IMP

Process View

Saccharomyces cerevisiae

30 genes annotated in yeast

endonucleolytic cleavage in 5 ets of tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna

Endonucleolytic cleavage within the 5'-External Transcribed Spacer (ETS) of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. Endonucleolytic cleavage within the 5'-ETS of the pre-RNA is conserved as one of the early steps of rRNA processing in all eukaryotes, but the specific position of cleavage is variable.

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Known genes in the process in yeast Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "endonucleolytic cleavage in 5 ets of tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna "

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "endonucleolytic cleavage in 5 ets of tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna " (in gray)

Name	Description	Probability
FAF1	Faf1p	0.999
NOP14	Nop14p	0.999
KRR1	Krr1p	0.997
UTP4	Utp4p	0.996
UTP8	Utp8p	0.994
BMS1	Bms1p	0.994
MRD1	Mrd1p	0.993
RRP9	Rrp9p	0.993
BFR2	Bfr2p	0.992
BUD21	Bud21p	0.991
MPP10	Mpp10p	0.991
UTP10	Utp10p	0.991
UTP7	Utp7p	0.991
UTP9	Utp9p	0.989
SOF1	Sof1p	0.987
ESF1	Esf1p	0.986
UTP18	Utp18p	0.985
NAN1	Nan1p	0.982
ESF2	Esf2p	0.979
ENP2	Enp2p	0.975
DIP2	Dip2p	0.973
UTP6	Utp6p	0.957
UTP22	Utp22p	0.951
ECM16	Ecm16p	0.944
ENP1	Enp1p	0.944
UTP11	Utp11p	0.943
PWP2	Pwp2p	0.940
IMP3	Imp3p	0.934
UTP20	Utp20p	0.930
UTP25	Utp25p	0.805
KRE33	Kre33p	0.802
NOP6	Nop6p	0.787
UTP21	Utp21p	0.765
NOC4	Noc4p	0.710
RRP7	Rrp7p	0.652
RRP12	Rrp12p	0.633
RCL1	Rcl1p	0.582
RRP36	Rrp36p	0.567
SAS10	Sas10p	0.561
EFG1	Efg1p	0.547
LCP5	Lcp5p	0.534
UTP15	Utp15p	0.528
UTP23	Utp23p	0.450
PXR1	Pxr1p	0.441
NOP56	Nop56p	0.430
UTP13	Utp13p	0.379
UTP14	Utp14p	0.360
ROK1	Rok1p	0.358
FCF2	Fcf2p	0.301
NOP8	Nop8p	0.280
UTP30	Utp30p	0.210
RRP3	Rrp3p	0.193
FYV7	Fyv7p	0.174
NOB1	Nob1p	0.174
KRI1	Kri1p	0.151
NOP1	Nop1p	0.149
NSA2	Nsa2p	0.147
DIM1	Dim1p	0.142
SLX9	Slx9p	0.138
HCA4	Hca4p	0.136
RRP5	Rrp5p	0.133
IMP4	Imp4p	0.128
CMS1	Cms1p	0.125
RRP17	Rrp17p	0.124
RRP14	Rrp14p	0.122
BUD22	Bud22p	0.118
EMG1	Emg1p	0.116
TSR3	Tsr3p	0.113
DBP8	Dbp8p	0.111
RPB10	Rpb10p	0.101
DHR2	Dhr2p	0.095
FCF1	Fcf1p	0.087
RIO1	Rio1p	0.087
BCD1	Bcd1p	0.076
RRP45	Rrp45p	0.065
PRS2	Prs2p	0.061
PNO1	Pno1p	0.060
UTP5	Utp5p	0.055
URA3	Ura3p	0.054
SRD1	Srd1p	0.052
NOP9	Nop9p	0.049
YLR264C-A	hypothetical protein	0.048
TMA16	Tma16p	0.043
