IMP

Process View

Saccharomyces cerevisiae

16 genes annotated in yeast

autophagic vacuole assembly

The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm.

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In addition to gene-name show these genes:

Known genes in the process in yeast Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "autophagic vacuole assembly"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "autophagic vacuole assembly" (in gray)

Name	Description	Probability	Func Analog Organism
ATG11	Atg11p	0.822
ATG13	Atg13p	0.809
ATG9	Atg9p	0.728
ATG29	Atg29p	0.513
ATG1	Atg1p	0.494
ATG4	Atg4p	0.487
VPS30	Vps30p	0.425
ATG3	Atg3p	0.370
ATG7	Atg7p	0.356
ATG21	Atg21p	0.336	Human
ATG14	Atg14p	0.323
CIS1	Cis1p	0.237
ATG20	Atg20p	0.195
ATG23	Atg23p	0.195
VPS15	Vps15p	0.186
NPR2	Npr2p	0.166
SNX4	Snx4p	0.155
HSV2	Hsv2p	0.143
ATG16	Atg16p	0.132
ATG26	Atg26p	0.124
VPS38	Vps38p	0.113
ATG2	Atg2p	0.096
ATG10	Atg10p	0.066
SEC4	Sec4p	0.064
VPS41	Vps41p	0.059
NPL4	Npl4p	0.055
ATG5	Atg5p	0.055
UFD2	Ufd2p	0.053
ATG12	Atg12p	0.050
PEP5	Pep5p	0.045
ATG18	Atg18p	0.045
SPG3	Spg3p	0.040
PEP12	Pep12p	0.040
SEC2	Sec2p	0.039
COT1	Cot1p	0.035
VPS51	Vps51p	0.034
BRO1	Bro1p	0.033
YLR211C	hypothetical protein	0.033
CDC48	Cdc48p	0.029
YPT52	Ypt52p	0.028
VPS21	Vps21p	0.028
SEC10	Sec10p	0.027
FMP48	Fmp48p	0.027
SRD1	Srd1p	0.027
CDC55	Cdc55p	0.026
YNL058C	hypothetical protein	0.026
ARE2	Are2p	0.026
LAP4	Lap4p	0.025
HSP33	Hsp33p	0.024
YAR068W	hypothetical protein	0.024
IML1	Iml1p	0.024
LEU2	Leu2p	0.023
YOL038C-A	hypothetical protein	0.023
YLR264C-A	hypothetical protein	0.022
ARP10	Arp10p	0.022
YLR162W	hypothetical protein	0.021
VPS17	Vps17p	0.020
ICS2	Ics2p	0.020
KSP1	Ksp1p	0.020
GPR1	Gpr1p	0.020
SPL2	Spl2p	0.020
VAM7	Vam7p	0.020
MER1	Mer1p	0.020
CHA1	Cha1p	0.019
SFT1	Sft1p	0.019
HSP32	Hsp32p	0.019
ZPS1	Zps1p	0.019
OPT2	Opt2p	0.018
HPF1	Hpf1p	0.018
PHO81	Pho81p	0.018
ATP6	Atp6p	0.018
VPS53	Vps53p	0.018
HXT3	Hxt3p	0.018
PEP3	Pep3p	0.017
CUP1-1	Cup1-1p	0.017
CRP1	Crp1p	0.017
SFB2	Sfb2p	0.017
YBR013C	hypothetical protein	0.017
YIL151C	hypothetical protein	0.017
YAR066W	hypothetical protein	0.017
HDA2	Hda2p	0.017
YPR157W	hypothetical protein	0.017
REE1	Ree1p	0.017
RPN2	Rpn2p	0.017
SSP1	Ssp1p	0.016
TLG2	Tlg2p	0.016
MFM1	Mfm1p	0.016
DOP1	Dop1p	0.016
GDI1	Gdi1p	0.016
HAP2	Hap2p	0.016
YLR042C	hypothetical protein	0.016
FIS1	Fis1p	0.016
YIL165C	hypothetical protein	0.016
ARG8	Arg8p	0.016
SEC20	Sec20p	0.016
YIR035C	hypothetical protein	0.016
MON2	Mon2p	0.016
CPD1	Cpd1p	0.016
FMT1	Fmt1p	0.016
