.027
WWM1	Wwm1p	0.027
CHA1	Cha1p	0.027
KNH1	Knh1p	0.027
MET4	Met4p	0.027
POB3	Pob3p	0.026
CUE4	Cue4p	0.026
BNA4	Bna4p	0.026
YAL037C-A	hypothetical protein	0.026
HSH49	Hsh49p	0.026
YPR096C	hypothetical protein	0.026
OPT2	Opt2p	0.026
CRP1	Crp1p	0.026
YLR040C	hypothetical protein	0.026
YIL151C	hypothetical protein	0.026
PHM6	Phm6p	0.026
CAB4	Cab4p	0.025
RPN8	Rpn8p	0.025
COS12	Cos12p	0.025
YMR317W	hypothetical protein	0.025
PAR32	Par32p	0.025
YLL053C	hypothetical protein	0.025
TIP1	Tip1p	0.025
TIR3	Tir3p	0.025
YOR302W	hypothetical protein	0.024
NRG2	Nrg2p	0.024
YAR066W	hypothetical protein	0.024
SNF11	Snf11p	0.024
TAH11	Tah11p	0.024
ECM2	Ecm2p	0.024
ATR1	Atr1p	0.024
DUR1,2	Dur1,2p	0.024
YPL067C	hypothetical protein	0.023
YAL064W	hypothetical protein	0.023
SWM2	Swm2p	0.023
RNP1	Rnp1p	0.023
YNL155W	hypothetical protein	0.023
MFA2	Mfa2p	0.023
MET8	Met8p	0.023
TAD2	Tad2p	0.023
PRS2	Prs2p	0.023
YDR034C-A	hypothetical protein	0.023
YBL029W	hypothetical protein	0.023
BIO2	Bio2p	0.023
YGL006W-A	hypothetical protein	0.023
CAR1	Car1p	0.023
YNL067W-B	hypothetical protein	0.023
IZH4	Izh4p	0.023
MF(ALPHA)1	Mf(alpha)1p	0.023
YBL044W	hypothetical protein	0.023
THG1	Thg1p	0.023
RAM2	Ram2p	0.022
SAK1	Sak1p	0.022
YLR126C	hypothetical protein	0.022
UFO1	Ufo1p	0.022
CPD1	Cpd1p	0.022
GYL1	Gyl1p	0.022
REE1	Ree1p	0.022
ALT2	Alt2p	0.022
RTT105	Rtt105p	0.022
YML003W	hypothetical protein	0.022
YNL018C	hypothetical protein	0.021
YJL181W	hypothetical protein	0.021
YJL107C	hypothetical protein	0.021
FCY21	Fcy21p	0.021
SUT1	Sut1p	0.021
YJL160C	hypothetical protein	0.021
YHR162W	hypothetical protein	0.021
BIO4	Bio4p	0.021
YLR412C-A	hypothetical protein	0.021
SOR2	Sor2p	0.021
CWC24	Cwc24p	0.021
SPT7	Spt7p	0.021
YJL218W	hypothetical protein	0.021
STB1	Stb1p	0.021
BDS1	Bds1p	0.021
HLJ1	Hlj1p	0.021
RIF2	Rif2p	0.021
SNF5	Snf5p	0.020
GPD2	Gpd2p	0.020
SPO74	Spo74p	0.020
HMRA1	Hmra1p	0.020
ENA5	Ena5p	0.020
YDL085C-A	hypothetical protein	0.020
YJR012C	hypothetical protein	0.020
FCY22	Fcy22p	0.020
CTS1	Cts1p	0.020
MMP1	Mmp1p	0.020
SET4	Set4p	0.020
PRE6	Pre6p	0.020
YKR041W	hypothetical protein	0.020
YIR042C	hypothetical protein	0.020
YOR365C	hypothetical protein	0.019
YDR524W-C	hypothetical protein	0.019
CAB2	Cab2p	0.019
YDR222W	hypothetical protein	0.019
HO	Hop	0.019
YPR027C	hypothetical protein	0.019
UME1	Ume1p	0.019
YNL162W-A	hypothetical protein	0.019
YOR012W	hypothetical protein	0.019
YML053C	hypothetical protein	0.019
YER186C	hypothetical protein	0.019
RFA1	Rfa1p	0.019
YGL235W	hypothetical protein	0.019
YNL033W	hypothetical protein	0.019
ARO10	Aro10p	0.019
YHK8	Yhk8p	0.019
MIG2	Mig2p	0.019
YCL001W-B	hypothetical protein	0.019
MOD5	Mod5p	0.018
YPL216W	hypothetical protein	0.018
TFA2	Tfa2p	0.018
NAP1	Nap1p	0.018