CNS1	Cns1p	0.043
LEU2	Leu2p	0.042
SEC65	Sec65p	0.042
YLR162W	hypothetical protein	0.041
LRP1	Lrp1p	0.040
RRT14	Rrt14p	0.040
SUI1	Sui1p	0.038
YOL038C-A	hypothetical protein	0.038
SGD1	Sgd1p	0.038
MER1	Mer1p	0.037
SQT1	Sqt1p	0.037
GFD2	Gfd2p	0.036
ARP10	Arp10p	0.036
DCD1	Dcd1p	0.035
RPC10	Rpc10p	0.034
SPL2	Spl2p	0.034
HXT3	Hxt3p	0.034
TSR1	Tsr1p	0.033
CUP1-1	Cup1-1p	0.033
YPR157W	hypothetical protein	0.033
YLR042C	hypothetical protein	0.033
ATP6	Atp6p	0.032
RPC11	Rpc11p	0.032
ARG8	Arg8p	0.031
TMA23	Tma23p	0.031
RIO2	Rio2p	0.031
SPB1	Spb1p	0.031
IZH4	Izh4p	0.030
RPS17B	Rps17bp	0.030
YAR068W	hypothetical protein	0.030
SCM4	Scm4p	0.029
NOP4	Nop4p	0.029
AUA1	Aua1p	0.028
RSA1	Rsa1p	0.027
HPF1	Hpf1p	0.027
YBR013C	hypothetical protein	0.027
YOL013W-A	hypothetical protein	0.026
FAL1	Fal1p	0.026
RPS4A	Rps4ap	0.026
ZPS1	Zps1p	0.026
SNU56	Snu56p	0.026
NOP58	Nop58p	0.025
FCY21	Fcy21p	0.025
FMT1	Fmt1p	0.025
MF(ALPHA)2	Mf(alpha)2p	0.025
RRP15	Rrp15p	0.025
YGR035C	hypothetical protein	0.025
CGR1	Cgr1p	0.024
TRM112	Trm112p	0.024
MFA2	Mfa2p	0.024
RPC53	Rpc53p	0.024
YIL151C	hypothetical protein	0.023
PHM6	Phm6p	0.023
YAL064W	hypothetical protein	0.023
UBP1	Ubp1p	0.023
UBP10	Ubp10p	0.023
CPD1	Cpd1p	0.022
RLP7	Rlp7p	0.022
BSC1	Bsc1p	0.022
OPT2	Opt2p	0.022
CRP1	Crp1p	0.022
MAK21	Mak21p	0.022
ALT2	Alt2p	0.022
RIX7	Rix7p	0.022
PRP28	Prp28p	0.022
YAR066W	hypothetical protein	0.022
UPS3	Ups3p	0.022
YLR040C	hypothetical protein	0.021
RPA43	Rpa43p	0.021
COS12	Cos12p	0.021
DIC1	Dic1p	0.021
BCP1	Bcp1p	0.021
MET8	Met8p	0.021
HO	Hop	0.021
POP6	Pop6p	0.021
YPR096C	hypothetical protein	0.021
YAL037C-A	hypothetical protein	0.021
MMP1	Mmp1p	0.021
RPC31	Rpc31p	0.020
YPL067C	hypothetical protein	0.020
NOP16	Nop16p	0.020
YBL029W	hypothetical protein	0.020
TCA17	Tca17p	0.020
ADH2	Adh2p	0.020
RRT5	Rrt5p	0.020
YIR035C	hypothetical protein	0.020
TYE7	Tye7p	0.020
YGL006W-A	hypothetical protein	0.020
TSC3	Tsc3p	0.019
RNP1	Rnp1p	0.019
RPS8B	Rps8bp	0.019
NRG2	Nrg2p	0.019
TIR3	Tir3p	0.019
YER137C	hypothetical protein	0.019
YMR317W	hypothetical protein	0.018
GPX2	Gpx2p	0.018
MAK16	Mak16p	0.018
SAM3	Sam3p	0.018
MF(ALPHA)1	Mf(alpha)1p	0.018
YDL121C	hypothetical protein	0.018
CAR1	Car1p	0.018
SWM2	Swm2p	0.018
YKR075C	hypothetical protein	0.018
PTR2	Ptr2p	0.018
YPR027C	hypothetical protein	0.018
YNL162W-A	hypothetical protein	0.017
YJL160C	hypothetical protein	0.017
YML003W	hypothetical protein	0.017
BIO2	Bio2p	0.017
