IMP

Process View

Saccharomyces cerevisiae

29 genes annotated in yeast

sphingolipid biosynthetic process

The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).

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In addition to gene-name show these genes:

Known genes in the process in yeast Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "sphingolipid biosynthetic process"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "sphingolipid biosynthetic process" (in gray)

Name	Description	Probability	Func Analog Organism
LCB2	Lcb2p	0.897
TOR2	Tor2p	0.875	Yeast
LAG1	Lag1p	0.874
TOR1	Tor1p	0.787
LCB1	Lcb1p	0.510
MDS3	Mds3p	0.446
BMH1	Bmh1p	0.400
SCS7	Scs7p	0.320
PTK2	Ptk2p	0.304	Yeast
YPK1	Ypk1p	0.286
TSC3	Tsc3p	0.244
CMK2	Cmk2p	0.235
SLM1	Slm1p	0.232
GSF2	Gsf2p	0.208
LAC1	Lac1p	0.207
VMA11	Vma11p	0.203
CSG2	Csg2p	0.193
IFA38	Ifa38p	0.184
FPK1	Fpk1p	0.157	Yeast
LCB3	Lcb3p	0.152	Yeast
ELO1	Elo1p	0.141
RIM101	Rim101p	0.128
SVP26	Svp26p	0.110
TCO89	Tco89p	0.109
SIA1	Sia1p	0.100
SUR2	Sur2p	0.098
LIP1	Lip1p	0.096
KSP1	Ksp1p	0.092	Yeast
GCS1	Gcs1p	0.085
IPT1	Ipt1p	0.080
YJL193W	hypothetical protein	0.080
SAK1	Sak1p	0.080
NPR1	Npr1p	0.079
YPL260W	hypothetical protein	0.077
YLR257W	hypothetical protein	0.076
TAX4	Tax4p	0.075
SUR1	Sur1p	0.072
IZH3	Izh3p	0.072
PPQ1	Ppq1p	0.071
NUR1	Nur1p	0.070
AVT1	Avt1p	0.069
SSK1	Ssk1p	0.069
ISC1	Isc1p	0.066
RTS1	Rts1p	0.064
YLR177W	hypothetical protein	0.063
PLB2	Plb2p	0.062
FMP48	Fmp48p	0.060
CTR2	Ctr2p	0.060
ERG11	Erg11p	0.059
OSH3	Osh3p	0.058
TOS1	Tos1p	0.058
MBF1	Mbf1p	0.055
LST4	Lst4p	0.052
YLR162W	hypothetical protein	0.050
YPL014W	hypothetical protein	0.050
FKS1	Fks1p	0.049
MRS3	Mrs3p	0.049
AGP1	Agp1p	0.046
YGR016W	hypothetical protein	0.043
PAM1	Pam1p	0.043
GPI2	Gpi2p	0.043
YNL144C	hypothetical protein	0.043
SRD1	Srd1p	0.042
YAR028W	hypothetical protein	0.042
YLR264C-A	hypothetical protein	0.041
SKS1	Sks1p	0.041	Yeast
OST1	Ost1p	0.041
PMC1	Pmc1p	0.041
ATO3	Ato3p	0.041
PMT6	Pmt6p	0.040
AZF1	Azf1p	0.040
VMA16	Vma16p	0.039
ATF2	Atf2p	0.039
LEU2	Leu2p	0.038
CSH1	Csh1p	0.038
PRR2	Prr2p	0.038	Yeast
PSD1	Psd1p	0.037
PHD1	Phd1p	0.037
SHR3	Shr3p	0.037
YOL038C-A	hypothetical protein	0.037
ERD2	Erd2p	0.037
YMR102C	hypothetical protein	0.036
VHR1	Vhr1p	0.035
VHS1	Vhs1p	0.035	Yeast
HAL5	Hal5p	0.035	Yeast
KIN82	Kin82p	0.034	Yeast
YOR390W	hypothetical protein	0.034
YPS1	Yps1p	0.034
OPY1	Opy1p	0.033
SEF1	Sef1p	0.033
