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Danio rerio

2 genes annotated in zebrafish

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positive regulation of gastrulation

GO:2000543

Any process that activates or increases the frequency, rate or extent of gastrulation.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "positive regulation of gastrulation"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "positive regulation of gastrulation" (in gray)

Name	Description	Probability	Func Analog Organism
osr1	odd-skipped related 1 (Drosophila)	0.913	Human
tbx5a	T-box 5a	0.831
foxa3	forkhead box A3	0.212
efnb2a	ephrin B2a	0.205
foxj1a	forkhead box J1a	0.203
shhb	sonic hedgehog b	0.198
osr2	odd-skipped related 2 (Drosophila)	0.188	Mouse
foxn4	forkhead box N4	0.182
jag1b	jagged 1b	0.180
sox2	SRY-box containing gene 2	0.178
foxa1	forkhead box A1	0.176
cdh2	cadherin 2, neuronal	0.172
hnf1ba	HNF1 homeobox Ba	0.171
etv2	ets variant gene 2	0.155
bmp4	bone morphogenetic protein 4	0.153
lmx1b.1	LIM homeobox transcription factor 1, beta 1	0.147
wt1b	wilms tumor 1b	0.139
notch3	notch homolog 3	0.135	Zebrafish
notch1a	notch homolog 1a	0.130
pcdh18b	protocadherin 18b	0.130
nkx2.2a	NK2 transcription factor related 2a	0.128
lhx5	LIM homeobox 5	0.119
dlx3b	distal-less homeobox gene 3b	0.118
raraa	retinoic acid receptor, alpha a	0.114
rfx2	regulatory factor X, 2 (influences HLA class II expression)	0.107
tcf7	transcription factor 7 (T-cell specific, HMG-box)	0.100
jag2	jagged 2	0.095
twist2	twist2	0.091
nkd1	naked cuticle homolog 1 (Drosophila)	0.089
lmx1b.2	LIM homeobox transcription factor 1, beta 2	0.087
foxb1.2	forkhead box B1.2	0.085
gsc	goosecoid	0.082
fli1a	friend leukemia integration 1a	0.081
scube2	signal peptide, CUB domain, EGF-like 2	0.080
wnt1	wingless-type MMTV integration site family, member 1	0.078
hnf1bb	HNF1 homeobox Bb	0.077
mecom	MDS1 and EVI1 complex locus	0.074
wnt9a	wingless-type MMTV integration site family, member 9A	0.073
dld	deltaD	0.069
foxj1b	forkhead box J1b	0.067
gata6	GATA-binding protein 6	0.066
nkx6.1	NK6 transcription factor related, locus 1 (Drosophila)	0.063
foxc1a	forkhead box C1a	0.062
dact2	dapper homolog 2, antagonist of beta-catenin (xenopus)	0.060
col2a1a	collagen type II, alpha-1a	0.059
ascl1a	achaete-scute complex-like 1a (Drosophila)	0.058
dcc	deleted in colorectal carcinoma	0.058
shha	sonic hedgehog a	0.058
hhex	hematopoietically expressed homeobox	0.057
meis3	myeloid ecotropic viral integration site 3	0.056
neurod4	neurogenic differentiation 4	0.055
gh1	growth hormone 1	0.054
bmper	BMP binding endothelial regulator	0.054
barhl2	BarH-like 2	0.051
gyltl1b	glycosyltransferase-like 1b	0.050
th	tyrosine hydroxylase	0.048
dlc	deltaC	0.047
kdrl	kinase insert domain receptor like	0.046
irx1b	iroquois homeobox protein 1, b	0.045
dla	deltaA	0.044
gata2a	GATA-binding protein 2a	0.044
pitx2	paired-like homeodomain transcription factor 2	0.043
elavl3	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	0.043
myod1	myogenic differentiation 1	0.042
eya1	eyes absent homolog 1	0.042
hey2	hairy/enhancer-of-split related with YRPW motif 2	0.042
tshb	thyroid stimulating hormone, beta subunit	0.041
epha4a	eph receptor A4a	0.041
emx1	empty spiracles homeobox 1	0.040
wnt2bb	wingless-type MMTV integration site family, member 2Bb	0.039
twist1a	twist1a	0.039
aldh1a2	aldehyde dehydrogenase 1 family, member A2	0.039
