IMP

Process View

Saccharomyces cerevisiae

35 genes annotated in yeast

chromatin assembly

The assembly of DNA, histone proteins, other associated proteins, and sometimes RNA, into chromatin structure, beginning with the formation of the basic unit, the nucleosome, followed by organization of the nucleosomes into higher order structures, ultimately giving rise to a complex organization of specific domains within the nucleus.

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In addition to gene-name show these genes:

Known genes in the process in yeast Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "chromatin assembly"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "chromatin assembly" (in gray)

Name	Description	Probability	Func Analog Organism
HHT1	Hht1p	1.000	Human
HIR1	Hir1p	0.985
RLF2	Rlf2p	0.978
RTT106	Rtt106p	0.959
HHF2	Hhf2p	0.958	Human Fly
HIR2	Hir2p	0.933
HHT2	Hht2p	0.929	Human
HHF1	Hhf1p	0.904	Human Fly
ASF1	Asf1p	0.874
CAC2	Cac2p	0.839
RSC8	Rsc8p	0.808
SPT16	Spt16p	0.698
SWI1	Swi1p	0.692
RSC2	Rsc2p	0.658
HIF1	Hif1p	0.640
STH1	Sth1p	0.626
HPC2	Hpc2p	0.620
RSC4	Rsc4p	0.513
HTA2	Hta2p	0.470	Human
ISW1	Isw1p	0.462
HTB2	Htb2p	0.457
YTA7	Yta7p	0.451	Worm
HTA1	Hta1p	0.441	Human
BDF1	Bdf1p	0.431
HIR3	Hir3p	0.376
ITC1	Itc1p	0.352
CKA1	Cka1p	0.338
HHO1	Hho1p	0.335	Mouse
RSC6	Rsc6p	0.311
HTB1	Htb1p	0.296
MSI1	Msi1p	0.284
NPL6	Npl6p	0.241
ARP8	Arp8p	0.230
CHD1	Chd1p	0.213
POB3	Pob3p	0.205
ESF1	Esf1p	0.202
SPT10	Spt10p	0.160
ARP4	Arp4p	0.156
BDF2	Bdf2p	0.152
SET2	Set2p	0.148
MMS22	Mms22p	0.123
RSC30	Rsc30p	0.121
NUP170	Nup170p	0.117
SNF5	Snf5p	0.115
RSC9	Rsc9p	0.103
TAF5	Taf5p	0.102
FKH1	Fkh1p	0.101
SIR2	Sir2p	0.098
RTT109	Rtt109p	0.098
HAT2	Hat2p	0.096	Human Yeast Fly
HTZ1	Htz1p	0.096
APC2	Apc2p	0.095
NHP6A	Nhp6ap	0.094
SPT8	Spt8p	0.091
YNG1	Yng1p	0.075
IES3	Ies3p	0.074
FPR4	Fpr4p	0.066
SAS3	Sas3p	0.066
MDN1	Mdn1p	0.065
HAT1	Hat1p	0.061	Human
MND2	Mnd2p	0.060
IES1	Ies1p	0.060
PSH1	Psh1p	0.058
VPS75	Vps75p	0.057
ARP7	Arp7p	0.054
DOT1	Dot1p	0.053
IOC2	Ioc2p	0.052
INO80	Ino80p	0.052
YLR419W	hypothetical protein	0.051
YIL151C	hypothetical protein	0.050
DOC1	Doc1p	0.049
ARP9	Arp9p	0.047
MCM4	Mcm4p	0.047
SPT6	Spt6p	0.045
RCO1	Rco1p	0.044
REB1	Reb1p	0.044
RAD16	Rad16p	0.044
SWM1	Swm1p	0.042
APC1	Apc1p	0.041
CKB1	Ckb1p	0.040
MYO1	Myo1p	0.039
CRP1	Crp1p	0.039
HOT1	Hot1p	0.039
DIA2	Dia2p	0.039
