IMP

Process View

Saccharomyces cerevisiae

19 genes annotated in yeast

regulation of transcription initiation from rna polymerase ii promoter

Any process that modulates the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.

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Known genes in the process in yeast Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "regulation of transcription initiation from rna polymerase ii promoter"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "regulation of transcription initiation from rna polymerase ii promoter" (in gray)

Name	Description	Probability	Func Analog Organism
SPT16	Spt16p	0.984
SPT5	Spt5p	0.868
RPT6	Rpt6p	0.409
TAF5	Taf5p	0.408
TAF6	Taf6p	0.381
RPT2	Rpt2p	0.365
RPN1	Rpn1p	0.362
TAF12	Taf12p	0.335
CTR9	Ctr9p	0.299
CHD1	Chd1p	0.292
TAF10	Taf10p	0.276
RTF1	Rtf1p	0.275
RPT5	Rpt5p	0.241
NGG1	Ngg1p	0.234
RPN2	Rpn2p	0.193
SPT6	Spt6p	0.187
LEO1	Leo1p	0.174
TFG1	Tfg1p	0.174
MOT1	Mot1p	0.172
RSC4	Rsc4p	0.163
SPT8	Spt8p	0.145
RPT1	Rpt1p	0.139
SUS1	Sus1p	0.131
TRA1	Tra1p	0.120
TFG2	Tfg2p	0.120
SEM1	Sem1p	0.119
SET2	Set2p	0.101
TAF4	Taf4p	0.097
RPN9	Rpn9p	0.094
RPN6	Rpn6p	0.091
RAD23	Rad23p	0.084
TAF8	Taf8p	0.079
ADA2	Ada2p	0.076
RPN7	Rpn7p	0.065
SKI3	Ski3p	0.061
RPT4	Rpt4p	0.059
TIF4632	Tif4632p	0.058
RPT3	Rpt3p	0.052
SPT7	Spt7p	0.050
HDA2	Hda2p	0.048
INO80	Ino80p	0.043
SPN1	Spn1p	0.042
TAF7	Taf7p	0.039
RPN3	Rpn3p	0.038
ISW1	Isw1p	0.038
HHT1	Hht1p	0.038
RPO21	Rpo21p	0.037
TFA1	Tfa1p	0.037
BUR6	Bur6p	0.036
SRD1	Srd1p	0.036
SWI1	Swi1p	0.035
RSC8	Rsc8p	0.034
TAF9	Taf9p	0.034
WWM1	Wwm1p	0.034
RPN13	Rpn13p	0.033
CKA1	Cka1p	0.033
YLR264C-A	hypothetical protein	0.033
LEU2	Leu2p	0.031
POB3	Pob3p	0.031
YLR162W	hypothetical protein	0.030
YIL151C	hypothetical protein	0.029
REB1	Reb1p	0.029
YOL038C-A	hypothetical protein	0.028
HXT3	Hxt3p	0.028
STH1	Sth1p	0.027
ARG8	Arg8p	0.027
MER1	Mer1p	0.026
SPT20	Spt20p	0.026
DLS1	Dls1p	0.026
IOC4	Ioc4p	0.026
TAE2	Tae2p	0.026
ARP10	Arp10p	0.026
YPR157W	hypothetical protein	0.025
RPN10	Rpn10p	0.024
URA3	Ura3p	0.024
YGR017W	hypothetical protein	0.024
HO	Hop	0.024
ECM29	Ecm29p	0.024
YAR068W	hypothetical protein	0.024
CHA1	Cha1p	0.024
PRS2	Prs2p	0.023
YLR042C	hypothetical protein	0.023
ATP6	Atp6p	0.023
HPF1	Hpf1p	0.022
CUP1-1	Cup1-1p	0.022
SPL2	Spl2p	0.022
IOC2	Ioc2p	0.022
SWC7	Swc7p	0.022
NUP49	Nup49p	0.021
UFO1	Ufo1p	0.021
AUA1	Aua1p	0.021
AQY2	Aqy2p	0.021
TAF3	Taf3p	0.021
FMT1	Fmt1p	0.020
YBR013C	hypothetical protein	0.020
SCM4	Scm4p	0.020
YOL013W-A	hypothetical protein	0.020
ADH2	Adh2p	0.020
SUA7	Sua7p	0.020
SCD6	Scd6p	0.019
IZH4	Izh4p	0.019
TIP1	Tip1p	0.019
SPT15	Spt15p	0.019	Fly
BSC1	Bsc1p	0.019