wif1	wnt inhibitory factor 1	0.039
dbx1a	developing brain homeobox 1a	0.038
foxd3	forkhead box D3	0.037
pea3	ETS-domain transcription factor pea3	0.037
lhx2b	LIM homeobox 2b	0.037
hoxc4a	homeo box C4a	0.037
dlx2a	distal-less homeobox gene 2a	0.036
neo1	neogenin 1	0.035
six4b	sine oculis homeobox homolog 4b	0.035
tcf7l2	transcription factor 7-like 2 (T-cell specific, HMG-box)	0.034
ascl1b	achaete-scute complex-like 1b (Drosophila)	0.033
hoxb1a	homeo box B1a	0.033
olig2	oligodendrocyte lineage transcription factor 2	0.033
sim1a	single-minded homolog 1a (Drosophila)	0.032
pkd2	polycystic kidney disease 2	0.032
her9	hairy-related 9	0.032
pbx4	pre-B-cell leukemia transcription factor 4	0.032
hoxd3a	homeo box D3a	0.031
nkx2.3	NK2 transcription factor related 3	0.030
ptch1	patched 1	0.030
gbx2	gastrulation brain homeo box 2	0.028
pcdh18a	protocadherin 18a	0.028
gata1a	GATA binding protein 1a	0.028
cyp26c1	cytochrome P450, family 26, subfamily C, polypeptide 1	0.027
foxp2	forkhead box P2	0.027
ptgs1	prostaglandin-endoperoxide synthase 1	0.027
dkk1b	dickkopf 1b	0.027
fgf3	fibroblast growth factor 3	0.027
bhlhe41	basic helix-loop-helix family, member e41	0.026
tbx15	T-box 15	0.026
pax8	paired box gene 8	0.026
fzd10	frizzled homolog 10	0.025
nkx3.2	NK3 homeobox 2	0.025
hoxd4a	homeo box D4a	0.025
hoxb3a	homeo box B3a	0.025
wt1a	wilms tumor 1a	0.025
aplnrb	apelin receptor b	0.025
fstl1a	follistatin-like 1a	0.024
fzd7b	frizzled homolog 7b	0.024
pcdh2ac	protocadherin 2 alpha c	0.024
lmo4a	LIM domain only 4a	0.024
plod1a	procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1a	0.024
hoxb4a	homeo box B4a	0.024
epha4b	eph receptor A4b	0.024
nkx2.5	NK2 transcription factor related 5	0.023
fzd8a	frizzled homolog 8a	0.023
tjp1	tight junction protein 1 (zona occludens 1)	0.023
rpl19	ribosomal protein L19	0.023
olig3	oligodendrocyte transcription factor 3	0.023
gdnf	glial cell derived neurotrophic factor	0.023
irx3b	iroquois homeobox protein 3b	0.023
tcf21	transcription factor 21	0.023
tp63	tumor protein p63	0.023
pitx3	paired-like homeodomain transcription factor 3	0.022
hmgb2b	high-mobility group box 2b	0.022
brd2b	bromodomain containing 2b	0.021
dmbx1a	diencephalon/mesencephalon homeobox 1a	0.021
msxc	muscle segment homeobox C	0.020
gbx1	gastrulation brain homeobox 1	0.020
hoxa2b	homeo box A2b	0.020
lfng	lunatic fringe homolog	0.020
six2a	sine oculis-related homeobox 2a	0.020
axin2	axin 2 (conductin, axil)	0.019
vegfaa	vascular endothelial growth factor Aa	0.019
sfrp5	secreted frizzled-related protein 5	0.019
tgfb3	transforming growth factor, beta 3	0.019
ins	preproinsulin	0.018
rplp0	ribosomal protein, large, P0	0.018
traf4a	tnf receptor-associated factor 4a	0.018
wnt3	wingless-type MMTV integration site family, member 3	0.018
her1	hairy-related 1	0.018
cnr1	cannabinoid receptor 1	0.018
twist3	twist3	0.018
dusp5	dual specificity phosphatase 5	0.018
nrarpa	notch-regulated ankyrin repeat protein a	0.018
hgfa	hepatocyte growth factor a	0.017
nkx2.1a	NK2 homeobox 1a	0.017
fgf10a	fibroblast growth factor 10a	0.017
pax6a	paired box gene 6a	0.017
ednra	endothelin receptor type A	0.017
dnmt8	DNA (cytosine-5-)-methyltransferase 8	0.017
cdh5	cadherin 5	0.017
rps2	ribosomal protein S2	0.017
kdr	kinase insert domain receptor (a type III receptor tyrosine kinase)	0.017
wnt4a	wingless-type MMTV integration site family, member 4a	0.016