WSC4	Wsc4p	0.018
YLR278C	hypothetical protein	0.018
MUM2	Mum2p	0.018
YNR062C	hypothetical protein	0.018
KSH1	Ksh1p	0.018
YGR017W	hypothetical protein	0.018
YLR108C	hypothetical protein	0.018
PRE10	Pre10p	0.018
YNL058C	hypothetical protein	0.018
YML100W-A	hypothetical protein	0.018
HTA2	Hta2p	0.018
CET1	Cet1p	0.018
YFR035C	hypothetical protein	0.018
REB1	Reb1p	0.018
AIF1	Aif1p	0.018
LCL1	Lcl1p	0.017
YNR063W	hypothetical protein	0.017
YOR387C	hypothetical protein	0.017
ENB1	Enb1p	0.017
YNL034W	hypothetical protein	0.017
PBP4	Pbp4p	0.017
ZEO1	Zeo1p	0.017
SCW4	Scw4p	0.017
YDL012C	hypothetical protein	0.017
ZRT1	Zrt1p	0.017
REH1	Reh1p	0.017
YCR102C	hypothetical protein	0.017
SPS4	Sps4p	0.017
DOG1	Dog1p	0.017
YLR342W-A	hypothetical protein	0.017
FAU1	Fau1p	0.017
YJR120W	hypothetical protein	0.017
SSP1	Ssp1p	0.017
CTR3	Ctr3p	0.017
GLN1	Gln1p	0.017
SGE1	Sge1p	0.017
YSR3	Ysr3p	0.017
PFS1	Pfs1p	0.017
AAD15	Aad15p	0.017
SWC7	Swc7p	0.017
YCR015C	hypothetical protein	0.017
GAL4	Gal4p	0.017
YOR316C-A	hypothetical protein	0.017
PRP28	Prp28p	0.017
PTI1	Pti1p	0.017
YER175W-A	hypothetical protein	0.017
TIM22	Tim22p	0.017
XDJ1	Xdj1p	0.016
UTR4	Utr4p	0.016
PHO11	Pho11p	0.016
LUC7	Luc7p	0.016
GRX8	Grx8p	0.016
PCM1	Pcm1p	0.016
SPO19	Spo19p	0.016
SNU23	Snu23p	0.016
ICS3	Ics3p	0.016
PCL5	Pcl5p	0.016
SAM3	Sam3p	0.016
YEA6	Yea6p	0.016
KTR6	Ktr6p	0.016
YNL234W	hypothetical protein	0.016
YKL106C-A	hypothetical protein	0.016
YAR029W	hypothetical protein	0.016
RMD6	Rmd6p	0.016
APS1	Aps1p	0.016
BIO5	Bio5p	0.016
SEN54	Sen54p	0.016
TIM8	Tim8p	0.016
PYC2	Pyc2p	0.016
CFD1	Cfd1p	0.016
AAD6	Aad6p	0.016
ISU2	Isu2p	0.016
PCL1	Pcl1p	0.016
WSS1	Wss1p	0.016
YAL037W	hypothetical protein	0.016
UBC4	Ubc4p	0.015
SEO1	Seo1p	0.015
SWT21	Swt21p	0.015
YJL213W	hypothetical protein	0.015
YKL070W	hypothetical protein	0.015
SRX1	Srx1p	0.015
PSH1	Psh1p	0.015
YKL075C	hypothetical protein	0.015
SNM1	Snm1p	0.015
VBA5	Vba5p	0.015
FIT2	Fit2p	0.015
PCT1	Pct1p	0.015
NTR2	Ntr2p	0.015
YNL146C-A	hypothetical protein	0.015
YDR182W-A	hypothetical protein	0.015
YTA6	Yta6p	0.015
YKL068W-A	hypothetical protein	0.015
HAT2	Hat2p	0.015
YLR012C	hypothetical protein	0.015
SRT1	Srt1p	0.015
YLR460C	hypothetical protein	0.015
FSH2	Fsh2p	0.015
YLR406C-A	hypothetical protein	0.015
YPR159C-A	hypothetical protein	0.015
FRE7	Fre7p	0.015
YMR122W-A	hypothetical protein	0.015
PCL9	Pcl9p	0.015
YER034W	hypothetical protein	0.015
YMR001C-A	hypothetical protein	0.015
YMR295C	hypothetical protein	0.015
YOL097W-A	hypothetical protein	0.015
ALD5	Ald5p	0.015
GCV1	Gcv1p	0.014
HEM3	Hem3p	0.014
NAS6	Nas6p	0.014
YGR169C-A	hypothetical protein	0.014
YOR338W	hypothetical protein	0.014
YHR177W	hypothetical protein	0.014
SMP1	Smp1p	0.014
YNL097C-B	hypothetical protein	0.014
PUP2	Pup2p	0.014