MF(ALPHA)2	Mf(alpha)2p	0.033
CHS1	Chs1p	0.033
LDB16	Ldb16p	0.032
YPR063C	hypothetical protein	0.032
HRK1	Hrk1p	0.032	Yeast
SPL2	Spl2p	0.031
YAR068W	hypothetical protein	0.031
RPS14B	Rps14bp	0.031
ARP10	Arp10p	0.031
SPC25	Spc25p	0.031
ORM1	Orm1p	0.031
ROM2	Rom2p	0.030
CDC55	Cdc55p	0.030
GPB2	Gpb2p	0.030
PRO3	Pro3p	0.030
YNR014W	hypothetical protein	0.030
ALE1	Ale1p	0.030
YIL151C	hypothetical protein	0.029
CUP1-1	Cup1-1p	0.029
UPS3	Ups3p	0.029
CNB1	Cnb1p	0.028
URA3	Ura3p	0.028
TOS3	Tos3p	0.028
YNL234W	hypothetical protein	0.028
CPD1	Cpd1p	0.028
RHO5	Rho5p	0.028
OPT2	Opt2p	0.028
FMT1	Fmt1p	0.028
PHO90	Pho90p	0.028
TSC13	Tsc13p	0.028
ARE2	Are2p	0.028
NEO1	Neo1p	0.028
YKR075C	hypothetical protein	0.027
ART10	Art10p	0.027
CHO1	Cho1p	0.027
YER158C	hypothetical protein	0.027
YCH1	Ych1p	0.027
YJL055W	hypothetical protein	0.027
UBP9	Ubp9p	0.027
MRH1	Mrh1p	0.027
ICY1	Icy1p	0.027
FEN1	Fen1p	0.027
AKL1	Akl1p	0.027
YBR235W	hypothetical protein	0.027
MER1	Mer1p	0.027
PKH2	Pkh2p	0.026
MEP2	Mep2p	0.026
FAA2	Faa2p	0.026
MF(ALPHA)1	Mf(alpha)1p	0.026
BIT61	Bit61p	0.026
YIR035C	hypothetical protein	0.025
SRO77	Sro77p	0.025
ERG10	Erg10p	0.025
HPF1	Hpf1p	0.025
TRR1	Trr1p	0.025
HXT3	Hxt3p	0.025
YAR066W	hypothetical protein	0.025
RHO1	Rho1p	0.025
YBR013C	hypothetical protein	0.025
PUF2	Puf2p	0.025
MST27	Mst27p	0.025
YLR042C	hypothetical protein	0.025
YNL134C	hypothetical protein	0.025
DIF1	Dif1p	0.025
ICS2	Ics2p	0.025
NHX1	Nhx1p	0.025
YJR061W	hypothetical protein	0.025
PET8	Pet8p	0.025
AUA1	Aua1p	0.024
ISR1	Isr1p	0.024
GEP5	Gep5p	0.024
SAM2	Sam2p	0.024
PHO88	Pho88p	0.024
ENT2	Ent2p	0.024
ZRC1	Zrc1p	0.024
NRG2	Nrg2p	0.024
ZPS1	Zps1p	0.024
ARO10	Aro10p	0.024
SAC6	Sac6p	0.024
OST6	Ost6p	0.024
IMD2	Imd2p	0.023
YNL190W	hypothetical protein	0.023
ATP6	Atp6p	0.023
SWM2	Swm2p	0.023
RSC6	Rsc6p	0.023
BSC1	Bsc1p	0.023
HUR1	Hur1p	0.023
STE18	Ste18p	0.023
UTR1	Utr1p	0.023
YLR152C	hypothetical protein	0.023
YJR116W	hypothetical protein	0.022
APT2	Apt2p	0.022
RRN5	Rrn5p	0.022
GAB1	Gab1p	0.022
YPR157W	hypothetical protein	0.022
PRS2	Prs2p	0.022
PBP4	Pbp4p	0.022
SAC1	Sac1p	0.022
YER064C	hypothetical protein	0.022
CTR3	Ctr3p	0.022
YJL107C	hypothetical protein	0.022
CRP1	Crp1p	0.022
YJL160C	hypothetical protein	0.021
ARG8	Arg8p	0.021
HYP2	Hyp2p	0.021
URA8	Ura8p	0.021
REX2	Rex2p	0.021
SAR1	Sar1p	0.021
YOL013W-A	hypothetical protein	0.021
REE1	Ree1p	0.021
BIO2	Bio2p	0.021
PCL8	Pcl8p	0.021
