Process View
The network for 'negative regulation of gene silencing' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.
Any process that decreases the rate, frequency, or extent of gene silencing, the transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation.
Name | Description | Probability | Func Analog Organism |
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Name | Description | Probability | Func Analog Organism |
---|---|---|---|
pcna | proliferating cell nuclear antigen | 0.036 | |
nanos3 | nanos homolog 3 | 0.031 | |
buc | bucky ball | 0.028 | |
otul | OTU like protein | 0.020 | |
rrm1 | ribonucleotide reductase M1 polypeptide | 0.017 | |
dnmt7 | DNA (cytosine-5-)-methyltransferase 7 | 0.016 | |
zgc:113210 | zgc:113210 | 0.015 | |
spsb4a | splA/ryanodine receptor domain and SOCS box containing 4a | 0.015 | |
ap2a1 | adaptor-related protein complex 2, alpha 1 subunit | 0.015 | |
si:ch1073-351m12.1 | si:ch1073-351m12.1 | 0.014 | |
mcm4 | MCM4 minichromosome maintenance deficient 4, mitotin (S. cerevisiae) | 0.013 | |
vasa | vasa homolog | 0.013 | |
ppp1cbl | protein phosphatase 1, catalytic subunit, beta isoform, like | 0.012 | |
piwil1 | piwi-like 1 (Drosophila) | 0.012 | |
sybu | syntabulin (syntaxin-interacting) | 0.011 | |
tdrd7 | tudor domain containing 7 | 0.010 | |
msh2 | mutS homolog 2 (E. coli) | 0.010 | |
ca15b | carbonic anhydrase XV b | 0.010 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
SP1 | Sp1 transcription factor | 0.090 | |
SMAD4 | SMAD family member 4 | 0.079 | |
SMARCC1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 | 0.051 | |
NCOR1 | nuclear receptor corepressor 1 | 0.031 | |
PBRM1 | polybromo 1 | 0.030 | |
UBE2I | ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast) | 0.030 | |
ARID2 | AT rich interactive domain 2 (ARID, RFX-like) | 0.028 | |
SMARCE1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 | 0.026 | |
MBD1 | methyl-CpG binding domain protein 1 | 0.016 | |
SMARCC2 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 | 0.013 | |
EP300 | E1A binding protein p300 | 0.013 | |
ARID1A | AT rich interactive domain 1A (SWI-like) | 0.012 | |
SMARCA4 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 | 0.011 | |
DHX30 | DEAH (Asp-Glu-Ala-His) box polypeptide 30 | 0.011 | |
WWP2 | WW domain containing E3 ubiquitin protein ligase 2 | 0.011 | |
BCOR | BCL6 corepressor | 0.011 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
Sall4 | sal-like 4 (Drosophila) | 0.914 | |
Suds3 | suppressor of defective silencing 3 homolog (S. cerevisiae) | 0.569 | |
Arid1a | AT rich interactive domain 1A (SWI-like) | 0.562 | |
Nanog | Nanog homeobox | 0.403 | |
Hdac1 | histone deacetylase 1 | 0.227 | |
Tcfcp2l1 | transcription factor CP2-like 1 | 0.217 | |
Smarca4 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 | 0.142 | |
Mcm2 | minichromosome maintenance deficient 2 mitotin (S. cerevisiae) | 0.085 | |
Ap3b1 | adaptor-related protein complex 3, beta 1 subunit | 0.078 | |
Mcm3 | minichromosome maintenance deficient 3 (S. cerevisiae) | 0.077 | |
Ncor1 | nuclear receptor co-repressor 1 | 0.066 | |
Kdm5b | lysine (K)-specific demethylase 5B | 0.066 | |
Hps4 | Hermansky-Pudlak syndrome 4 homolog (human) | 0.064 | |
Smarcc1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 | 0.062 | |
Sp1 | trans-acting transcription factor 1 | 0.058 | |
Pldn | pallidin | 0.058 | |
Smarca2 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 | 0.056 | |
Hist1h2bc | histone cluster 1, H2bc | 0.055 | |
Arid2 | AT rich interactive domain 2 (ARID, RFX-like) | 0.051 | |
Sh3gl2 | SH3-domain GRB2-like 2 | 0.049 | |
Brd4 | bromodomain containing 4 | 0.044 | |
Mcm6 | minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) | 0.042 | |