YIR035C	hypothetical protein	0.038
TEL1	Tel1p	0.038
GCN20	Gcn20p	0.038
CDC26	Cdc26p	0.038
IML1	Iml1p	0.038
HOS2	Hos2p	0.037
NUP188	Nup188p	0.037
YLR264C-A	hypothetical protein	0.036
PGD1	Pgd1p	0.035
PTI1	Pti1p	0.035
SRD1	Srd1p	0.033
HXT3	Hxt3p	0.032
SFH1	Sfh1p	0.032
RTT102	Rtt102p	0.032
PSY4	Psy4p	0.032
ORC2	Orc2p	0.031
RAD9	Rad9p	0.031
ILS1	Ils1p	0.031
MOT1	Mot1p	0.031
LEU2	Leu2p	0.030
YLR162W	hypothetical protein	0.030
IES6	Ies6p	0.030
SPT2	Spt2p	0.030
GLT1	Glt1p	0.030
FAA3	Faa3p	0.030
YLR278C	hypothetical protein	0.029
RAD59	Rad59p	0.029
IOC3	Ioc3p	0.029
RAP1	Rap1p	0.029
MNN2	Mnn2p	0.029
PTP3	Ptp3p	0.028
LEO1	Leo1p	0.028
YOL038C-A	hypothetical protein	0.028
SFL1	Sfl1p	0.027
ORC4	Orc4p	0.027
NSA1	Nsa1p	0.027
NUP157	Nup157p	0.027
ARP10	Arp10p	0.027
YCL021W-A	hypothetical protein	0.026
YNL234W	hypothetical protein	0.026
YBL104C	hypothetical protein	0.026
YPL068C	hypothetical protein	0.026
MER1	Mer1p	0.026
PIB2	Pib2p	0.026
SWR1	Swr1p	0.026
RFX1	Rfx1p	0.025
FMT1	Fmt1p	0.025
YAR068W	hypothetical protein	0.025
YLR042C	hypothetical protein	0.024
PRS2	Prs2p	0.024
TEC1	Tec1p	0.024
YPR157W	hypothetical protein	0.024
GCN5	Gcn5p	0.024
ZPS1	Zps1p	0.024
URA3	Ura3p	0.023
CUP1-1	Cup1-1p	0.023
MCM6	Mcm6p	0.023
KAP120	Kap120p	0.023
HO	Hop	0.023
PTR2	Ptr2p	0.023
SAS2	Sas2p	0.022
RRN5	Rrn5p	0.022
SCT1	Sct1p	0.022
NIS1	Nis1p	0.022
ARP5	Arp5p	0.022
YGR017W	hypothetical protein	0.022
ATP6	Atp6p	0.022
ARG8	Arg8p	0.022
AUA1	Aua1p	0.022
PUS9	Pus9p	0.022
YLR422W	hypothetical protein	0.022
MCM3	Mcm3p	0.021
YBR013C	hypothetical protein	0.021
CBF2	Cbf2p	0.021
YJR154W	hypothetical protein	0.021
HST3	Hst3p	0.021
CAF130	Caf130p	0.021
BSC1	Bsc1p	0.021
SSO2	Sso2p	0.021
CHA1	Cha1p	0.021
BIO2	Bio2p	0.021
OAF1	Oaf1p	0.021
REE1	Ree1p	0.020
YNL058C	hypothetical protein	0.020
NOC3	Noc3p	0.020
YKR075C	hypothetical protein	0.020
CPD1	Cpd1p	0.020
YOL013W-A	hypothetical protein	0.020
MIG1	Mig1p	0.020
YHB1	Yhb1p	0.020
SPL2	Spl2p	0.020
POL30	Pol30p	0.020
DIC1	Dic1p	0.019
UPS3	Ups3p	0.019
HPF1	Hpf1p	0.019
YLR363W-A	hypothetical protein	0.019
RKR1	Rkr1p	0.019
RIF1	Rif1p	0.019
NGG1	Ngg1p	0.019
GAL80	Gal80p	0.019
MET8	Met8p	0.019
MF(ALPHA)2	Mf(alpha)2p	0.019
SPT21	Spt21p	0.019
TYE7	Tye7p	0.019
PCL9	Pcl9p	0.018
VBA5	Vba5p	0.018
SPT15	Spt15p	0.018
NHA1	Nha1p	0.018
YKR045C	hypothetical protein	0.018
YPR096C	hypothetical protein	0.018
BNA4	Bna4p	0.018
