IMP
Process View
transcription dependent tethering of rna polymerase ii gene dna at nuclear periphery
The chromosome organization process in which the DNA sequence containing a gene transcribed by RNA polymerase II is maintained in a specific location at the nuclear periphery. In S. cerevisiae, this process involves cis-acting DNA sequences such as the TATA box and upstream activating sequence (UAS) elements, trans-acting transcriptional activators, and also the 3'-UTR of the transcript.
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In addition to gene-name show these genes:
Click on a gene's description to view its network relationships with genes known to be involved in "transcription dependent tethering of rna polymerase ii gene dna at nuclear periphery"
| Name | Description | Probability | Func Analog Organism | |
|---|---|---|---|---|
| NUP145 | Nup145p | 0.837 | ||
| NUP60 | Nup60p | 0.828 | ||
| NUP120 | Nup120p | 0.786 | ||
| MEX67 | Mex67p | 0.610 | ||
| NUP159 | Nup159p | 0.587 | ||
| SAC3 | Sac3p | 0.550 | ||
| NUP133 | Nup133p | 0.530 | ||
| NUP116 | Nup116p | 0.512 | ||
| NUP82 | Nup82p | 0.363 | ||
| NSP1 | Nsp1p | 0.319 | ||
| GLE1 | Gle1p | 0.292 | ||
| NUP170 | Nup170p | 0.284 | ||
| NUP157 | Nup157p | 0.245 | ||
| MLP1 | Mlp1p | 0.199 | ||
| NUP100 | Nup100p | 0.175 | ||
| RRP6 | Rrp6p | 0.160 | ||
| POM152 | Pom152p | 0.150 | ||
| SUS1 | Sus1p | 0.143 | ||
| NUP85 | Nup85p | 0.128 | ||
| NUP188 | Nup188p | 0.118 | ||
| TAF8 | Taf8p | 0.101 | ||
| DIS3 | Dis3p | 0.075 | ||
| NUP49 | Nup49p | 0.064 | ||
| NUP53 | Nup53p | 0.064 | ||
| NIC96 | Nic96p | 0.062 | ||
| MMS1 | Mms1p | 0.055 | ||
| NUP84 | Nup84p | 0.047 | ||
| THP2 | Thp2p | 0.045 | ||
| SPC110 | Spc110p | 0.045 | ||
| NUP1 | Nup1p | 0.042 | ||
| YLR264C-A | hypothetical protein | 0.039 | ||
| SRD1 | Srd1p | 0.039 | ||
| ADA2 | Ada2p | 0.039 | ||
| MAD1 | Mad1p | 0.038 | ||
| CUP1-1 | Cup1-1p | 0.035 | ||
| LEU2 | Leu2p | 0.035 | ||
| YAR068W | hypothetical protein | 0.034 | ||
| ARG8 | Arg8p | 0.034 | ||
| MLP2 | Mlp2p | 0.033 | ||
| SPL2 | Spl2p | 0.033 | ||
| HO | Hop | 0.031 | ||
| YLR162W | hypothetical protein | 0.030 | ||
| SWT1 | Swt1p | 0.030 | ||
| YOL038C-A | hypothetical protein | 0.030 | ||
| MER1 | Mer1p | 0.029 | ||
| YIR035C | hypothetical protein | 0.028 | ||
| SCY1 | Scy1p | 0.028 | ||
| ARP10 | Arp10p | 0.028 | ||
| YLR042C | hypothetical protein | 0.027 | ||
| SRP72 | Srp72p | 0.027 | ||
| URA3 | Ura3p | 0.026 | ||
| TRA1 | Tra1p | 0.025 | ||
| MAK10 | Mak10p | 0.024 | ||
| GEA2 | Gea2p | 0.024 | ||
| SWC7 | Swc7p | 0.024 | ||
| UBP8 | Ubp8p | 0.024 | ||
| ATP6 | Atp6p | 0.024 | ||
| YPR157W | hypothetical protein | 0.024 | ||
| YAR066W | hypothetical protein | 0.023 | ||
| YMR259C | hypothetical protein | 0.023 | ||
| ZPS1 | Zps1p | 0.022 | ||
| PRS2 | Prs2p | 0.022 | ||
| AQY2 | Aqy2p | 0.022 | ||
| HXT3 | Hxt3p | 0.021 | ||
| AUA1 | Aua1p | 0.021 | ||
| KAP120 | Kap120p | 0.020 | ||
| NOP10 | Nop10p | 0.020 | ||
| YOL013W-A | hypothetical protein | 0.020 | ||
| BSC1 | Bsc1p | 0.020 | ||
| IZH4 | Izh4p | 0.020 | ||
| HPF1 | Hpf1p | 0.020 | ||
| CHA1 | Cha1p | 0.020 | ||