PHR1	Phr1p	0.021
ERV2	Erv2p	0.021
YMR086W	hypothetical protein	0.021
TYE7	Tye7p	0.021
YML003W	hypothetical protein	0.021
YBL029W	hypothetical protein	0.021
YEL057C	hypothetical protein	0.021
BDH1	Bdh1p	0.020
YLR108C	hypothetical protein	0.020
BSC2	Bsc2p	0.020
LCL1	Lcl1p	0.020
CTT1	Ctt1p	0.020
YIR014W	hypothetical protein	0.020
SFT1	Sft1p	0.020
FRS2	Frs2p	0.020
FAS1	Fas1p	0.020
RNR2	Rnr2p	0.020
SSP1	Ssp1p	0.020
TAT2	Tat2p	0.020
HO	Hop	0.020
ENA5	Ena5p	0.020
BCK2	Bck2p	0.020
ZRT2	Zrt2p	0.019
PTM1	Ptm1p	0.019
NOP10	Nop10p	0.019
PHM6	Phm6p	0.019
SWC7	Swc7p	0.019
YER152C	hypothetical protein	0.019
SCM4	Scm4p	0.019
YCL021W-A	hypothetical protein	0.019
YLR040C	hypothetical protein	0.019
YAL064W	hypothetical protein	0.019
YAL037C-A	hypothetical protein	0.019
COS111	Cos111p	0.019
LRO1	Lro1p	0.019
AIF1	Aif1p	0.019
SET4	Set4p	0.019
YPR096C	hypothetical protein	0.019
YER039C-A	hypothetical protein	0.019
YGL235W	hypothetical protein	0.019
YJR120W	hypothetical protein	0.018
YKR041W	hypothetical protein	0.018
SIZ1	Siz1p	0.018
ALT2	Alt2p	0.018
RTG1	Rtg1p	0.018
YLR001C	hypothetical protein	0.018
GDT1	Gdt1p	0.018
RCK2	Rck2p	0.018
AQY2	Aqy2p	0.018
CCT6	Cct6p	0.018
SKN1	Skn1p	0.018
NSL1	Nsl1p	0.018
MET8	Met8p	0.018
DUR1,2	Dur1,2p	0.018
SPC1	Spc1p	0.018
APD1	Apd1p	0.018
YPR153W	hypothetical protein	0.018
YJL181W	hypothetical protein	0.017
RNP1	Rnp1p	0.017
YPR114W	hypothetical protein	0.017
SLM2	Slm2p	0.017
YGL006W-A	hypothetical protein	0.017
PKH1	Pkh1p	0.017
SNF11	Snf11p	0.017
YPL279C	hypothetical protein	0.017
PAH1	Pah1p	0.017
KNH1	Knh1p	0.017
FAR3	Far3p	0.017
ANB1	Anb1p	0.017
PMP3	Pmp3p	0.017
BET2	Bet2p	0.017
HCM1	Hcm1p	0.017
YKR045C	hypothetical protein	0.017
ARK1	Ark1p	0.017
ICS3	Ics3p	0.017
TGL4	Tgl4p	0.017
YNL067W-B	hypothetical protein	0.017
YJR115W	hypothetical protein	0.017
DIC1	Dic1p	0.017
DFG10	Dfg10p	0.017
COS12	Cos12p	0.017
GPI8	Gpi8p	0.017
OPT1	Opt1p	0.017
RMA1	Rma1p	0.016
ATG4	Atg4p	0.016
YIR042C	hypothetical protein	0.016
YPR1	Ypr1p	0.016
SCS2	Scs2p	0.016
IZH4	Izh4p	0.016
RAD53	Rad53p	0.016
HAA1	Haa1p	0.016
YPL067C	hypothetical protein	0.016
APJ1	Apj1p	0.016
SRX1	Srx1p	0.016
YOR012W	hypothetical protein	0.016
FAS2	Fas2p	0.016
CYC7	Cyc7p	0.016
YOR385W	hypothetical protein	0.016
STE13	Ste13p	0.016
TBS1	Tbs1p	0.016
SUT1	Sut1p	0.016
TSC10	Tsc10p	0.016
CSR2	Csr2p	0.016
YFR035C	hypothetical protein	0.016
PGS1	Pgs1p	0.016
YPR013C	hypothetical protein	0.016
