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Process View

Danio rerio

1 genes annotated in zebrafish

regulation of gene silencing

Any process that modulates the rate, frequency, or extent of gene silencing, the transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "regulation of gene silencing"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "regulation of gene silencing" (in gray)

Name	Description	Probability	Func Analog Organism
whsc1	Wolf-Hirschhorn syndrome candidate 1	0.061
usp1	ubiquitin specific protease 1	0.050
ppp1cbl	protein phosphatase 1, catalytic subunit, beta isoform, like	0.044
wdhd1	WD repeat and HMG-box DNA binding protein 1	0.043
plxnb2b	plexin b2b	0.039
LOC567638	hypothetical LOC567638	0.034
buc	bucky ball	0.032
sephs1	selenophosphate synthetase 1	0.032
huwe1	HECT, UBA and WWE domain containing 1	0.029
zgc:154089	zgc:154089	0.029
csrp1a	cysteine and glycine-rich protein 1a	0.028
ilf3a	interleukin enhancer binding factor 3a	0.027
her15.2	hairy and enhancer of split-related 15.2	0.026
hist2h3ca1	histone 2, H3ca1	0.026
rrm1	ribonucleotide reductase M1 polypeptide	0.025
hp1bp3	heterochromatin protein 1, binding protein 3	0.024
celf1	cugbp, Elav-like family member 1	0.024
tubg1	tubulin, gamma 1	0.024
si:ch211-57k11.10	si:ch211-57k11.10	0.024
msi2b	musashi homolog 2b (Drosophila)	0.023
terfa	telomeric repeat binding factor a	0.022
LOC554173	abnormal spindles	0.022
lhx9	LIM homeobox 9	0.022
zgc:113143	zgc:113143	0.021
cand1	cullin-associated and neddylation-dissociated 1	0.021
wdr82	WD repeat domain containing 82	0.021
si:ch73-60i13.2	si:ch73-60i13.2	0.021
msh2	mutS homolog 2 (E. coli)	0.020
pola1	polymerase (DNA directed), alpha 1	0.019
fam168a	family with sequence similarity 168, member A	0.019
ppm1g	protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform	0.019
lmnb1	lamin B1	0.019
rbbp6	retinoblastoma binding protein 6	0.019
zgc:110113	zgc:110113	0.018
rpa1	replication protein A1	0.018
trim71	tripartite motif-containing 71	0.017
neo1	neogenin 1	0.017
mus81	MUS81 endonuclease homolog (yeast)	0.017
dip2c	DIP2 disco-interacting protein 2 homolog C (Drosophila)	0.017
hoxd12a	homeo box D12a	0.017
dnmt1	DNA (cytosine-5-)-methyltransferase 1	0.017
sh3gl1b	SH3-domain GRB2-like 1b	0.017
zgc:66100	zgc:66100	0.017
zgc:158604	zgc:158604	0.016
ppm1aa	protein phosphatase, Mg2+/Mn2+ dependent, 1Aa	0.016
ap2a1	adaptor-related protein complex 2, alpha 1 subunit	0.016
gdf6a	growth differentiation factor 6a	0.015
fkbp4	FK506 binding protein 4	0.015
dhx37	DEAH (Asp-Glu-Ala-His) box polypeptide 37	0.015
pds5b	PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	0.015
creb1	cAMP responsive element binding protein 1	0.015
ehmt1a	euchromatic histone-lysine N-methyltransferase 1a	0.015
wu:fa97a01	wu:fa97a01	0.015
chek2	CHK2 checkpoint homolog (S. pombe)	0.015
ctbp1	C-terminal binding protein 1	0.015
LOC561889	granulito	0.015
skiv2l2	superkiller viralicidic activity 2-like 2	0.015
hcfc1b	host cell factor C1b	0.015
setd2	SET domain containing 2	0.015
npat	nuclear protein, ataxia-telangiectasia locus	0.015
slbp	stem-loop binding protein	0.014
cisd2	CDGSH iron sulfur domain 2	0.014
fen1	flap structure-specific endonuclease 1	0.014
cnot1	CCR4-NOT transcription complex, subunit 1	0.014
smc2	structural maintenance of chromosomes 2	0.014
si:ch211-215h6.2	si:ch211-215h6.2	0.014
zgc:100817	zgc:100817	0.014
ctdspl2a	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2a	0.014
