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Danio rerio

13 genes annotated in zebrafish

endomembrane system organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endomembrane system.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "endomembrane system organization"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "endomembrane system organization" (in gray)

Name	Description	Probability	Func Analog Organism
itgb1b.2	integrin, beta 1b.2	0.495	Human
pafah1b1b	platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit b	0.315	Mouse
ccnd1	cyclin D1	0.226
ahr2	aryl hydrocarbon receptor 2	0.174
anxa2a	annexin A2a	0.158	Zebrafish
rab2a	RAB2A, member RAS oncogene family	0.148	Human
sec61al1	Sec61 alpha like 1	0.123	Human
dpysl3	dihydropyrimidinase-like 3	0.102
pak2a	p21 (CDKN1A)-activated kinase 2a	0.096
cnn2	calponin 2	0.084
cacna1da	calcium channel, voltage-dependent, L type, alpha 1D subunit, a	0.082
kdelr2	KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2	0.078
cdipt	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	0.075
lamb1a	laminin, beta 1a	0.075
dlg1	discs, large (Drosophila) homolog 1	0.069	Human
vim	vimentin	0.069
aldocb	aldolase C, fructose-bisphosphate, b	0.068
iqgap1	IQ motif containing GTPase activating protein 1	0.067
ahnak	AHNAK nucleoprotein	0.065
ywhaqb	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b	0.064
alas2	aminolevulinate, delta-, synthetase 2	0.062
capns1a	calpain, small subunit 1 a	0.062
pfn2	profilin 2	0.060
hoxc6a	homeo box C6a	0.058
anxa1a	annexin A1a	0.057	Zebrafish
cltca	clathrin, heavy polypeptide a (Hc)	0.055	Fly
ldb1a	LIM-domain binding factor 1a	0.055
zgc:100829	zgc:100829	0.054
nlgn2b	neuroligin 2b	0.053
elovl1b	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1b	0.052
atp1b2a	ATPase, Na+/K+ transporting, beta 2a polypeptide	0.052
tmed10	transmembrane emp24-like trafficking protein 10 (yeast)	0.050	Mouse
sec31a	sec31 homolog A (S. cerevisiae)	0.050
fabp11a	fatty acid binding protein 11a	0.050
ckbb	creatine kinase, brain b	0.047
robo3	roundabout homolog 3	0.047
f11r	F11 receptor	0.044
epb41l5	erythrocyte membrane protein band 4.1 like 5	0.042
svil	supervillin	0.042
hk1	hexokinase 1	0.042
arcn1l	archain 1 like	0.041	Yeast
arf2	ADP-ribosylation factor 2	0.040
capns1b	calpain, small subunit 1 b	0.038
chmp4b	chromatin modifying protein 4B	0.038
alcama	activated leukocyte cell adhesion molecule a	0.037
capn9	calpain 9	0.035
yap1	Yes-associated protein 1	0.034
papss2b	3'-phosphoadenosine 5'-phosphosulfate synthase 2b	0.034
tmprss4a	transmembrane protease, serine 4a	0.034
fcho2	FCH domain only 2	0.034
hmgb3a	high-mobility group box 3a	0.034
si:dkey-76k16.7	si:dkey-76k16.7	0.034
s100v1	S100 calcium binding protein V1	0.033
eml2	echinoderm microtubule associated protein like 2	0.033
slc4a4a	solute carrier family 4, member 4a	0.033
mfn2	mitofusin 2	0.032
dsc2l	desmocollin 2 like	0.031
itgb1a	integrin, beta 1a	0.031	Human
copa	coatomer protein complex, subunit alpha	0.031
esrrb	estrogen-related receptor beta	0.031
uchl1	ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.031
tcf7	transcription factor 7 (T-cell specific, HMG-box)	0.031
zgc:153997	zgc:153997	0.029
ch25hl1.1	cholesterol 25-hydroxylase like 1, member 1	0.028
LOC100537975	thyroid receptor-interacting protein 11-like	0.028
tcf12	transcription factor 12	0.028
