IMP

Process View

Saccharomyces cerevisiae

42 genes annotated in yeast

dna catabolic process

The cellular DNA metabolic process resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one.

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In addition to gene-name show these genes:

Known genes in the process in yeast Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "dna catabolic process"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "dna catabolic process" (in gray)

Name	Description	Probability	Func Analog Organism
RAD1	Rad1p	0.804
XRS2	Xrs2p	0.602
RAD10	Rad10p	0.486
RAD59	Rad59p	0.436
MSH2	Msh2p	0.417
RAD14	Rad14p	0.216
ASF1	Asf1p	0.191
RAD18	Rad18p	0.180
MLH1	Mlh1p	0.174
RAD52	Rad52p	0.167
TEL1	Tel1p	0.129
RFA1	Rfa1p	0.129
RAD53	Rad53p	0.109
RFA3	Rfa3p	0.108
MRC1	Mrc1p	0.107
MSH3	Msh3p	0.101
POL32	Pol32p	0.091
EXO1	Exo1p	0.089
RAD2	Rad2p	0.088
MEC1	Mec1p	0.082	Fly
RAD5	Rad5p	0.075
ULP1	Ulp1p	0.065
MMS1	Mms1p	0.064
DNA2	Dna2p	0.063
SAW1	Saw1p	0.063
HDA2	Hda2p	0.062
MSH6	Msh6p	0.062
REV3	Rev3p	0.059
SLX4	Slx4p	0.054
PMS1	Pms1p	0.054
SEN1	Sen1p	0.049
MGS1	Mgs1p	0.049
SAE2	Sae2p	0.047
TIM44	Tim44p	0.047
THO2	Tho2p	0.044
SIR3	Sir3p	0.042
NTG1	Ntg1p	0.042
RPS5	Rps5p	0.041
TOP1	Top1p	0.041
RMI1	Rmi1p	0.038
RAD16	Rad16p	0.037
PIF1	Pif1p	0.035
MUS81	Mus81p	0.035
JHD2	Jhd2p	0.034
RAD26	Rad26p	0.033
CAK1	Cak1p	0.032
MDJ1	Mdj1p	0.032
YLR264C-A	hypothetical protein	0.032
SGS1	Sgs1p	0.032
APN2	Apn2p	0.032
RAD7	Rad7p	0.031
MPH1	Mph1p	0.031
SIS2	Sis2p	0.031
RLF2	Rlf2p	0.031
YBL044W	hypothetical protein	0.030
ADI1	Adi1p	0.030
APN1	Apn1p	0.030
DUN1	Dun1p	0.030
RAD17	Rad17p	0.029
SRD1	Srd1p	0.029
NTA1	Nta1p	0.029
URA6	Ura6p	0.029
SMC6	Smc6p	0.028
YLR419W	hypothetical protein	0.028
PSO2	Pso2p	0.028
ALT2	Alt2p	0.027
LEU2	Leu2p	0.027
YLR162W	hypothetical protein	0.027
RPL7B	Rpl7bp	0.026
YOL038C-A	hypothetical protein	0.026
YPL068C	hypothetical protein	0.026
HO	Hop	0.025
YAR068W	hypothetical protein	0.025
DOT1	Dot1p	0.025
PET309	Pet309p	0.025
GYL1	Gyl1p	0.025
YIR035C	hypothetical protein	0.025
POM34	Pom34p	0.025
URA3	Ura3p	0.024
ARG8	Arg8p	0.024
LIF1	Lif1p	0.024
CUP1-1	Cup1-1p	0.024
UGO1	Ugo1p	0.024
MER1	Mer1p	0.024
RAD24	Rad24p	0.023
YLR363W-A	hypothetical protein	0.023
SHU1	Shu1p	0.023
SUT2	Sut2p	0.023
MMS4	Mms4p	0.023
CLN2	Cln2p	0.023
YPL260W	hypothetical protein	0.023
REV1	Rev1p	0.022
PTP3	Ptp3p	0.022
KTI12	Kti12p	0.022
SOM1	Som1p	0.022
THP2	Thp2p	0.022
POL31	Pol31p	0.022
HST3	Hst3p	0.021
ATP6	Atp6p	0.021
YBR013C	hypothetical protein	0.021
SMC4	Smc4p	0.021
YAR066W	hypothetical protein	0.020