ZPS1	Zps1p	0.019
TAF11	Taf11p	0.018
SCC2	Scc2p	0.018
CKB1	Ckb1p	0.018
YNL155W	hypothetical protein	0.018
YLR040C	hypothetical protein	0.018
BAT2	Bat2p	0.018
OPT2	Opt2p	0.018
YIR035C	hypothetical protein	0.018
CAB3	Cab3p	0.018
TYE7	Tye7p	0.018
YLR363W-A	hypothetical protein	0.018
MF(ALPHA)2	Mf(alpha)2p	0.017
IOC3	Ioc3p	0.017
YKR075C	hypothetical protein	0.017
UPS3	Ups3p	0.017
YAL037C-A	hypothetical protein	0.017
DIC1	Dic1p	0.017
CRP1	Crp1p	0.017
PRE6	Pre6p	0.017
MFA2	Mfa2p	0.017
YLL053C	hypothetical protein	0.017
ALT2	Alt2p	0.017
YCF1	Ycf1p	0.017
SGT2	Sgt2p	0.017
NRG2	Nrg2p	0.016
PUP1	Pup1p	0.016
YPR096C	hypothetical protein	0.016
DCP1	Dcp1p	0.016
BNA4	Bna4p	0.016
TIR3	Tir3p	0.016
YAL064W	hypothetical protein	0.016
ARR2	Arr2p	0.016
CDC3	Cdc3p	0.016
PAF1	Paf1p	0.016
MET8	Met8p	0.016
YAR066W	hypothetical protein	0.016
COS12	Cos12p	0.016
CPD1	Cpd1p	0.016
PTI1	Pti1p	0.016
YLR419W	hypothetical protein	0.016
REE1	Ree1p	0.016
YDR222W	hypothetical protein	0.015
DUR1,2	Dur1,2p	0.015
YMR317W	hypothetical protein	0.015
MF(ALPHA)1	Mf(alpha)1p	0.015
YNL067W-B	hypothetical protein	0.015
PUP3	Pup3p	0.015
RNP1	Rnp1p	0.015
RRT5	Rrt5p	0.015
ZEO1	Zeo1p	0.015
CDC48	Cdc48p	0.015
NAB3	Nab3p	0.015
YGL006W-A	hypothetical protein	0.015
SCY1	Scy1p	0.015
YPL067C	hypothetical protein	0.015
YJL160C	hypothetical protein	0.015
SFT1	Sft1p	0.015
RFA1	Rfa1p	0.015
PTR2	Ptr2p	0.015
YLR412C-A	hypothetical protein	0.014
REV1	Rev1p	0.014
YPR027C	hypothetical protein	0.014
BIO2	Bio2p	0.014
PRI1	Pri1p	0.014
GLT1	Glt1p	0.014
SRP72	Srp72p	0.014
GEA2	Gea2p	0.014
MLP2	Mlp2p	0.014
YDR034C-A	hypothetical protein	0.014
YGR035C	hypothetical protein	0.014
MMP1	Mmp1p	0.014
ENA5	Ena5p	0.014
RRN5	Rrn5p	0.014
SAP190	Sap190p	0.014
YJL181W	hypothetical protein	0.014
TSC3	Tsc3p	0.014
YNL162W-A	hypothetical protein	0.014
PRE2	Pre2p	0.014
YJL107C	hypothetical protein	0.014
TAF2	Taf2p	0.014
YNL033W	hypothetical protein	0.013
YBL029W	hypothetical protein	0.013
YNR062C	hypothetical protein	0.013
SPP41	Spp41p	0.013
YNL018C	hypothetical protein	0.013
YKR041W	hypothetical protein	0.013
YML100W-A	hypothetical protein	0.013
RNH70	Rnh70p	0.013
YOR365C	hypothetical protein	0.013
YDL012C	hypothetical protein	0.013
YML003W	hypothetical protein	0.013
PZF1	Pzf1p	0.013
GPD2	Gpd2p	0.013
PDR16	Pdr16p	0.013
SRO77	Sro77p	0.013
PHM6	Phm6p	0.013
YGL235W	hypothetical protein	0.013
YJR120W	hypothetical protein	0.013
PTP3	Ptp3p	0.013
ATR1	Atr1p	0.013
PCT1	Pct1p	0.013
YNR063W	hypothetical protein	0.013
ORC6	Orc6p	0.013
LCL1	Lcl1p	0.013
RNR2	Rnr2p	0.013
CTS1	Cts1p	0.013
DIF1	Dif1p	0.013
YCR102C	hypothetical protein	0.013
SPS4	Sps4p	0.013
YJL218W	hypothetical protein	0.013