atp6v0d1	ATPase, H+ transporting, V0 subunit D isoform 1	0.028
plod1a	procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1a	0.028
nptna	neuroplastin a	0.028
msna	moesin a	0.027	Worm
zgc:101724	zgc:101724	0.027
cxcr4b	chemokine (C-X-C motif), receptor 4b	0.026	Mouse
apc	adenomatosis polyposis coli	0.026
exoc3	exocyst complex component 3	0.026
emilin1a	elastin microfibril interfacer 1a	0.025
klf4	Kruppel-like factor 4	0.025
krt4	keratin 4	0.025
lamc1	laminin, gamma 1	0.024
clstn1	calsyntenin 1	0.024
celsr3	cadherin, EGF LAG seven-pass G-type receptor 3	0.024
atp1b1a	ATPase, Na+/K+ transporting, beta 1a polypeptide	0.024	Human
ube2na	ubiquitin-conjugating enzyme E2Na	0.024
hsd3b7	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase	0.023
col19a1	collagen, type XIX, alpha 1	0.023
mmp2	matrix metalloproteinase 2	0.023
atp6v1h	ATPase, H+ transporting, lysosomal, V1 subunit H	0.023
nhsl1a	NHS-like 1a	0.023
hmx2	H6 family homeobox 2	0.023
cast	calpastatin	0.022
hoxc6b	homeo box C6b	0.022
acvr1b	activin A receptor, type IB	0.022
myh11a	myosin, heavy polypeptide 11, smooth muscle a	0.022
dync1h1	dynein, cytoplasmic 1, heavy chain 1	0.022
rcor1	REST corepressor 1	0.022
hn1l	hematological and neurological expressed 1-like	0.021
wwp2	WW domain containing E3 ubiquitin protein ligase 2	0.021
flncb	filamin C, gamma b (actin binding protein 280)	0.021
igfbp6a	insulin-like growth factor binding protein 6a	0.021
alcamb	activated leukocyte cell adhesion molecule b	0.021
LOC561662	Golgi phosphoprotein 3-like	0.020
hdlbp	high density lipoprotein-binding protein (vigilin)	0.020
rab7	RAB7, member RAS oncogene family	0.020
eif4ebp2	eukaryotic translation initiation factor 4E binding protein 2	0.020
myo10l1	myosin X-like 1	0.020
arfgap2	ADP-ribosylation factor GTPase activating protein 2	0.020
atp6v1c1b	ATPase, H+ transporting, lysosomal, V1 subunit C, isoform 1b	0.019
nlgn2a	neuroligin 2a	0.019
calca	calcitonin/calcitonin-related polypeptide, alpha	0.019
perp	PERP, TP53 apoptosis effector	0.019
ndrg4	N-myc downstream regulated gene 4	0.019
slc20a1a	solute carrier family 20, member 1a	0.019
snx1	sorting nexin 1	0.019
prnprs3	prion protein, related sequence 3	0.018
LOC555279	hypothetical LOC555279	0.018
ptpra	protein tyrosine phosphatase, receptor type, A	0.018
stat3	signal transduction and activation of transcription 3	0.018
lnpa	limb and neural patterns a	0.017
ttyh2l	tweety homolog 2, like	0.017
atp6v0cb	ATPase, H+ transporting, lysosomal, V0 subunit c, b	0.017
epcam	epithelial cell adhesion molecule	0.017
pafah1b3	platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit	0.017
ppp6r2	protein phosphatase 6, regulatory subunit 2	0.017
sh3gl1b	SH3-domain GRB2-like 1b	0.017	Fly
pvrl1a	poliovirus receptor-related 1a	0.017
cntn1a	contactin 1a	0.017
cfl2l	cofilin 2, like	0.017
gtpbp1	GTP binding protein 1	0.017
bc2	putative breast adenocarcinoma marker	0.017
copeb	core promoter element binding protein	0.017
gpia	glucose phosphate isomerase a	0.017
ccdc94	coiled-coil domain containing 94	0.017
ephb4b	eph receptor B4b	0.016
sh3gl3	SH3-domain GRB2-like 3	0.016	Fly
snx4	sorting nexin 4	0.016
rogdi	rogdi homolog (Drosophila)	0.016
hsp47	heat shock protein 47	0.016
arnt2	aryl hydrocarbon receptor nuclear translocator 2	0.016
ggcx	gamma-glutamyl carboxylase	0.016
gdf6a	growth differentiation factor 6a	0.016