YLR042C	hypothetical protein	0.020
SLX1	Slx1p	0.020
RAD51	Rad51p	0.020
FMT1	Fmt1p	0.020
PUT2	Put2p	0.020
ECM2	Ecm2p	0.020
NMA2	Nma2p	0.020
IRC5	Irc5p	0.020
UPS3	Ups3p	0.020
YIL151C	hypothetical protein	0.020
AUA1	Aua1p	0.019
JAC1	Jac1p	0.019
CHA1	Cha1p	0.019
EMW1	Emw1p	0.019
AQR1	Aqr1p	0.019
PHO3	Pho3p	0.019
YOL013W-A	hypothetical protein	0.019
HXT3	Hxt3p	0.019
PET112	Pet112p	0.019
YNL234W	hypothetical protein	0.018
PDC6	Pdc6p	0.018
YJL181W	hypothetical protein	0.018
RNH201	Rnh201p	0.018
NUP60	Nup60p	0.018
YPR157W	hypothetical protein	0.018
MF(ALPHA)2	Mf(alpha)2p	0.018
SOR2	Sor2p	0.018
PRM7	Prm7p	0.018
MET8	Met8p	0.018
ARP10	Arp10p	0.018
HPF1	Hpf1p	0.018
RAD54	Rad54p	0.018
CPD1	Cpd1p	0.018
RPS6A	Rps6ap	0.018
YKU80	Yku80p	0.018
TPC1	Tpc1p	0.018
TAZ1	Taz1p	0.018
MAG1	Mag1p	0.018
BYE1	Bye1p	0.018
DIC1	Dic1p	0.018
NOP8	Nop8p	0.018
EST2	Est2p	0.017
PRS2	Prs2p	0.017
SSL2	Ssl2p	0.017
PHO81	Pho81p	0.017
RPS2	Rps2p	0.017
YPR096C	hypothetical protein	0.017
PTI1	Pti1p	0.017
PCL9	Pcl9p	0.017
HMRA1	Hmra1p	0.017
CPR2	Cpr2p	0.017
ECM29	Ecm29p	0.017
GLT1	Glt1p	0.017
GLG2	Glg2p	0.017
FUI1	Fui1p	0.017
HRR25	Hrr25p	0.017
PCL2	Pcl2p	0.017
SRT1	Srt1p	0.017
ATC1	Atc1p	0.017
SCM4	Scm4p	0.017
TYE7	Tye7p	0.017
RNP1	Rnp1p	0.017
ZPS1	Zps1p	0.017
SMM1	Smm1p	0.017
YML053C	hypothetical protein	0.017
DUR1,2	Dur1,2p	0.016
ALD6	Ald6p	0.016
OPT2	Opt2p	0.016
TIP1	Tip1p	0.016
REE1	Ree1p	0.016
YKR075C	hypothetical protein	0.016
OYE3	Oye3p	0.016
SPL2	Spl2p	0.016
YPL067C	hypothetical protein	0.016
CTR3	Ctr3p	0.016
YJL147C	hypothetical protein	0.016
NRG2	Nrg2p	0.016
WSS1	Wss1p	0.016
SPE3	Spe3p	0.016
YML003W	hypothetical protein	0.016
AIF1	Aif1p	0.016
COS12	Cos12p	0.016
IZH4	Izh4p	0.016
SSL1	Ssl1p	0.016
YAL064W	hypothetical protein	0.016
NUC1	Nuc1p	0.016
ADH2	Adh2p	0.016
KEL1	Kel1p	0.016
ARR2	Arr2p	0.016
CSL4	Csl4p	0.015
YLR040C	hypothetical protein	0.015
YMR317W	hypothetical protein	0.015
GIP3	Gip3p	0.015
AAD15	Aad15p	0.015
AHA1	Aha1p	0.015
MFA2	Mfa2p	0.015
SRX1	Srx1p	0.015
PCL5	Pcl5p	0.015
YMR124W	hypothetical protein	0.015
RTT105	Rtt105p	0.015
BIT61	Bit61p	0.015
TIM50	Tim50p	0.015
TIR3	Tir3p	0.015
GFD2	Gfd2p	0.015
YAL037C-A	hypothetical protein	0.015
RNH203	Rnh203p	0.015
DEG1	Deg1p	0.015
YPL066W	hypothetical protein	0.015
HLR1	Hlr1p	0.015
YPL216W	hypothetical protein	0.015
YNL035C	hypothetical protein	0.015
GLN1	Gln1p	0.015
ZRT1	Zrt1p	0.015
BSC1	Bsc1p	0.015
YJR120W	hypothetical protein	0.015
ENA5	Ena5p	0.015
NUR1	Nur1p	0.015
YGL006W-A	hypothetical protein	0.015
AHP1	Ahp1p	0.015
YPL014W	hypothetical protein	0.015