irx5a	iroquois homeobox protein 5a	0.016
rx3	retinal homeobox gene 3	0.016
bmp2b	bone morphogenetic protein 2b	0.016
prl	prolactin	0.016
hoxb2a	homeo box B2a	0.016
met	met proto-oncogene (hepatocyte growth factor receptor)	0.016
tbx18	T-box 18	0.016
nog1	noggin 1	0.016
fgfr4	fibroblast growth factor receptor 4	0.015
cxcl12b	chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)	0.015
has2	hyaluronan synthase 2	0.015
hoxc6a	homeo box C6a	0.015
irx7	iroquois homeobox protein 7	0.015
tbx2b	T-box 2b	0.015
nlgn1	neuroligin 1	0.015
rest	RE1-silencing transcription factor	0.015
foxa2	forkhead box A2	0.014	Mouse
mnx1	motor neuron and pancreas homeobox 1	0.014
lhx1a	LIM homeobox 1a	0.014	Mouse
celsr1a	cadherin EGF LAG seven-pass G-type receptor 1a	0.014
dhrs3a	dehydrogenase/reductase (SDR family) member 3a	0.014
her12	hairy-related 12	0.014
zic1	zic family member 1 (odd-paired homolog, Drosophila)	0.014
hand2	heart and neural crest derivatives expressed transcript 2	0.014
tbx16	T-box gene 16	0.014
dact1	dapper homolog 1, antagonist of beta-catenin (xenopus)	0.014
cdx4	caudal type homeo box transcription factor 4	0.013
tgfbi	transforming growth factor, beta-induced	0.013
otx5	orthodenticle homolog 5	0.013
mych	myelocytomatosis oncogene homolog	0.013
LOC100332039	ectonucleotide pyrophosphatase/phosphodiesterase family member 2-like	0.013
klf2a	Kruppel-like factor 2a	0.013
znf703	zinc finger protein 703	0.013
trpv4	transient receptor potential cation channel, subfamily V, member 4	0.013
crabp2a	cellular retinoic acid binding protein 2, a	0.013
ef1a	elongation factor 1-alpha	0.012
axin1	axin 1	0.012
hes6	hairy and enhancer of split 6 (Drosophila)	0.012
prtga	protogenin homolog a (Gallus gallus)	0.012
barx2	BarH-like homeobox 2	0.012
cdh1	cadherin 1, epithelial	0.012
hoxc8a	homeo box C8a	0.012
oxtl	oxytocin-like	0.012
chd7	chromodomain helicase DNA binding protein 7	0.012
her6	hairy-related 6	0.012
hmgb1b	high-mobility group box 1b	0.012
tph2	tryptophan hydroxylase 2 (tryptophan 5-monooxygenase)	0.012
wnt2ba	wingless-type MMTV integration site family, member 2Ba	0.012
gja3	gap junction protein, alpha 3	0.012
znf503	zinc finger protein 503	0.012
gad2	glutamate decarboxylase 2	0.011
lhx1b	LIM homeobox 1b	0.011	Mouse
tbx6	T-box gene 6	0.011
ntn1b	netrin 1b	0.011
pmp22a	peripheral myelin protein 22a	0.011
hoxa13a	homeo box A13a	0.011
tgfb2	transforming growth factor, beta 2	0.011
sox9a	SRY-box containing gene 9a	0.011
rerea	arginine-glutamic acid dipeptide (RE) repeats a	0.011
fn1	fibronectin 1	0.011
mesp2	mesoderm posterior 2 homolog (mouse)	0.011
her3	hairy-related 3	0.011
cfl2l	cofilin 2, like	0.011
hlxb9la	homeo box HB9 like a	0.011
her8a	hairy-related 8a	0.011
tbx1	T-box 1	0.010
chrna2a	cholinergic receptor, nicotinic, alpha polypeptide 2a (neuronal)	0.010
epha7	eph receptor A7	0.010
satb2	SATB homeobox 2	0.010
efna2	ephrin A2	0.010
nog2	noggin 2	0.010
sox21b	SRY-box containing gene 21 b	0.010
irx3a	iroquois homeobox protein 3a	0.010
cct5	chaperonin containing TCP1, subunit 5 (epsilon)	0.010
gli3	GLI-Kruppel family member GLI3	0.010
sulf1	sulfatase 1	0.010
appl1	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	0.010
hey1	hairy/enhancer-of-split related with YRPW motif 1	0.010
hhip	hedgehog interacting protein	0.010
dab1a	disabled homolog 1a (Drosophila)	0.010
eng2a	engrailed 2a	0.010
ren	renin	0.010
sfrp1a	secreted frizzled-related protein 1a	0.010