NOP2	Nop2p	0.018
MDM20	Mdm20p	0.018
RPL7B	Rpl7bp	0.018
YBR074W	hypothetical protein	0.018
TIF6	Tif6p	0.018
FET4	Fet4p	0.018
FCY21	Fcy21p	0.018
SCM4	Scm4p	0.018
YAR066W	hypothetical protein	0.018
TIF4632	Tif4632p	0.017
SCP1	Scp1p	0.017
NOG1	Nog1p	0.017
HMO1	Hmo1p	0.017
LRO1	Lro1p	0.017
MCX1	Mcx1p	0.017
NRG2	Nrg2p	0.017
YJR120W	hypothetical protein	0.017
ICS2	Ics2p	0.017
YAL037C-A	hypothetical protein	0.017
SNF11	Snf11p	0.017
TIP1	Tip1p	0.017
TIR3	Tir3p	0.017
NCE103	Nce103p	0.017
OPT1	Opt1p	0.017
SPO74	Spo74p	0.017
TRI1	Tri1p	0.017
ARO10	Aro10p	0.017
HMRA1	Hmra1p	0.016
PET127	Pet127p	0.016
DUR1,2	Dur1,2p	0.016
YLR132C	hypothetical protein	0.016
UTP20	Utp20p	0.016
SEN1	Sen1p	0.016
SRX1	Srx1p	0.016
YGR035C	hypothetical protein	0.016
FUN12	Fun12p	0.016
NSE4	Nse4p	0.016
YJL160C	hypothetical protein	0.016
TSC3	Tsc3p	0.016
YAL064W	hypothetical protein	0.016
GPD2	Gpd2p	0.016
RAD53	Rad53p	0.016
IZH4	Izh4p	0.016
SUT1	Sut1p	0.016
RNP1	Rnp1p	0.016
YGL006W-A	hypothetical protein	0.016
YJL181W	hypothetical protein	0.016
BRN1	Brn1p	0.016
SVL3	Svl3p	0.016
YKR041W	hypothetical protein	0.016
SOR2	Sor2p	0.015
ADH2	Adh2p	0.015
YLR108C	hypothetical protein	0.015
YDR524W-C	hypothetical protein	0.015
COS12	Cos12p	0.015
YLR040C	hypothetical protein	0.015
TAF2	Taf2p	0.015
HSF1	Hsf1p	0.015
ATM1	Atm1p	0.015
YOR012W	hypothetical protein	0.015
YDR222W	hypothetical protein	0.015
LCL1	Lcl1p	0.015
YDR034C-A	hypothetical protein	0.015
WSC4	Wsc4p	0.015
RAD26	Rad26p	0.015
DBP10	Dbp10p	0.015
YNL067W-B	hypothetical protein	0.015
MFA2	Mfa2p	0.015
YJL107C	hypothetical protein	0.015
YOR387C	hypothetical protein	0.015
YBL044W	hypothetical protein	0.015
ERB1	Erb1p	0.015
OPT2	Opt2p	0.014
ALF1	Alf1p	0.014
MF(ALPHA)1	Mf(alpha)1p	0.014
YML003W	hypothetical protein	0.014
SCY1	Scy1p	0.014
KAP104	Kap104p	0.014
YPL067C	hypothetical protein	0.014
MDR1	Mdr1p	0.014
SIT1	Sit1p	0.014
YOL014W	hypothetical protein	0.014
ENA5	Ena5p	0.014
ATO3	Ato3p	0.014
MIG2	Mig2p	0.014
CDC27	Cdc27p	0.014
YNL033W	hypothetical protein	0.014
ARR2	Arr2p	0.014
RSC58	Rsc58p	0.014
YMR317W	hypothetical protein	0.014
SSK2	Ssk2p	0.014
YPR027C	hypothetical protein	0.014
SPS4	Sps4p	0.014
TOP2	Top2p	0.014
RRT2	Rrt2p	0.014
YMR122W-A	hypothetical protein	0.014
YBL029W	hypothetical protein	0.014
IST2	Ist2p	0.014
PCL2	Pcl2p	0.014
YML100W-A	hypothetical protein	0.014