SSK22	Ssk22p	0.015
PTR2	Ptr2p	0.015
UTP20	Utp20p	0.015
YBL029W	hypothetical protein	0.015
KIC1	Kic1p	0.014
BDS1	Bds1p	0.014
WSC4	Wsc4p	0.014
SSP1	Ssp1p	0.014
YIR042C	hypothetical protein	0.014
YNL067W-B	hypothetical protein	0.014
TSC3	Tsc3p	0.014
YNL033W	hypothetical protein	0.014
DSE3	Dse3p	0.014
TRP1	Trp1p	0.014
YOR022C	hypothetical protein	0.014
DIF1	Dif1p	0.014
KNH1	Knh1p	0.014
HNT3	Hnt3p	0.014
YDR222W	hypothetical protein	0.014
SEN54	Sen54p	0.014
RPS8B	Rps8bp	0.014
HYM1	Hym1p	0.014
TOR2	Tor2p	0.014
BUL2	Bul2p	0.014
YOL014W	hypothetical protein	0.014
ICS2	Ics2p	0.014
ARO10	Aro10p	0.014
YML100W-A	hypothetical protein	0.014
BI4	Bi4p	0.014
PHM6	Phm6p	0.014
DOP1	Dop1p	0.014
PCL1	Pcl1p	0.014
MTG1	Mtg1p	0.014
YDR034C-A	hypothetical protein	0.014
LCL1	Lcl1p	0.014
YMR122W-A	hypothetical protein	0.014
PDS5	Pds5p	0.014
MF(ALPHA)1	Mf(alpha)1p	0.014
YKR041W	hypothetical protein	0.014
YJL055W	hypothetical protein	0.014
GEA2	Gea2p	0.014
YDL085C-A	hypothetical protein	0.014
PSY2	Psy2p	0.014
RNR2	Rnr2p	0.014
YLR063W	hypothetical protein	0.014
YER010C	hypothetical protein	0.014
YNL162W-A	hypothetical protein	0.013
CAR1	Car1p	0.013
DAK2	Dak2p	0.013
AQY2	Aqy2p	0.013
SPT2	Spt2p	0.013
CRP1	Crp1p	0.013
DOG1	Dog1p	0.013
YER064C	hypothetical protein	0.013
YNL034W	hypothetical protein	0.013
ZIP1	Zip1p	0.013
FCY21	Fcy21p	0.013
YGL015C	hypothetical protein	0.013
TOP3	Top3p	0.013
SPS4	Sps4p	0.013
DDC1	Ddc1p	0.013
YNL018C	hypothetical protein	0.013
BNA4	Bna4p	0.013
CST9	Cst9p	0.013
GLO2	Glo2p	0.013
IRC20	Irc20p	0.013
LRS4	Lrs4p	0.013
YJL160C	hypothetical protein	0.013
TOS4	Tos4p	0.013
HIR1	Hir1p	0.013
YDL012C	hypothetical protein	0.013
MET32	Met32p	0.013
PCL7	Pcl7p	0.013
FIT2	Fit2p	0.013
MIG2	Mig2p	0.013
TIM22	Tim22p	0.013
YOR338W	hypothetical protein	0.013
ZRT2	Zrt2p	0.013
YOR012W	hypothetical protein	0.013
YNL146W	hypothetical protein	0.013
YJL107C	hypothetical protein	0.013
YOR387C	hypothetical protein	0.013
BIO2	Bio2p	0.013
HOR2	Hor2p	0.013
XDJ1	Xdj1p	0.013
FCY22	Fcy22p	0.013
SET4	Set4p	0.013
PRM4	Prm4p	0.013
YLR281C	hypothetical protein	0.013
YPR027C	hypothetical protein	0.013
MCH5	Mch5p	0.013
HOS2	Hos2p	0.013
YGR102C	hypothetical protein	0.013
PRI1	Pri1p	0.013
FPR3	Fpr3p	0.013
CDD1	Cdd1p	0.013
MMP1	Mmp1p	0.013
YNR062C	hypothetical protein	0.013
YGR126W	hypothetical protein	0.013
FUR4	Fur4p	0.013
ERT1	Ert1p	0.013
RRT5	Rrt5p	0.013
YCL021W-A	hypothetical protein	0.013
BIO3	Bio3p	0.013
YAR029W	hypothetical protein	0.013
AMD1	Amd1p	0.013
YNL058C	hypothetical protein	0.013
YLR412C-A	hypothetical protein	0.012