| AAT1 | Aat1p | 0.019 | ||
| MF(ALPHA)2 | Mf(alpha)2p | 0.019 | ||
| FMT1 | Fmt1p | 0.019 | ||
| SCC4 | Scc4p | 0.019 | ||
| YBR013C | hypothetical protein | 0.019 | ||
| DAL81 | Dal81p | 0.019 | ||
| YHL026C | hypothetical protein | 0.017 | ||
| ADH2 | Adh2p | 0.017 | ||
| SEH1 | Seh1p | 0.017 | ||
| SCM4 | Scm4p | 0.017 | ||
| TOP1 | Top1p | 0.017 | ||
| TIP1 | Tip1p | 0.017 | ||
| OPT2 | Opt2p | 0.017 | ||
| PHM6 | Phm6p | 0.017 | ||
| YAL037C-A | hypothetical protein | 0.017 | ||
| YLL053C | hypothetical protein | 0.017 | ||
| RIO1 | Rio1p | 0.017 | ||
| HFI1 | Hfi1p | 0.017 | ||
| YLR040C | hypothetical protein | 0.016 | ||
| CPD1 | Cpd1p | 0.016 | ||
| CAR1 | Car1p | 0.016 | ||
| DIC1 | Dic1p | 0.016 | ||
| RSA1 | Rsa1p | 0.016 | ||
| UPS3 | Ups3p | 0.016 | ||
| BNA4 | Bna4p | 0.016 | ||
| YJL181W | hypothetical protein | 0.016 | ||
| WSS1 | Wss1p | 0.016 | ||
| TSC3 | Tsc3p | 0.016 | ||
| PAP2 | Pap2p | 0.016 | ||
| COS12 | Cos12p | 0.016 | ||
| YGR035C | hypothetical protein | 0.016 | ||
| YAL064W | hypothetical protein | 0.016 | ||
| CUP1-2 | Cup1-2p | 0.015 | ||
| MF(ALPHA)1 | Mf(alpha)1p | 0.015 | ||
| FCP1 | Fcp1p | 0.015 | ||
| MFA2 | Mfa2p | 0.015 | ||
| YPR096C | hypothetical protein | 0.015 | ||
| ALT2 | Alt2p | 0.015 | ||
| CRP1 | Crp1p | 0.015 | ||
| SEN1 | Sen1p | 0.015 | ||
| NUP2 | Nup2p | 0.015 | ||
| YIL151C | hypothetical protein | 0.015 | ||
| RNP1 | Rnp1p | 0.015 | ||
| MMP1 | Mmp1p | 0.015 | ||
| YBL029W | hypothetical protein | 0.014 | ||
| YNL234W | hypothetical protein | 0.014 | ||
| ENA5 | Ena5p | 0.014 | ||
| SEM1 | Sem1p | 0.014 | ||
| YJL160C | hypothetical protein | 0.014 | ||
| YGL006W-A | hypothetical protein | 0.014 | ||
| REV1 | Rev1p | 0.014 | ||
| CCH1 | Cch1p | 0.014 | ||
| YPL067C | hypothetical protein | 0.014 | ||
| PCT1 | Pct1p | 0.014 | ||
| RRT5 | Rrt5p | 0.014 | ||
| RTT107 | Rtt107p | 0.014 | ||
| YNL067W-B | hypothetical protein | 0.014 | ||
| MTR2 | Mtr2p | 0.014 | ||
| BIO2 | Bio2p | 0.014 | ||
| DSE3 | Dse3p | 0.014 | ||
| RRN5 | Rrn5p | 0.014 | ||
| YCH1 | Ych1p | 0.014 | ||
| MET8 | Met8p | 0.013 | ||
| ATO3 | Ato3p | 0.013 | ||
| PTR2 | Ptr2p | 0.013 | ||
| PCL9 | Pcl9p | 0.013 | ||
| NRG2 | Nrg2p | 0.013 | ||
| YMR317W | hypothetical protein | 0.013 | ||
| YGL235W | hypothetical protein | 0.013 | ||
| SPS4 | Sps4p | 0.013 | ||
| YOL014W | hypothetical protein | 0.013 | ||
| SUT1 | Sut1p | 0.013 | ||
| YML100W-A | hypothetical protein | 0.013 | ||
| TIR3 | Tir3p | 0.013 | ||
| JJJ1 | Jjj1p | 0.013 | ||
| DIF1 | Dif1p | 0.013 | ||
| ARR2 | Arr2p | 0.013 | ||
| STU1 | Stu1p | 0.013 | ||
| REE1 | Ree1p | 0.013 | ||
| MIG2 | Mig2p | 0.013 | ||
| YNL033W | hypothetical protein | 0.013 | ||
| FCY22 | Fcy22p | 0.013 | ||
| YLR419W | hypothetical protein | 0.013 | ||
| SSP1 | Ssp1p | 0.013 | ||
| HST3 | Hst3p | 0.013 | ||
| YDR034C-A | hypothetical protein | 0.013 | ||
| YJL107C | hypothetical protein | 0.013 | ||
| HOR2 | Hor2p | 0.013 | ||
| YNR062C | hypothetical protein | 0.013 | ||
| YPR027C | hypothetical protein | 0.012 | ||
| SIT1 | Sit1p | 0.012 | ||
| DUR1,2 | Dur1,2p | 0.012 | ||
| TYE7 | Tye7p | 0.012 | ||