PSP1	Psp1p	0.016
VHS3	Vhs3p	0.016
ATG15	Atg15p	0.016
SLG1	Slg1p	0.016
TIR4	Tir4p	0.016
RSB1	Rsb1p	0.016
YNL162W-A	hypothetical protein	0.016
YGP1	Ygp1p	0.015
YHR202W	hypothetical protein	0.015
YNL058C	hypothetical protein	0.015
YLR278C	hypothetical protein	0.015
SPO74	Spo74p	0.015
YNL018C	hypothetical protein	0.015
ASP3-4	Asp3-4p	0.015
UGA4	Uga4p	0.015
POG1	Pog1p	0.015
PHO11	Pho11p	0.015
CEP3	Cep3p	0.015
YDR524W-C	hypothetical protein	0.015
PFK27	Pfk27p	0.015
YMR122W-A	hypothetical protein	0.015
SEO1	Seo1p	0.015
YOL087C	hypothetical protein	0.015
YLR422W	hypothetical protein	0.015
YMR317W	hypothetical protein	0.015
TOK1	Tok1p	0.015
PBP1	Pbp1p	0.015
CUE4	Cue4p	0.015
PTR2	Ptr2p	0.015
RRT5	Rrt5p	0.015
YNL033W	hypothetical protein	0.015
YDR034C-A	hypothetical protein	0.015
YOR365C	hypothetical protein	0.015
DOG1	Dog1p	0.015
GAS3	Gas3p	0.015
YDR222W	hypothetical protein	0.015
YGR031W	hypothetical protein	0.015
YJL213W	hypothetical protein	0.015
ICT1	Ict1p	0.015
OYE3	Oye3p	0.015
TIP1	Tip1p	0.015
UGO1	Ugo1p	0.014
YNL295W	hypothetical protein	0.014
TIR3	Tir3p	0.014
YHK8	Yhk8p	0.014
DNF2	Dnf2p	0.014
YGR126W	hypothetical protein	0.014
SSO2	Sso2p	0.014
KKQ8	Kkq8p	0.014	Yeast
YPR159C-A	hypothetical protein	0.014
SCT1	Sct1p	0.014
AAD6	Aad6p	0.014
WTM2	Wtm2p	0.014
BNA4	Bna4p	0.014
YEA4	Yea4p	0.014
YNL034W	hypothetical protein	0.014
YLR412C-A	hypothetical protein	0.014
PHO12	Pho12p	0.014
INP52	Inp52p	0.014
HLJ1	Hlj1p	0.014
FPS1	Fps1p	0.014
YDL129W	hypothetical protein	0.014
YML100W-A	hypothetical protein	0.014
SWI1	Swi1p	0.014
YSR3	Ysr3p	0.014
WSC4	Wsc4p	0.014
ACC1	Acc1p	0.014
SMP3	Smp3p	0.014
YLL054C	hypothetical protein	0.014
YJL118W	hypothetical protein	0.014
DAL80	Dal80p	0.014
YPR027C	hypothetical protein	0.014
MUM3	Mum3p	0.014
FCY22	Fcy22p	0.014
YPL272C	hypothetical protein	0.014
YOR387C	hypothetical protein	0.014
YOL014W	hypothetical protein	0.014
CHA1	Cha1p	0.014
NBL1	Nbl1p	0.014
GTO3	Gto3p	0.014
UTR4	Utr4p	0.014
YNR062C	hypothetical protein	0.014
YCL001W-B	hypothetical protein	0.014
LST8	Lst8p	0.014
KAP104	Kap104p	0.014
YGR205W	hypothetical protein	0.014
YLR342W-A	hypothetical protein	0.014
YCR102C	hypothetical protein	0.014
PSR1	Psr1p	0.014
VRG4	Vrg4p	0.014
YER186C	hypothetical protein	0.013
SPS4	Sps4p	0.013
YKL070W	hypothetical protein	0.013
SPO77	Spo77p	0.013
GIS3	Gis3p	0.013
TIM18	Tim18p	0.013
ERV41	Erv41p	0.013
ASG7	Asg7p	0.013
CTS1	Cts1p	0.013