LRO1	Lro1p	0.012
YIL089W	hypothetical protein	0.012
PAN3	Pan3p	0.012
RRP45	Rrp45p	0.012
UBA1	Uba1p	0.012
ICP55	Icp55p	0.012
DSS1	Dss1p	0.012
YGL235W	hypothetical protein	0.012
YCH1	Ych1p	0.012
YOR365C	hypothetical protein	0.012
ECM10	Ecm10p	0.012	Yeast
YCR102C	hypothetical protein	0.012
NCE103	Nce103p	0.012
SKI7	Ski7p	0.012
CTS2	Cts2p	0.012
YCL001W-B	hypothetical protein	0.012
YLR012C	hypothetical protein	0.012
YJR012C	hypothetical protein	0.012
PBP2	Pbp2p	0.012
TRL1	Trl1p	0.012
CLB6	Clb6p	0.012
YPR036W-A	hypothetical protein	0.012
YLR108C	hypothetical protein	0.012
YCR050C	hypothetical protein	0.012
PCT1	Pct1p	0.012
MPT5	Mpt5p	0.012
YML079W	hypothetical protein	0.012
NAM2	Nam2p	0.012
YHR177W	hypothetical protein	0.012
SRO77	Sro77p	0.012
TAD2	Tad2p	0.012
IMA2	Ima2p	0.012
ANB1	Anb1p	0.012
ISU2	Isu2p	0.012
ENB1	Enb1p	0.012
YNL295W	hypothetical protein	0.012
YKR045C	hypothetical protein	0.012
RRN5	Rrn5p	0.012
SCS22	Scs22p	0.012
RSN1	Rsn1p	0.012
RPS4B	Rps4bp	0.012
FAD1	Fad1p	0.012
KRE29	Kre29p	0.012
YLR342W-A	hypothetical protein	0.012
ICS3	Ics3p	0.012
BTT1	Btt1p	0.012
SPO77	Spo77p	0.012
RPL15B	Rpl15bp	0.012
RPL19A	Rpl19ap	0.012
YLR460C	hypothetical protein	0.012
YFL051C	hypothetical protein	0.012
KSH1	Ksh1p	0.012
YER085C	hypothetical protein	0.012
YKL106C-A	hypothetical protein	0.012
YFR035C	hypothetical protein	0.012
SUA5	Sua5p	0.012
MMS22	Mms22p	0.012
YSR3	Ysr3p	0.012
RFX1	Rfx1p	0.011
YJL213W	hypothetical protein	0.011
YKL070W	hypothetical protein	0.011
MEU1	Meu1p	0.011
AAD6	Aad6p	0.011
RMD6	Rmd6p	0.011
YPR159C-A	hypothetical protein	0.011
YNR063W	hypothetical protein	0.011
YNL146C-A	hypothetical protein	0.011
YHB1	Yhb1p	0.011
CNE1	Cne1p	0.011
OLI1	F0-ATP synthase subunit c (ATPase-associated proteolipid), encoded on the mitochondrial genome; mutation confers oligomycin resistance; expression is specifically dependent on the nuclear genes AEP1 and AEP2	0.011
UTR1	Utr1p	0.011
YOR342C	hypothetical protein	0.011
YIL014C-A	hypothetical protein	0.011
NGL1	Ngl1p	0.011
MMS21	Mms21p	0.011
BFR1	Bfr1p	0.011
YER175W-A	hypothetical protein	0.011
CAB2	Cab2p	0.011
YDR182W-A	hypothetical protein	0.011
PHO11	Pho11p	0.011
AAT1	Aat1p	0.011
YKL068W-A	hypothetical protein	0.011
SEO1	Seo1p	0.011
ART10	Art10p	0.011
NFI1	Nfi1p	0.011
YNL097C-B	hypothetical protein	0.011
YNL217W	hypothetical protein	0.011
PAM18	Pam18p	0.011
MPH3	Mph3p	0.011
ECM15	Ecm15p	0.011
GPX2	Gpx2p	0.011
SAM3	Sam3p	0.011
FRE4	Fre4p	0.011
BAR1	Bar1p	0.011
SLI1	Sli1p	0.011
YHK8	Yhk8p	0.011
YHR035W	hypothetical protein	0.011
IRC19	Irc19p	0.011