TYE7	Tye7p	0.015
TRS85	Trs85p	0.015
AUA1	Aua1p	0.015
HSP31	Hsp31p	0.015
DUR1,2	Dur1,2p	0.015
PCL9	Pcl9p	0.015
YJL181W	hypothetical protein	0.015
YNL155W	hypothetical protein	0.015
THP3	Thp3p	0.015
YOL013W-A	hypothetical protein	0.014
AQY2	Aqy2p	0.014
DOG1	Dog1p	0.014
UBX3	Ubx3p	0.014
HTD2	Htd2p	0.014
SEC16	Sec16p	0.014
MF(ALPHA)2	Mf(alpha)2p	0.014
ADH2	Adh2p	0.013
YLR040C	hypothetical protein	0.013
NFT1	Nft1p	0.013
BNA4	Bna4p	0.013
VPS3	Vps3p	0.013
SCM4	Scm4p	0.013
STE18	Ste18p	0.013
ATG19	Atg19p	0.013
BSC1	Bsc1p	0.013
VPS36	Vps36p	0.013
CAR1	Car1p	0.013
SWC7	Swc7p	0.013
ATG8	Atg8p	0.013
SSO1	Sso1p	0.013
GYL1	Gyl1p	0.013
RTT105	Rtt105p	0.013
AIF1	Aif1p	0.013
RSF1	Rsf1p	0.013
YJR120W	hypothetical protein	0.013
YML003W	hypothetical protein	0.013
UPS3	Ups3p	0.013
YKR075C	hypothetical protein	0.013
RNP1	Rnp1p	0.012
NIS1	Nis1p	0.012
SRX1	Srx1p	0.012
YJL218W	hypothetical protein	0.012
LCL1	Lcl1p	0.012
YMR1	Ymr1p	0.012
HNT1	Hnt1p	0.012
IZH4	Izh4p	0.012
DIC1	Dic1p	0.012
YPL168W	hypothetical protein	0.012
TSC3	Tsc3p	0.012
TRS23	Trs23p	0.012
PTR2	Ptr2p	0.012
NRG2	Nrg2p	0.012
SRT1	Srt1p	0.012
CUE4	Cue4p	0.012
YAL064W	hypothetical protein	0.012
YPL067C	hypothetical protein	0.012
YAL037C-A	hypothetical protein	0.012
HUL5	Hul5p	0.012
YPL066W	hypothetical protein	0.012
MDM10	Mdm10p	0.012
PRM9	Prm9p	0.012
COS12	Cos12p	0.012
VPS13	Vps13p	0.012
CTR3	Ctr3p	0.011
NEO1	Neo1p	0.011
VPS54	Vps54p	0.011
YPR096C	hypothetical protein	0.011
YIR042C	hypothetical protein	0.011
PPM1	Ppm1p	0.011
YEA6	Yea6p	0.011
HO	Hop	0.011
YNL234W	hypothetical protein	0.011
RRN5	Rrn5p	0.011
ENA5	Ena5p	0.011
TIR3	Tir3p	0.011
ALT2	Alt2p	0.011
YNL067W-B	hypothetical protein	0.011
YGL006W-A	hypothetical protein	0.011
UBA1	Uba1p	0.011
UTR4	Utr4p	0.011
STE23	Ste23p	0.011
KNH1	Knh1p	0.011
YJL160C	hypothetical protein	0.011
TIP1	Tip1p	0.011
YNR062C	hypothetical protein	0.011
MET8	Met8p	0.011
RMD6	Rmd6p	0.011
YML053C	hypothetical protein	0.011
YMR317W	hypothetical protein	0.011
SAM3	Sam3p	0.011
YNL018C	hypothetical protein	0.011
YJL107C	hypothetical protein	0.011
MF(ALPHA)1	Mf(alpha)1p	0.011
MCT1	Mct1p	0.011
DUG1	Dug1p	0.011
HUR1	Hur1p	0.011
ARO10	Aro10p	0.011
FCY22	Fcy22p	0.010
YDR034C-A	hypothetical protein	0.010
AAD6	Aad6p	0.010
RAD55	Rad55p	0.010
YOR387C	hypothetical protein	0.010
CTS1	Cts1p	0.010
YNL033W	hypothetical protein	0.010
ALE1	Ale1p	0.010
YBL029W	hypothetical protein	0.010
YML100W-A	hypothetical protein	0.010
YBL044W	hypothetical protein	0.010
WSC4	Wsc4p	0.010
MTC4	Mtc4p	0.010
ERD2	Erd2p	0.010
SGE1	Sge1p	0.010
MDS3	Mds3p	0.010