| BDS1 | Bds1p | 0.012 | ||
| YJL218W | hypothetical protein | 0.012 | ||
| PTP3 | Ptp3p | 0.012 | ||
| ENB1 | Enb1p | 0.012 | ||
| YML003W | hypothetical protein | 0.012 | ||
| YDR524W-C | hypothetical protein | 0.012 | ||
| RIB2 | Rib2p | 0.012 | ||
| YLR412C-A | hypothetical protein | 0.012 | ||
| PTI1 | Pti1p | 0.012 | ||
| YNL018C | hypothetical protein | 0.012 | ||
| BI4 | Bi4p | 0.012 | ||
| YBL044W | hypothetical protein | 0.012 | ||
| YNR063W | hypothetical protein | 0.012 | ||
| SET4 | Set4p | 0.012 | ||
| PSR1 | Psr1p | 0.012 | ||
| YCR102C | hypothetical protein | 0.012 | ||
| YKR041W | hypothetical protein | 0.012 | ||
| LRO1 | Lro1p | 0.012 | ||
| YNL058C | hypothetical protein | 0.012 | ||
| YHR035W | hypothetical protein | 0.012 | ||
| SAM3 | Sam3p | 0.012 | ||
| YNL162W-A | hypothetical protein | 0.012 | ||
| YIR042C | hypothetical protein | 0.012 | ||
| POP6 | Pop6p | 0.012 | ||
| YKR075C | hypothetical protein | 0.012 | ||
| YGL015C | hypothetical protein | 0.012 | ||
| GLT1 | Glt1p | 0.012 | ||
| YDR222W | hypothetical protein | 0.012 | ||
| YJR120W | hypothetical protein | 0.011 | ||
| MUM3 | Mum3p | 0.011 | ||
| TRM44 | Trm44p | 0.011 | ||
| YPL216W | hypothetical protein | 0.011 | ||
| YLR342W-A | hypothetical protein | 0.011 | ||
| NUP42 | Nup42p | 0.011 | ||
| GBP2 | Gbp2p | 0.011 | ||
| SWM2 | Swm2p | 0.011 | ||
| IKI1 | Iki1p | 0.011 | ||
| BIO5 | Bio5p | 0.011 | ||
| ASG1 | Asg1p | 0.011 | ||
| YOR387C | hypothetical protein | 0.011 | ||
| LCL1 | Lcl1p | 0.011 | ||
| GLN1 | Gln1p | 0.011 | ||
| YBR296C-A | hypothetical protein | 0.011 | ||
| YBR219C | hypothetical protein | 0.011 | ||
| TPN1 | Tpn1p | 0.011 | ||
| YOL029C | hypothetical protein | 0.011 | ||
| ATR1 | Atr1p | 0.011 | ||
| BRN1 | Brn1p | 0.011 | ||
| RSN1 | Rsn1p | 0.011 | ||
| ARO10 | Aro10p | 0.011 | ||
| WSC4 | Wsc4p | 0.011 | ||
| YNL034W | hypothetical protein | 0.011 | ||
| VBA5 | Vba5p | 0.011 | ||
| NUP57 | Nup57p | 0.011 | ||
| KRE29 | Kre29p | 0.011 | ||
| GYL1 | Gyl1p | 0.011 | ||
| RRM3 | Rrm3p | 0.011 | ||
| YOR012W | hypothetical protein | 0.011 | ||
| YHK8 | Yhk8p | 0.011 | ||
| KNH1 | Knh1p | 0.011 | ||
| FCY21 | Fcy21p | 0.011 | ||
| YOR365C | hypothetical protein | 0.011 | ||
| HEM3 | Hem3p | 0.011 | ||
| YFR035C | hypothetical protein | 0.011 | ||
| ICS3 | Ics3p | 0.011 | ||
| RNA14 | Rna14p | 0.010 | ||
| SEO1 | Seo1p | 0.010 | ||
| YSR3 | Ysr3p | 0.010 | ||
| YER064C | hypothetical protein | 0.010 | ||
| ZRT1 | Zrt1p | 0.010 | ||
| IRC5 | Irc5p | 0.010 | ||
| SPO19 | Spo19p | 0.010 | ||
| CTR3 | Ctr3p | 0.010 | ||
| YLR460C | hypothetical protein | 0.010 | ||
| YMR122W-A | hypothetical protein | 0.010 | ||
| YER085C | hypothetical protein | 0.010 | ||
| TRI1 | Tri1p | 0.010 | ||
| YCL021W-A | hypothetical protein | 0.010 | ||
| YCL001W-B | hypothetical protein | 0.010 | ||
| SOR2 | Sor2p | 0.010 | ||
| CAB2 | Cab2p | 0.010 | ||
| YKL106C-A | hypothetical protein | 0.010 | ||
| VIK1 | Vik1p | 0.010 | ||
| PHO11 | Pho11p | 0.010 | ||
| SIR2 | Sir2p | 0.010 | ||
| YER175W-A | hypothetical protein | 0.010 | ||
| DEG1 | Deg1p | 0.010 | ||
| SPO74 | Spo74p | 0.010 |