BI4	Bi4p	0.014
YNL190W	hypothetical protein	0.014
YBR090C	hypothetical protein	0.014
TAE2	Tae2p	0.014
YCL021W-A	hypothetical protein	0.014
RCK1	Rck1p	0.014
YER085C	hypothetical protein	0.014
SLF1	Slf1p	0.014
FRE4	Fre4p	0.014
YOS1	Yos1p	0.014
ESC8	Esc8p	0.014
YPR036W-A	hypothetical protein	0.014
SPR6	Spr6p	0.014
GCR1	Gcr1p	0.014
YCR050C	hypothetical protein	0.014
YML119W	hypothetical protein	0.014
YOR268C	hypothetical protein	0.014
YOL086W-A	hypothetical protein	0.014
YPR153W	hypothetical protein	0.014
DLS1	Dls1p	0.014
SBH2	Sbh2p	0.014
YOL014W	hypothetical protein	0.014
YNL260C	hypothetical protein	0.014
CWP2	Cwp2p	0.014
YGR126W	hypothetical protein	0.014
MTC7	Mtc7p	0.014
SSL1	Ssl1p	0.014
SSO1	Sso1p	0.014
KXD1	Kxd1p	0.014
YPR108W-A	hypothetical protein	0.014
YLR307C-A	hypothetical protein	0.014
IMA5	Ima5p	0.014
ATO3	Ato3p	0.014
GUP2	Gup2p	0.014
YDR114C	hypothetical protein	0.013
RHO5	Rho5p	0.013
YGL015C	hypothetical protein	0.013
MUM3	Mum3p	0.013
YOR060C	hypothetical protein	0.013
MSA2	Msa2p	0.013
YHR050W-A	hypothetical protein	0.013
YIL046W-A	hypothetical protein	0.013
CWP1	Cwp1p	0.013
YAL065C	hypothetical protein	0.013
DJP1	Djp1p	0.013
TIR2	Tir2p	0.013
YJL147C	hypothetical protein	0.013
GCN4	Gcn4p	0.013
YJL028W	hypothetical protein	0.013
ASP3-4	Asp3-4p	0.013
YPL014W	hypothetical protein	0.013
HMLALPHA2	Hmlalpha2p	0.013
ALF1	Alf1p	0.013
DCG1	Dcg1p	0.013
YKL018C-A	hypothetical protein	0.013
SDT1	Sdt1p	0.013
CAF40	Caf40p	0.013
YJL047C-A	hypothetical protein	0.013
THP3	Thp3p	0.013
YAL018C	hypothetical protein	0.013
TRP1	Trp1p	0.013
APS3	Aps3p	0.013
HOR2	Hor2p	0.013
SPO77	Spo77p	0.013
TPM2	Tpm2p	0.013
YPL152W-A	hypothetical protein	0.013
AZR1	Azr1p	0.013
SLI1	Sli1p	0.013
YDR042C	hypothetical protein	0.013
YLR363W-A	hypothetical protein	0.013
KTR1	Ktr1p	0.013
YNL277W-A	hypothetical protein	0.013
HUG1	Hug1p	0.013
CUE2	Cue2p	0.013
DOS2	Dos2p	0.013
ERG20	Erg20p	0.012
FRE5	Fre5p	0.012
HEM13	Hem13p	0.012
YMR272W-B	hypothetical protein	0.012
PHO12	Pho12p	0.012
PUP3	Pup3p	0.012
YFL051C	hypothetical protein	0.012
YGR266W	hypothetical protein	0.012
GPX2	Gpx2p	0.012
YHR035W	hypothetical protein	0.012
YGR035C	hypothetical protein	0.012
YMR244W	hypothetical protein	0.012
BDF2	Bdf2p	0.012
PIR1	Pir1p	0.012
TPN1	Tpn1p	0.012
QDR2	Qdr2p	0.012
YIL102C	hypothetical protein	0.012
CHD1	Chd1p	0.012
APT2	Apt2p	0.012
RSC8	Rsc8p	0.012
DAL7	Dal7p	0.012
YIL161W	hypothetical protein	0.012
RSB1	Rsb1p	0.012
STE6	Ste6p	0.012
OLE1	Ole1p	0.012
LYS20	Lys20p	0.012
YSF3	Ysf3p	0.012
CEM1	Cem1p	0.012
YNL217W	hypothetical protein	0.012
RIO1	Rio1p	0.012
STP1	Stp1p	0.012
CTR9	Ctr9p	0.012
YER187W	hypothetical protein	0.012
YER152C	hypothetical protein	0.012
YIL014C-A	hypothetical protein	0.012
DAK2	Dak2p	0.012