GLN1	Gln1p	0.013
BUD31	Bud31p	0.013
MPH3	Mph3p	0.013
YLR012C	hypothetical protein	0.013
ROX1	Rox1p	0.013
FUR4	Fur4p	0.013
KOG1	Kog1p	0.013
AAP1	Aap1p	0.013
ARR2	Arr2p	0.013
ENA2	Ena2p	0.013
BAT2	Bat2p	0.013
KSH1	Ksh1p	0.013
APA1	Apa1p	0.013
GYL1	Gyl1p	0.013
COS10	Cos10p	0.013
YGL015C	hypothetical protein	0.013
RTT105	Rtt105p	0.013
LYS9	Lys9p	0.013
YKL106C-A	hypothetical protein	0.013
DCW1	Dcw1p	0.013
ADH7	Adh7p	0.013
VBA5	Vba5p	0.013
URA6	Ura6p	0.013
BIO5	Bio5p	0.013
PCL2	Pcl2p	0.013
YCL042W	hypothetical protein	0.013
RGS2	Rgs2p	0.013
SRT1	Srt1p	0.013
AUR1	Aur1p	0.013
EPT1	Ept1p	0.013
BRN1	Brn1p	0.013
NNK1	Nnk1p	0.013	Yeast
YDL085C-A	hypothetical protein	0.013
ILV5	Ilv5p	0.013
ISU2	Isu2p	0.013
MMP1	Mmp1p	0.013
MKK1	Mkk1p	0.013
MTC7	Mtc7p	0.013
CHS7	Chs7p	0.013
BIO4	Bio4p	0.013
BI4	Bi4p	0.013
YER175W-A	hypothetical protein	0.013
FRE7	Fre7p	0.013
STE3	Ste3p	0.012
AAD15	Aad15p	0.012
MLC1	Mlc1p	0.012
ADH2	Adh2p	0.012
YBR219C	hypothetical protein	0.012
YKE4	Yke4p	0.012
AST1	Ast1p	0.012
YJR015W	hypothetical protein	0.012
COS9	Cos9p	0.012
TIR2	Tir2p	0.012
IMA5	Ima5p	0.012
YDL206W	hypothetical protein	0.012
TUS1	Tus1p	0.012
FLD1	Fld1p	0.012
POR2	Por2p	0.012
RAX1	Rax1p	0.012
FRE5	Fre5p	0.012
YOL097W-A	hypothetical protein	0.012
AVO1	Avo1p	0.012
YJL028W	hypothetical protein	0.012
YNR063W	hypothetical protein	0.012
UBX6	Ubx6p	0.012
HEM3	Hem3p	0.012
ORM2	Orm2p	0.012
HAC1	Hac1p	0.012
GCV1	Gcv1p	0.012
PSP2	Psp2p	0.012
YMR001C-A	hypothetical protein	0.012
PCL9	Pcl9p	0.012
KRE29	Kre29p	0.012
THP3	Thp3p	0.012
YDL012C	hypothetical protein	0.012
SCY1	Scy1p	0.012
MFA2	Mfa2p	0.012
YLR281C	hypothetical protein	0.012
SOR2	Sor2p	0.012
LUC7	Luc7p	0.012
MTC6	Mtc6p	0.012
CAB4	Cab4p	0.012
RAD55	Rad55p	0.012
ZRT1	Zrt1p	0.012
YLR460C	hypothetical protein	0.012
KRE2	Kre2p	0.012
TSC11	Tsc11p	0.012
YFR018C	hypothetical protein	0.012
YNL097C-B	hypothetical protein	0.012
FSH1	Fsh1p	0.012
YDR182W-A	hypothetical protein	0.012
MRK1	Mrk1p	0.012
YBL039W-B	hypothetical protein	0.012
TIF6	Tif6p	0.012
REV1	Rev1p	0.012
PSK1	Psk1p	0.012
MEP1	Mep1p	0.012
YCR023C	hypothetical protein	0.012
YEL043W	hypothetical protein	0.012
CAB2	Cab2p	0.012
AIM38	Aim38p	0.012
AIM3	Aim3p	0.011
YLR406C-A	hypothetical protein	0.011
YER085C	hypothetical protein	0.011
YHR035W	hypothetical protein	0.011
RIM15	Rim15p	0.011
MAM1	Mam1p	0.011
HAL1	Hal1p	0.011
YML053C	hypothetical protein	0.011