appa	amyloid beta (A4) precursor protein a	0.016
rab13	RAB13, member RAS oncogene family	0.016	Human Yeast Rat
cyp26a1	cytochrome P450, subfamily XXVIA, polypeptide 1	0.016
nucb2a	nucleobindin 2a	0.016
ptger2a	prostaglandin E receptor 2a (subtype EP2)	0.016
casz1	castor zinc finger 1	0.015
sec23a	Sec23 homolog A (S. cerevisiae)	0.015
dpysl2b	dihydropyrimidinase-like 2b	0.015
tmf1	TATA element modulatory factor 1	0.015
pglyrp6	peptidoglycan recognition protein 6	0.015
thy1	Thy-1 cell surface antigen	0.015
nr3c1	nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.015
LOC100535549	cytoplasmic polyadenylation element-binding protein 4-like	0.015
rc3	rabconnectin 3	0.015
tuba8l3	tubulin, alpha 8 like 3	0.015
col1a1b	collagen, type I, alpha 1b	0.015
timp2b	tissue inhibitor of metalloproteinase 2b	0.015
hsp90a.2	heat shock protein 90-alpha 2	0.015
she	Src homology 2 domain containing E	0.015
calm2a	calmodulin 2a (phosphorylase kinase, delta)	0.015
pitpna	phosphatidylinositol transfer protein, alpha	0.014
vldlr	very low density lipoprotein receptor	0.014
shroom4	shroom family member 4	0.014
zgc:92061	zgc:92061	0.014
meis4.1a	myeloid ecotropic viral integration site 4.1a	0.014
notch3	notch homolog 3	0.014
gsnb	gelsolin b	0.014
ctdsp1	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	0.014
lass2	LAG1 homolog, ceramide synthase 2 (S. cerevisiae)	0.014
dazap2	DAZ associated protein 2	0.014
arrb2b	arrestin, beta 2b	0.014
gpr98	G protein-coupled receptor 98	0.014
tuba1	tubulin, alpha 1	0.014
zgc:77849	zgc:77849	0.014
rplp2	ribosomal protein, large P2	0.014
prkcbb	protein kinase C, beta b	0.014
atp6v1d	ATPase, H+ transporting, V1 subunit D and ATPase, H+ transporting, V1 subunit D	0.014
terfa	telomeric repeat binding factor a	0.014
selt2	selenoprotein T, 2	0.014
si:ch211-232d19.4	si:ch211-232d19.4	0.014
ptpn11a	protein tyrosine phosphatase, non-receptor type 11, a	0.014
trim55a	tripartite motif-containing 55a	0.014
itm1	integral membrane protein 1	0.014
kdm5c	lysine (K)-specific demethylase 5C	0.014
calm1a	calmodulin 1a	0.014
elovl4b	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4b	0.014
col1a2	collagen, type I, alpha 2	0.013
smad1	MAD homolog 1 (Drosophila)	0.013
tcf3	transcription factor 3	0.013
tmem9b	TMEM9 domain family, member B	0.013
tuba1l2	tubulin, alpha 1, like 2	0.013
fam3c	family with sequence similarity 3, member C	0.013
pdzd7a	PDZ domain containing 7a	0.013
arl3l2	ADP-ribosylation factor-like 3, like 2	0.013
zgc:153369	zgc:153369	0.013
rcbtb1	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	0.013
flot1b	flotillin 1b	0.013	Human Mouse
cacnb1	calcium channel, voltage-dependent, beta 1 subunit	0.013
flot1	flotillin 1	0.013
atp6v1g1	ATPase, H+ transporting, V1 subunit G isoform 1	0.013
zgc:55572	zgc:55572	0.013
trim13	tripartite motif-containing 13	0.013
aqp3a	aquaporin 3a	0.013
s100a10b	S100 calcium binding protein A10b	0.013	Human
cdon	cell adhesion molecule-related/down-regulated by oncogenes	0.013
ggps1	geranylgeranyl diphosphate synthase 1	0.013
prkaa1	protein kinase, AMP-activated, alpha 1 catalytic subunit	0.013
fgf13b	fibroblast growth factor 13b	0.013	Mouse
kif17	kinesin family member 17	0.013
ube2g2	ubiquitin-conjugating enzyme E2G 2	0.012
laptm4a	lysosomal-associated protein transmembrane 4 alpha	0.012
cnn3a	calponin 3, acidic a	0.012
syt11a	synaptotagmin XIa	0.012