YBL081W	hypothetical protein	0.014
MAK10	Mak10p	0.014
RKM3	Rkm3p	0.013
YNL162W-A	hypothetical protein	0.013
APC4	Apc4p	0.013
MCM7	Mcm7p	0.013
YLR412C-A	hypothetical protein	0.013
BI4	Bi4p	0.013
TAE2	Tae2p	0.013
PDC5	Pdc5p	0.013
BFR1	Bfr1p	0.013
NAB3	Nab3p	0.013
RBS1	Rbs1p	0.013
YHK8	Yhk8p	0.013
PBP1	Pbp1p	0.013
YNL018C	hypothetical protein	0.013
SAS4	Sas4p	0.013
HOS4	Hos4p	0.013
YLR342W-A	hypothetical protein	0.013
RRT5	Rrt5p	0.013
SIR3	Sir3p	0.013
NUP145	Nup145p	0.013
YCH1	Ych1p	0.013
SMM1	Smm1p	0.013
SET5	Set5p	0.013
TIM50	Tim50p	0.013
AQY2	Aqy2p	0.013
ALT2	Alt2p	0.013
YGL235W	hypothetical protein	0.013
SEN54	Sen54p	0.013
YAR029W	hypothetical protein	0.013
RTT105	Rtt105p	0.013
YLR460C	hypothetical protein	0.013
NIP7	Nip7p	0.013
ECM2	Ecm2p	0.013
CTS1	Cts1p	0.013
YOR316C-A	hypothetical protein	0.013
EFM1	Efm1p	0.013
SWC7	Swc7p	0.013
YCF1	Ycf1p	0.013
SIR4	Sir4p	0.013
VIP1	Vip1p	0.013
UTR1	Utr1p	0.013
DIF1	Dif1p	0.013
HEM3	Hem3p	0.013
BUL1	Bul1p	0.013
ICS3	Ics3p	0.013
GDS1	Gds1p	0.013
GLN1	Gln1p	0.013
MMP1	Mmp1p	0.013
LAG1	Lag1p	0.013
THO1	Tho1p	0.013
ZRT1	Zrt1p	0.013
GCR1	Gcr1p	0.012
DLS1	Dls1p	0.012
BIO5	Bio5p	0.012
BDS1	Bds1p	0.012
HEM13	Hem13p	0.012
YNR062C	hypothetical protein	0.012
CDC4	Cdc4p	0.012
SSP1	Ssp1p	0.012
YBL086C	hypothetical protein	0.012
RIB2	Rib2p	0.012
DOG1	Dog1p	0.012
GNP1	Gnp1p	0.012
YNL034W	hypothetical protein	0.012
AAD15	Aad15p	0.012
HXT11	Hxt11p	0.012
FIT2	Fit2p	0.012
USO1	Uso1p	0.012
SWD1	Swd1p	0.012
CDS1	Cds1p	0.012
DSE4	Dse4p	0.012
SRT1	Srt1p	0.012
YFL034W	hypothetical protein	0.012
FCY22	Fcy22p	0.012
NTO1	Nto1p	0.012
SET1	Set1p	0.012
YER186C	hypothetical protein	0.012
YER064C	hypothetical protein	0.012
MEX67	Mex67p	0.012
YPK9	Ypk9p	0.012
GYL1	Gyl1p	0.012
SLH1	Slh1p	0.012
YFR035C	hypothetical protein	0.012
EAF1	Eaf1p	0.012
SET4	Set4p	0.012
YSP2	Ysp2p	0.012
MUM3	Mum3p	0.012
VEL1	Vel1p	0.012
AAD6	Aad6p	0.012
YCR050C	hypothetical protein	0.012
MOT3	Mot3p	0.012
PFS1	Pfs1p	0.012
AAP1	Aap1p	0.012
FRE4	Fre4p	0.012
SGE1	Sge1p	0.012
YOR385W	hypothetical protein	0.012
NET1	Net1p	0.012
PCT1	Pct1p	0.012
NOP4	Nop4p	0.012
YML053C	hypothetical protein	0.012
YCL001W-B	hypothetical protein	0.011
MMS1	Mms1p	0.011
YOL131W	hypothetical protein	0.011
YGL015C	hypothetical protein	0.011
PSY2	Psy2p	0.011
YER175W-A	hypothetical protein	0.011
SEO1	Seo1p	0.011
KRE29	Kre29p	0.011
IMA2	Ima2p	0.011
BUD9	Bud9p	0.011