ARO10	Aro10p	0.013
TAF1	Taf1p	0.013
BI4	Bi4p	0.013
YHR035W	hypothetical protein	0.013
YOR012W	hypothetical protein	0.013
SEN54	Sen54p	0.013
PBP1	Pbp1p	0.013
KSH1	Ksh1p	0.013
DOG1	Dog1p	0.013
SET4	Set4p	0.013
VBA5	Vba5p	0.012
WSC4	Wsc4p	0.012
YCL001W-B	hypothetical protein	0.012
YLR342W-A	hypothetical protein	0.012
YNL058C	hypothetical protein	0.012
SEO1	Seo1p	0.012
SAM3	Sam3p	0.012
FCY22	Fcy22p	0.012
MUM3	Mum3p	0.012
SSP1	Ssp1p	0.012
YCH1	Ych1p	0.012
YHK8	Yhk8p	0.012
YMR122W-A	hypothetical protein	0.012
KNH1	Knh1p	0.012
AAP1	Aap1p	0.012
YNL034W	hypothetical protein	0.012
AAD15	Aad15p	0.012
YLR126C	hypothetical protein	0.012
YBL044W	hypothetical protein	0.012
ZRT1	Zrt1p	0.012
SUT1	Sut1p	0.012
YDL085C-A	hypothetical protein	0.012
BDS1	Bds1p	0.012
YER175W-A	hypothetical protein	0.012
TAD2	Tad2p	0.012
PCL9	Pcl9p	0.012
ESC8	Esc8p	0.012
ICS3	Ics3p	0.012
GCR1	Gcr1p	0.012
BIO4	Bio4p	0.012
YML053C	hypothetical protein	0.012
HOR2	Hor2p	0.012
CAB2	Cab2p	0.012
BIO5	Bio5p	0.011
YIR042C	hypothetical protein	0.011
YKL106C-A	hypothetical protein	0.011
YPR159C-A	hypothetical protein	0.011
RTS2	Rts2p	0.011
YOR387C	hypothetical protein	0.011
FRE4	Fre4p	0.011
SIT1	Sit1p	0.011
CAB1	Cab1p	0.011
RIF1	Rif1p	0.011
IES1	Ies1p	0.011
FCY21	Fcy21p	0.011
SPO74	Spo74p	0.011
AIF1	Aif1p	0.011
YGR126W	hypothetical protein	0.011
YFR035C	hypothetical protein	0.011
PCM1	Pcm1p	0.011
YLR278C	hypothetical protein	0.011
YGL015C	hypothetical protein	0.011
YER186C	hypothetical protein	0.011
YOR302W	hypothetical protein	0.011
YOR316C-A	hypothetical protein	0.011
YKL068W-A	hypothetical protein	0.011
MIG2	Mig2p	0.011
YPL216W	hypothetical protein	0.011
CTR3	Ctr3p	0.011
YKL070W	hypothetical protein	0.011
YNL234W	hypothetical protein	0.011
SPO77	Spo77p	0.011
YER085C	hypothetical protein	0.011
ENB1	Enb1p	0.011
PHO12	Pho12p	0.011
YOL014W	hypothetical protein	0.011
YDR524W-C	hypothetical protein	0.011
YLR460C	hypothetical protein	0.011
YLR012C	hypothetical protein	0.011
YJL028W	hypothetical protein	0.011
YOR268C	hypothetical protein	0.011
YNL097C-B	hypothetical protein	0.011
PFS1	Pfs1p	0.011
KRE29	Kre29p	0.010
YSR3	Ysr3p	0.010
YDR182W-A	hypothetical protein	0.010
STU1	Stu1p	0.010
YGR169C-A	hypothetical protein	0.010
YCL021W-A	hypothetical protein	0.010
YER064C	hypothetical protein	0.010
UBP8	Ubp8p	0.010
TIR4	Tir4p	0.010
SPO19	Spo19p	0.010
YOL086W-A	hypothetical protein	0.010
GLN1	Gln1p	0.010
YOL097W-A	hypothetical protein	0.010
YJL213W	hypothetical protein	0.010
FIT2	Fit2p	0.010
SEN1	Sen1p	0.010
YLR406C-A	hypothetical protein	0.010
ECM22	Ecm22p	0.010
SRT1	Srt1p	0.010
YPR108W-A	hypothetical protein	0.010
YFL051C	hypothetical protein	0.010