YJL047C-A	hypothetical protein	0.011
YCR050C	hypothetical protein	0.011
YAL065C	hypothetical protein	0.011
IME4	Ime4p	0.011
CSF1	Csf1p	0.011
YAL018C	hypothetical protein	0.011
PCM1	Pcm1p	0.011
YKL068W-A	hypothetical protein	0.011
TPN1	Tpn1p	0.011
IMA2	Ima2p	0.011
MIG2	Mig2p	0.011
YBL044W	hypothetical protein	0.011
OLI1	F0-ATP synthase subunit c (ATPase-associated proteolipid), encoded on the mitochondrial genome; mutation confers oligomycin resistance; expression is specifically dependent on the nuclear genes AEP1 and AEP2	0.011
YBR096W	hypothetical protein	0.011
YPR036W-A	hypothetical protein	0.011
YNL146C-A	hypothetical protein	0.011
YER134C	hypothetical protein	0.011
YIL046W-A	hypothetical protein	0.011
PUS2	Pus2p	0.011
SCS3	Scs3p	0.011
YOR302W	hypothetical protein	0.011
YDR056C	hypothetical protein	0.011
AGC1	Agc1p	0.011
DAN1	Dan1p	0.011
PRM4	Prm4p	0.011
HOT13	Hot13p	0.011
MIM1	Mim1p	0.011
YLR297W	hypothetical protein	0.011
YAK1	Yak1p	0.011
HMRA1	Hmra1p	0.011
LHS1	Lhs1p	0.011
YHR177W	hypothetical protein	0.011
YEL073C	hypothetical protein	0.011
ARN2	Arn2p	0.011
VEL1	Vel1p	0.011
YHL012W	hypothetical protein	0.011
ALG9	Alg9p	0.011
DNF3	Dnf3p	0.011
BCK1	Bck1p	0.011
MMS21	Mms21p	0.011
PIC2	Pic2p	0.011
YLR307C-A	hypothetical protein	0.011
YOL086W-A	hypothetical protein	0.011
GRX8	Grx8p	0.011
YAL037W	hypothetical protein	0.011
SAC7	Sac7p	0.011
BDS1	Bds1p	0.011
YNL277W-A	hypothetical protein	0.011
FRT1	Frt1p	0.011
VPS55	Vps55p	0.011
HES1	Hes1p	0.011
TIS11	Tis11p	0.011
AAD4	Aad4p	0.011
GTT3	Gtt3p	0.011
IZH2	Izh2p	0.011
ADH4	Adh4p	0.011
YHR050W-A	hypothetical protein	0.011
SPO19	Spo19p	0.011
FRM2	Frm2p	0.010
CAM1	Cam1p	0.010
TEN1	Ten1p	0.010
NFT1	Nft1p	0.010
GAL80	Gal80p	0.010
YDR387C	hypothetical protein	0.010
YPT35	Ypt35p	0.010
ERG5	Erg5p	0.010
YPL152W-A	hypothetical protein	0.010
TVP38	Tvp38p	0.010
YHR097C	hypothetical protein	0.010
IGO1	Igo1p	0.010
YDR541C	hypothetical protein	0.010
NVJ1	Nvj1p	0.010
YBR296C-A	hypothetical protein	0.010
CMP2	Cmp2p	0.010
CAX4	Cax4p	0.010
YKL023W	hypothetical protein	0.010
RPI1	Rpi1p	0.010
CWP1	Cwp1p	0.010
DAK2	Dak2p	0.010
RMD6	Rmd6p	0.010
YOL114C	hypothetical protein	0.010
YPR108W-A	hypothetical protein	0.010
NRG1	Nrg1p	0.010
CNE1	Cne1p	0.010
KTR1	Ktr1p	0.010
RTS2	Rts2p	0.010
ANS1	Ans1p	0.010
YIL089W	hypothetical protein	0.010
YDR042C	hypothetical protein	0.010
RME1	Rme1p	0.010
GPI11	Gpi11p	0.010
REG2	Reg2p	0.010
PDE2	Pde2p	0.010