YOL114C	hypothetical protein	0.011
YIR042C	hypothetical protein	0.011
RMD6	Rmd6p	0.011
PHO12	Pho12p	0.011
SAW1	Saw1p	0.011
YKL106C-A	hypothetical protein	0.011
PFK27	Pfk27p	0.011
SRO77	Sro77p	0.011
AIF1	Aif1p	0.011
HUR1	Hur1p	0.011
PHO11	Pho11p	0.011
TAD2	Tad2p	0.011
RAD14	Rad14p	0.011
TMA22	Tma22p	0.011
GIN4	Gin4p	0.011
DCG1	Dcg1p	0.011
YPR159C-A	hypothetical protein	0.011
ZRT2	Zrt2p	0.011
CTR3	Ctr3p	0.011
AQR1	Aqr1p	0.011
APC5	Apc5p	0.011
SAM2	Sam2p	0.011
ELP6	Elp6p	0.011
IMA5	Ima5p	0.011
NUP49	Nup49p	0.011
SAM3	Sam3p	0.011
BIO4	Bio4p	0.011
PDC2	Pdc2p	0.011
SWM2	Swm2p	0.011
YER187W	hypothetical protein	0.011
YPL168W	hypothetical protein	0.011
KSH1	Ksh1p	0.011
MNN1	Mnn1p	0.011
THO2	Tho2p	0.011
PMA2	Pma2p	0.011
YER085C	hypothetical protein	0.011
YDR182W-A	hypothetical protein	0.011
FRE7	Fre7p	0.011
YNR063W	hypothetical protein	0.011
GIS4	Gis4p	0.011
YHR177W	hypothetical protein	0.011
SPO77	Spo77p	0.011
YDR109C	hypothetical protein	0.011
YLR012C	hypothetical protein	0.011
YMR244W	hypothetical protein	0.011
YHR035W	hypothetical protein	0.011
YKL070W	hypothetical protein	0.011
PYC2	Pyc2p	0.011
YCR102C	hypothetical protein	0.011
TRA1	Tra1p	0.011
YAL037W	hypothetical protein	0.011
YKL068W-A	hypothetical protein	0.011
REV1	Rev1p	0.011
DSS1	Dss1p	0.011
ECM22	Ecm22p	0.011
YPR036W-A	hypothetical protein	0.011
SCD6	Scd6p	0.011
YPR097W	hypothetical protein	0.011
BAR1	Bar1p	0.010
PHM6	Phm6p	0.010
FRE5	Fre5p	0.010
SLI1	Sli1p	0.010
CUP2	Cup2p	0.010
IME1	Ime1p	0.010
YJL028W	hypothetical protein	0.010
YER130C	hypothetical protein	0.010
RSN1	Rsn1p	0.010
SKS1	Sks1p	0.010
YFL051C	hypothetical protein	0.010
SEC16	Sec16p	0.010
EEB1	Eeb1p	0.010
ISU2	Isu2p	0.010
YNL097C-B	hypothetical protein	0.010
CDC23	Cdc23p	0.010
HDA2	Hda2p	0.010
IES2	Ies2p	0.010
SPP1	Spp1p	0.010
EDC1	Edc1p	0.010
PDC6	Pdc6p	0.010
YOR365C	hypothetical protein	0.010
YLL053C	hypothetical protein	0.010
MAP2	Map2p	0.010
ERV2	Erv2p	0.010
GFD2	Gfd2p	0.010
YLR406C-A	hypothetical protein	0.010
YJL213W	hypothetical protein	0.010
STB1	Stb1p	0.010
YNL035C	hypothetical protein	0.010
YMR001C-A	hypothetical protein	0.010
MOT2	Mot2p	0.010
KEL3	Kel3p	0.010
YOR268C	hypothetical protein	0.010
ORC1	Orc1p	0.010
TOP1	Top1p	0.010
YOL097W-A	hypothetical protein	0.010
YNL146C-A	hypothetical protein	0.010
MDJ2	Mdj2p	0.010
YOR111W	hypothetical protein	0.010
CNE1	Cne1p	0.010