MDJ2	Mdj2p	0.011
EDS1	Eds1p	0.011
CRN1	Crn1p	0.011
SPO19	Spo19p	0.011
TOS2	Tos2p	0.011
YOR302W	hypothetical protein	0.011
CTF13	Ctf13p	0.011
DNL4	Dnl4p	0.011
SGE1	Sge1p	0.011
FRE5	Fre5p	0.011
YOR296W	hypothetical protein	0.011
YHR140W	hypothetical protein	0.011
MUM3	Mum3p	0.011
YGR169C-A	hypothetical protein	0.011
IMA5	Ima5p	0.011
YLR406C-A	hypothetical protein	0.011
YEN1	Yen1p	0.011
REX2	Rex2p	0.011
KTR5	Ktr5p	0.011
MLH3	Mlh3p	0.011
SIR2	Sir2p	0.011
YGR035C	hypothetical protein	0.011
AIM38	Aim38p	0.011
YFR057W	hypothetical protein	0.011
GNP1	Gnp1p	0.011
FRE3	Fre3p	0.011
HEM3	Hem3p	0.011
YDR109C	hypothetical protein	0.011
RTT101	Rtt101p	0.011
YDR114C	hypothetical protein	0.011
DAS2	Das2p	0.011
ATO3	Ato3p	0.011
YBL081W	hypothetical protein	0.011
CUR1	Cur1p	0.011
FRE7	Fre7p	0.011
SKG6	Skg6p	0.011
YEL057C	hypothetical protein	0.011
BIO4	Bio4p	0.011
SWC7	Swc7p	0.011
RPS20	Rps20p	0.011
AZR1	Azr1p	0.011
HEM14	Hem14p	0.011
MSI1	Msi1p	0.011
YOL097W-A	hypothetical protein	0.011
MTC7	Mtc7p	0.011
YOR316C-A	hypothetical protein	0.011
YNL193W	hypothetical protein	0.011
YOL086W-A	hypothetical protein	0.011
ISR1	Isr1p	0.011
YDR524W-C	hypothetical protein	0.011
YLL053C	hypothetical protein	0.011
YIL046W-A	hypothetical protein	0.011
CAB4	Cab4p	0.011
VBA5	Vba5p	0.011
UGA4	Uga4p	0.010
YLR307C-A	hypothetical protein	0.010
YMR001C-A	hypothetical protein	0.010
YNL277W-A	hypothetical protein	0.010
RGD1	Rgd1p	0.010
RIO2	Rio2p	0.010
ADH6	Adh6p	0.010
YSF3	Ysf3p	0.010
YML007C-A	hypothetical protein	0.010
RAD27	Rad27p	0.010
PYC2	Pyc2p	0.010
YOL114C	hypothetical protein	0.010
YER187W	hypothetical protein	0.010
YER130C	hypothetical protein	0.010
HHT2	Hht2p	0.010
HOP2	Hop2p	0.010
RPL3	Rpl3p	0.010
YMR244W	hypothetical protein	0.010
BIO5	Bio5p	0.010
NFT1	Nft1p	0.010
YOR111W	hypothetical protein	0.010
YHL012W	hypothetical protein	0.010
YJL047C-A	hypothetical protein	0.010
BAT2	Bat2p	0.010
YJL028W	hypothetical protein	0.010
RPL29	Rpl29p	0.010
TPI1	Tpi1p	0.010
YPL168W	hypothetical protein	0.010
YAR028W	hypothetical protein	0.010
ASP3-4	Asp3-4p	0.010
PHO12	Pho12p	0.010
ERV2	Erv2p	0.010
YKL018C-A	hypothetical protein	0.010
YLR278C	hypothetical protein	0.010
YLR283W	hypothetical protein	0.010
IES1	Ies1p	0.010
YOR268C	hypothetical protein	0.010
GIS3	Gis3p	0.010
PRM3	Prm3p	0.010
SOG2	Sog2p	0.010
YAL065C	hypothetical protein	0.010
YHR050W-A	hypothetical protein	0.010
PSY4	Psy4p	0.010
YOL163W	hypothetical protein	0.010
RTS2	Rts2p	0.010
MNN5	Mnn5p	0.010
TRM112	Trm112p	0.010
PIR1	Pir1p	0.010
YJR079W	hypothetical protein	0.010