UPF3	Upf3p	0.012
MCM4	Mcm4p	0.012
IMA2	Ima2p	0.012
DTR1	Dtr1p	0.012
YHR007C-A	hypothetical protein	0.012
HRB1	Hrb1p	0.012
MTR2	Mtr2p	0.012
YOR378W	hypothetical protein	0.012
OLI1	F0-ATP synthase subunit c (ATPase-associated proteolipid), encoded on the mitochondrial genome; mutation confers oligomycin resistance; expression is specifically dependent on the nuclear genes AEP1 and AEP2	0.012
RIF1	Rif1p	0.012
EXO70	Exo70p	0.012
YJR079W	hypothetical protein	0.012
MIG1	Mig1p	0.012
YMR175W-A	hypothetical protein	0.012
YLR036C	hypothetical protein	0.012
KRE29	Kre29p	0.012
RAD52	Rad52p	0.012
ERV2	Erv2p	0.012
ERJ5	Erj5p	0.012
POR2	Por2p	0.012
UGA4	Uga4p	0.012
SKS1	Sks1p	0.012
YIR018C-A	hypothetical protein	0.012
YML007C-A	hypothetical protein	0.011
YOR293C-A	hypothetical protein	0.011
YIR021W-A	hypothetical protein	0.011
GIS3	Gis3p	0.011
ALD6	Ald6p	0.011
SED5	Sed5p	0.011
YDR169C-A	hypothetical protein	0.011
ENT5	Ent5p	0.011
YNL046W	hypothetical protein	0.011
HSK3	Hsk3p	0.011
HMO1	Hmo1p	0.011
YAR028W	hypothetical protein	0.011
FRM2	Frm2p	0.011
TFB4	Tfb4p	0.011
HHT2	Hht2p	0.011
MOT3	Mot3p	0.011
PRE2	Pre2p	0.011
YRA2	Yra2p	0.011
SPC1	Spc1p	0.011
SLO1	Slo1p	0.011
HES1	Hes1p	0.011
RPI1	Rpi1p	0.011
YLR361C-A	hypothetical protein	0.011
AIM38	Aim38p	0.011
YKR045C	hypothetical protein	0.011
LCL2	Lcl2p	0.011
CAB1	Cab1p	0.011
YPL038W-A	hypothetical protein	0.011
PAD1	Pad1p	0.011
YER064C	hypothetical protein	0.011
YML054C-A	hypothetical protein	0.011
TAF1	Taf1p	0.011
YPR174C	hypothetical protein	0.011
AIM27	Aim27p	0.011
CTF13	Ctf13p	0.011
MDJ2	Mdj2p	0.011
RMI1	Rmi1p	0.011
YOL114C	hypothetical protein	0.011
RHB1	Rhb1p	0.011
YFR057W	hypothetical protein	0.011
HCH1	Hch1p	0.011
YER128W	hypothetical protein	0.011
SPP41	Spp41p	0.011
SSK22	Ssk22p	0.011
LRO1	Lro1p	0.011
RTT102	Rtt102p	0.011
DAN1	Dan1p	0.011
YMR074C	hypothetical protein	0.011
FET4	Fet4p	0.011
PEX21	Pex21p	0.011
YDL186W	hypothetical protein	0.011
YIL002W-A	hypothetical protein	0.011
ECM3	Ecm3p	0.011
MCH5	Mch5p	0.011
TIR1	Tir1p	0.011
MPH3	Mph3p	0.010
YLR445W	hypothetical protein	0.010
TFC6	Tfc6p	0.010
EDC1	Edc1p	0.010
CUL3	Cul3p	0.010
HXT8	Hxt8p	0.010
YDR246W-A	hypothetical protein	0.010
YBR219C	hypothetical protein	0.010
YLR132C	hypothetical protein	0.010
MHT1	Mht1p	0.010
SCT1	Sct1p	0.010
YPL066W	hypothetical protein	0.010
NOP10	Nop10p	0.010
ENA2	Ena2p	0.010
PRM3	Prm3p	0.010
RGS2	Rgs2p	0.010
HMF1	Hmf1p	0.010
BRL1	Brl1p	0.010
YMR242W-A	hypothetical protein	0.010
IME4	Ime4p	0.010
YJR111C	hypothetical protein	0.010
ELF1	Elf1p	0.010
FLR1	Flr1p	0.010
CNE1	Cne1p	0.010
CDC34	Cdc34p	0.010
HHO1	Hho1p	0.010
HOP2	Hop2p	0.010
MFA1	Mfa1p	0.010
RTC5	Rtc5p	0.010
GLT1	Glt1p	0.010
TIR4	Tir4p	0.010
TPC1	Tpc1p	0.010
LIF1	Lif1p	0.010
YBL039W-B	hypothetical protein	0.010