YGL235W	hypothetical protein	0.017
SSF2	Ssf2p	0.017
MIG2	Mig2p	0.017
SSP1	Ssp1p	0.017
AQY2	Aqy2p	0.017
YNR062C	hypothetical protein	0.017
YNL058C	hypothetical protein	0.017
SET4	Set4p	0.017
YNL067W-B	hypothetical protein	0.017
YML100W-A	hypothetical protein	0.017
YBT1	Ybt1p	0.017
YJR120W	hypothetical protein	0.017
RRN5	Rrn5p	0.017
YDR034C-A	hypothetical protein	0.016
YNL033W	hypothetical protein	0.016
YLR412C-A	hypothetical protein	0.016
YIR042C	hypothetical protein	0.016
DUR1,2	Dur1,2p	0.016
PRP21	Prp21p	0.016
GLN1	Gln1p	0.016
BI4	Bi4p	0.016
YER186C	hypothetical protein	0.016
YBL044W	hypothetical protein	0.016
WSC4	Wsc4p	0.016
YOR012W	hypothetical protein	0.016
RSN1	Rsn1p	0.016
NUP49	Nup49p	0.016
YSR3	Ysr3p	0.016
MTC7	Mtc7p	0.016
MFA1	Mfa1p	0.016
GYL1	Gyl1p	0.016
PHO12	Pho12p	0.016
ARR2	Arr2p	0.015
YHK8	Yhk8p	0.015
THG1	Thg1p	0.015
NIP7	Nip7p	0.015
YMR122W-A	hypothetical protein	0.015
SPS4	Sps4p	0.015
YNL018C	hypothetical protein	0.015
YKR041W	hypothetical protein	0.015
FCY22	Fcy22p	0.015
YDL085C-A	hypothetical protein	0.015
ENA5	Ena5p	0.015
JIP5	Jip5p	0.015
SWC7	Swc7p	0.015
SPO74	Spo74p	0.015
YKR045C	hypothetical protein	0.015
BNA4	Bna4p	0.015
ICS3	Ics3p	0.015
FRE4	Fre4p	0.015
IPI1	Ipi1p	0.015
TAD2	Tad2p	0.015
TAT1	Tat1p	0.015
ARO10	Aro10p	0.015
SPO77	Spo77p	0.015
PTI1	Pti1p	0.015
AQR1	Aqr1p	0.015
INM1	Inm1p	0.015
YNL034W	hypothetical protein	0.015
YLR342W-A	hypothetical protein	0.014
YFR035C	hypothetical protein	0.014
KSH1	Ksh1p	0.014
RTS2	Rts2p	0.014
YKL070W	hypothetical protein	0.014
YJL107C	hypothetical protein	0.014
CDC60	Cdc60p	0.014
CAB2	Cab2p	0.014
YDR524W-C	hypothetical protein	0.014
JLP2	Jlp2p	0.014
YCR102C	hypothetical protein	0.014
BDS1	Bds1p	0.014
CTR3	Ctr3p	0.014
YOR387C	hypothetical protein	0.014
YCL001W-B	hypothetical protein	0.014
BIO5	Bio5p	0.014
LCL1	Lcl1p	0.014
SEO1	Seo1p	0.014
REE1	Ree1p	0.014
NUP82	Nup82p	0.014
BAT2	Bat2p	0.014
YGL015C	hypothetical protein	0.013
TAF11	Taf11p	0.013
YCH1	Ych1p	0.013
YER175W-A	hypothetical protein	0.013
YOL014W	hypothetical protein	0.013
ZRT1	Zrt1p	0.013
SFT1	Sft1p	0.013
KNH1	Knh1p	0.013
APT2	Apt2p	0.013
BIO4	Bio4p	0.013
YKL106C-A	hypothetical protein	0.013
SOR2	Sor2p	0.013
SRT1	Srt1p	0.013
YLR363W-A	hypothetical protein	0.013
YLR460C	hypothetical protein	0.013
SPP381	Spp381p	0.013
CTS1	Cts1p	0.013
YJL181W	hypothetical protein	0.013
FUI1	Fui1p	0.013
MUM3	Mum3p	0.013
YER085C	hypothetical protein	0.013
AAP1	Aap1p	0.013