pkm2a	pyruvate kinase, muscle, a	0.012
atp6ap2	ATPase, H+ transporting, lysosomal accessory protein 2	0.012
plxna4	plexin A4	0.012
zgc:92380	zgc:92380	0.012
uxs1	UDP-glucuronic acid decarboxylase 1	0.012
birc2	baculoviral IAP repeat-containing 2	0.012
hdac3	histone deacetylase 3	0.012
macf1	microtubule-actin crosslinking factor 1	0.012
slc4a1a	solute carrier family 4, anion exchanger, member 1a	0.012
sec13	SEC13 homolog (S. cerevisiae)	0.012
arf5	ADP-ribosylation factor 5	0.012
mapkapk2a	mitogen-activated protein kinase-activated protein kinase 2a	0.012
zgc:195154	zgc:195154	0.012
wu:fc69a03	wu:fc69a03	0.012
capn2b	calpain 2, (m/II) large subunit b	0.012
mga	MAX gene associated	0.012
si:dkeyp-110e4.6	si:dkeyp-110e4.6	0.012
nrg1	neuregulin 1	0.012
ccz1	CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	0.012
hmgb1b	high-mobility group box 1b	0.012
zgc:56005	zgc:56005	0.012
pvalb6	parvalbumin 6	0.012
cxadr	coxsackie virus and adenovirus receptor	0.012
exoc7	exocyst complex component 7	0.012
zgc:92242	zgc:92242	0.012
col12a1	collagen, type XII, alpha 1	0.012
anxa6	annexin A6	0.012
col1a1a	collagen, type I, alpha 1a	0.011
eif3hb	eukaryotic translation initiation factor 3, subunit H, b	0.011
elovl7a	ELOVL family member 7, elongation of long chain fatty acids (yeast) a	0.011
tsc22d1	TSC22 domain family, member 1	0.011
rtn4b	reticulon 4b	0.011
aktip	akt interacting protein	0.011
prox2	prospero homeobox 2	0.011
midn	midnolin	0.011
mbnl2	muscleblind-like 2 (Drosophila)	0.011
notch2	notch homolog 2	0.011
rdh5	retinol dehydrogenase 5 (11-cis/9-cis)	0.011
myl9l	myosin, light polypeptide 9, like	0.011
rgp1	RGP1 retrograde golgi transport homolog (S. cerevisiae)	0.011
g2e3	G2/M-phase specific E3 ubiquitin ligase	0.011
yipf5	Yip1 domain family, member 5	0.011
ef1	ETS-related factor1	0.011
zgc:101071	zgc:101071	0.011
kif23	kinesin family member 23	0.011
cdkn1c	cyclin-dependent kinase inhibitor 1C (p57, Kip2)	0.011
cldne	claudin e	0.011
gata1a	GATA binding protein 1a	0.011
ppargc1al	peroxisome proliferator-activated receptor gamma, coactivator 1 alpha like	0.011
si:dkey-9k8.1	si:dkey-9k8.1	0.011
slc25a22	solute carrier family 25 (mitochondrial carrier: glutamate), member 22	0.011
tcf7l1b	transcription factor 7-like 1b (T-cell specific, HMG-box)	0.011
zgc:56272	zgc:56272	0.011	Human
s100v2	S100 calcium binding protein V2	0.011
rps3	ribosomal protein S3	0.011
sec24c	SEC24 family, member C (S. cerevisiae)	0.011
arfgef1	ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)	0.011	Human
sulf2	sulfatase 2	0.011
mycn	v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	0.011
ptpn23a	protein tyrosine phosphatase, non-receptor type 23, a	0.011
anxa1b	annexin A1b	0.011	Zebrafish
ap1s1	adaptor-related protein complex 1, sigma 1 subunit	0.011
jak1	Janus kinase 1	0.011
smap1	stromal membrane-associated protein 1	0.010
atp2a1	ATPase, Ca++ transporting, cardiac muscle, fast twitch 1	0.010
b3galt2	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	0.010
copb2	coatomer protein complex, subunit beta 2	0.010
rcn1	reticulocalbin 1, EF-hand calcium binding domain	0.010
tubb5	tubulin, beta 5	0.010
cul1b	cullin 1b	0.010
met	met proto-oncogene (hepatocyte growth factor receptor)	0.010
icn	ictacalcin	0.010
oaz2a	ornithine decarboxylase antizyme 2a	0.010
pde6a	phosphodiesterase 6A, cGMP-specific, rod, alpha	0.010