si:dkey-202c5.1	si:dkey-202c5.1	0.014
zgc:56197	zgc:56197	0.014
sfswap	splicing factor, suppressor of white-apricot homolog (Drosophila)	0.014
zgc:110540	zgc:110540	0.013
polr2a	polymerase (RNA) II (DNA directed) polypeptide A	0.013
prim1	primase polypeptide 1	0.013
mll4b	myeloid/lymphoid or mixed-lineage leukemia 4b	0.013
orc6	origin recognition complex, subunit 6	0.013
mynn	myoneurin	0.013
tfdp1a	transcription factor Dp-1, a	0.013
anp32a	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	0.013
rif1	RAP1 interacting factor homolog (yeast)	0.013
si:ch211-1n9.7	si:ch211-1n9.7	0.013
tmem48	transmembrane protein 48	0.013
tra2b	transformer 2 beta homolog (Drosophila)	0.013
hcfc1a	host cell factor C1a	0.013
cbx1a	chromobox homolog 1a (HP1 beta homolog Drosophila)	0.012	Fly
prdm2b	PR domain containing 2, with ZNF domain b	0.012
mtmr8	myotubularin related protein 8	0.012
tcea1	transcription elongation factor A (SII), 1	0.012
b4galt6	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	0.012
adar	adenosine deaminase, RNA-specific	0.012	Mouse
ythdf1	YTH domain family, member 1	0.012
LOC100149834	cdc2-related kinase, arginine/serine-rich-like	0.012
mta2	metastasis associated 1 family, member 2	0.011
nusap1	nucleolar and spindle associated protein 1	0.011
zgc:152930	zgc:152930	0.011
bokb	BCL2-related ovarian killer b	0.011
mll4a	myeloid/lymphoid or mixed-lineage leukemia 4a	0.011
rtf1	Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.011
rpe65b	retinal pigment epithelium-specific protein 65b	0.011
efcab11	EF-hand calcium binding domain 11	0.011
zgc:85727	zgc:85727	0.011
prpf4b	PRP4 pre-mRNA processing factor 4 homolog B	0.011
si:ch211-255l12.1	si:ch211-255l12.1	0.011
nnt	nicotinamide nucleotide transhydrogenase	0.011
gab1	GRB2-associated binding protein 1	0.011
suv420h1	suppressor of variegation 4-20 homolog 1 (Drosophila)	0.011
rfc5	replication factor C (activator 1) 5	0.011
znf711	zinc finger protein 711	0.011
srrt	serrate RNA effector molecule homolog (Arabidopsis)	0.011
spred1	sprouty-related, EVH1 domain containing 1	0.011
setd8b	SET domain containing (lysine methyltransferase) 8b	0.011
cuedc2	CUE domain containing 2	0.011
wu:fi75a02	wu:fi75a02	0.011
lrrc42	leucine rich repeat containing 42	0.011
ddr2b	discoidin domain receptor family, member 2b	0.011
si:ch1073-351m12.1	si:ch1073-351m12.1	0.011
usp7	ubiquitin specific peptidase 7 (herpes virus-associated)	0.011
grip1	glutamate receptor interacting protein 1	0.011
lrwd1	leucine-rich repeats and WD repeat domain containing 1	0.011
cnn3b	calponin 3, acidic b	0.011
suv420h2	suppressor of variegation 4-20 homolog 2 (Drosophila)	0.010
sass6	spindle assembly 6 homolog (C. elegans)	0.010
stau2	staufen, RNA binding protein, homolog 2 (Drosophila)	0.010	Worm
ecm2	extracellular matrix protein 2, female organ and adipocyte specific	0.010
zgc:103564	zgc:103564	0.010
gbas	glioblastoma amplified sequence	0.010
taf3	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto	0.010
setd8a	SET domain containing (lysine methyltransferase) 8a	0.010
faf1	Fas associated factor 1	0.010
tusc3	tumor suppressor candidate 3	0.010
git2b	G protein-coupled receptor kinase interactor 2b	0.010
mll2	myeloid/lymphoid or mixed-lineage leukemia 2	0.010
nop10	NOP10 ribonucleoprotein homolog (yeast)	0.010
polr1a	polymerase (RNA) I polypeptide A	0.010
ndst2a	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a	0.010