VBA5	Vba5p	0.013
RKI1	Rki1p	0.013
CHA1	Cha1p	0.013
YOR268C	hypothetical protein	0.013
SPO19	Spo19p	0.013
RPF1	Rpf1p	0.012
HEM3	Hem3p	0.012
YNL097C-B	hypothetical protein	0.012
YFL051C	hypothetical protein	0.012
GAR1	Gar1p	0.012
YJR129C	hypothetical protein	0.012
LTV1	Ltv1p	0.012
BRN1	Brn1p	0.012
YJL218W	hypothetical protein	0.012
URB2	Urb2p	0.012
YNR063W	hypothetical protein	0.012
YGR126W	hypothetical protein	0.012
YOL097W-A	hypothetical protein	0.012
RPL22B	Rpl22bp	0.012
YPR159C-A	hypothetical protein	0.012
YOR316C-A	hypothetical protein	0.012
YJL028W	hypothetical protein	0.012
YHR177W	hypothetical protein	0.012
ATO3	Ato3p	0.012
SUT1	Sut1p	0.012
YLR406C-A	hypothetical protein	0.012
HMRA1	Hmra1p	0.012
YLR012C	hypothetical protein	0.012
PHO11	Pho11p	0.012
YMR001C-A	hypothetical protein	0.012
BAP3	Bap3p	0.012
URA2	Ura2p	0.012
YPR153W	hypothetical protein	0.012
DOG1	Dog1p	0.012
FIT2	Fit2p	0.012
YCR050C	hypothetical protein	0.012
RIX1	Rix1p	0.012
MDJ2	Mdj2p	0.012
CUE2	Cue2p	0.011
DAD3	Dad3p	0.011
NMD3	Nmd3p	0.011
YLF2	Ylf2p	0.011
PZF1	Pzf1p	0.011
HES1	Hes1p	0.011
AAD15	Aad15p	0.011
YDL186W	hypothetical protein	0.011
PCM1	Pcm1p	0.011
YJL213W	hypothetical protein	0.011
YGR169C-A	hypothetical protein	0.011
IMA5	Ima5p	0.011
PCL5	Pcl5p	0.011
YDR182W-A	hypothetical protein	0.011
YMR244W	hypothetical protein	0.011
YOR365C	hypothetical protein	0.011
YCL021W-A	hypothetical protein	0.011
YNL234W	hypothetical protein	0.011
ICS2	Ics2p	0.011
YJL047C-A	hypothetical protein	0.011
YKL068W-A	hypothetical protein	0.011
YIL046W-A	hypothetical protein	0.011
YHL012W	hypothetical protein	0.011
FRE5	Fre5p	0.011
YOR302W	hypothetical protein	0.011
YER064C	hypothetical protein	0.011
EBP2	Ebp2p	0.011
YPR108W-A	hypothetical protein	0.011
RTT105	Rtt105p	0.011
AZR1	Azr1p	0.011
PDC5	Pdc5p	0.011
YGL262W	hypothetical protein	0.011
YDL012C	hypothetical protein	0.011
YOR378W	hypothetical protein	0.010
DAN1	Dan1p	0.010
LAA1	Laa1p	0.010
RSA4	Rsa4p	0.010
PCL9	Pcl9p	0.010
YAR029W	hypothetical protein	0.010
KRE29	Kre29p	0.010
YDR222W	hypothetical protein	0.010
RET1	Ret1p	0.010
PIR1	Pir1p	0.010
YAL018C	hypothetical protein	0.010
YAL037W	hypothetical protein	0.010
YEA6	Yea6p	0.010
RRS1	Rrs1p	0.010
YIR021W-A	hypothetical protein	0.010
IMA2	Ima2p	0.010
YLR307C-A	hypothetical protein	0.010
NSE4	Nse4p	0.010
YAL065C	hypothetical protein	0.010
ATR1	Atr1p	0.010
FRE7	Fre7p	0.010
TIR4	Tir4p	0.010
RRP1	Rrp1p	0.010