Rnf220 | ring finger protein 220 | 0.040 | |
Sap25 | sin3 associated polypeptide | 0.040 | |
Cdk2 | cyclin-dependent kinase 2 | 0.038 | |
Ep300 | E1A binding protein p300 | 0.035 | |
Lig1 | ligase I, DNA, ATP-dependent | 0.032 | |
Dnmt1 | DNA methyltransferase (cytosine-5) 1 | 0.032 | |
Sox2 | SRY-box containing gene 2 | 0.031 | |
Baz2a | bromodomain adjacent to zinc finger domain, 2A | 0.030 | |
Mta1 | metastasis associated 1 | 0.029 | |
Hdac2 | histone deacetylase 2 | 0.029 | |
Pld3 | phospholipase D family, member 3 | 0.029 | |
Ep400 | E1A binding protein p400 | 0.027 | |
Mcm4 | minichromosome maintenance deficient 4 homolog (S. cerevisiae) | 0.027 | |
Nr0b1 | nuclear receptor subfamily 0, group B, member 1 | 0.027 | |
Trp53 | transformation related protein 53 | 0.026 | |
Cdt1 | chromatin licensing and DNA replication factor 1 | 0.026 | |
Timeless | timeless homolog (Drosophila) | 0.026 | |
Muted | muted | 0.025 | |
Esrrb | estrogen related receptor, beta | 0.025 | |
Pold1 | polymerase (DNA directed), delta 1, catalytic subunit | 0.024 | |
Kdm2b | lysine (K)-specific demethylase 2B | 0.024 | |
Cnot6 | CCR4-NOT transcription complex, subunit 6 | 0.023 | |
Rcor1 | REST corepressor 1 | 0.023 | |
Pou2f1 | POU domain, class 2, transcription factor 1 | 0.023 | |
Bod1l | biorientation of chromosomes in cell division 1-like | 0.023 | |
Blnk | B-cell linker | 0.022 | |
Rad21 | RAD21 homolog (S. pombe) | 0.022 | |
Gatad2a | GATA zinc finger domain containing 2A | 0.022 | |
Gtf3c2 | general transcription factor IIIC, polypeptide 2, beta | 0.022 | |
Ccna2 | cyclin A2 | 0.022 | |
Chd4 | chromodomain helicase DNA binding protein 4 | 0.022 | |
Actn4 | actinin alpha 4 | 0.022 | |
Sall3 | sal-like 3 (Drosophila) | 0.021 | |
Pias1 | protein inhibitor of activated STAT 1 | 0.021 | |
Asxl1 | additional sex combs like 1 (Drosophila) | 0.021 | |
Foxp1 | forkhead box P1 | 0.021 | |
Parp14 | poly (ADP-ribose) polymerase family, member 14 | 0.021 | |
Rrm1 | ribonucleotide reductase M1 | 0.020 | |
Sall1 | sal-like 1 (Drosophila) | 0.020 | |
2210018M11Rik | RIKEN cDNA 2210018M11 gene | 0.020 | |
Zfp42 | zinc finger protein 42 | 0.020 | |
Pml | promyelocytic leukemia | 0.020 | |
Fzr1 | fizzy/cell division cycle 20 related 1 (Drosophila) | 0.020 | |
Crebbp | CREB binding protein | 0.019 | |
Arid3b | AT rich interactive domain 3B (BRIGHT-like) | 0.019 | |
Nisch | nischarin | 0.019 | |
Mll5 | myeloid/lymphoid or mixed-lineage leukemia 5 | 0.019 | |
Tcf3 | transcription factor 3 | 0.019 | |
Phf12 | PHD finger protein 12 | 0.019 | |
Dync1i1 | dynein cytoplasmic 1 intermediate chain 1 | 0.019 | |
Numa1 | nuclear mitotic apparatus protein 1 | 0.018 | |
Cabin1 | calcineurin binding protein 1 | 0.018 | |
Tnrc6a | trinucleotide repeat containing 6a | 0.018 | |
Hcfc1 | host cell factor C1 | 0.018 | |
Tet1 | tet oncogene 1 | 0.018 | |
Nfatc3 | nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 | 0.018 | |
Myst2 | MYST histone acetyltransferase 2 | 0.018 | |
Pum2 | pumilio 2 (Drosophila) | 0.018 | |
Smad4 | MAD homolog 4 (Drosophila) | 0.017 | |
Pmaip1 | phorbol-12-myristate-13-acetate-induced protein 1 | 0.017 | |
Tcte2 | t-complex-associated testis expressed 2 | 0.017 | |
Nipbl | Nipped-B homolog (Drosophila) | 0.017 | |
Dlgap4 | discs, large homolog-associated protein 4 (Drosophila) | 0.017 | |
Rfc5 | replication factor C (activator 1) 5 | 0.017 | |
Yy1 | YY1 transcription factor | 0.017 | |
Tk1 | thymidine kinase 1 | 0.017 | |
Mcm7 | minichromosome maintenance deficient 7 (S. cerevisiae) | 0.017 | |
Ammecr1l | AMME chromosomal region gene 1-like | 0.017 | |
Ccne1 | cyclin E1 | 0.017 | |
Atp6v0d1 | ATPase, H+ transporting, lysosomal V0 subunit D1 | 0.017 | |
Gabarap | gamma-aminobutyric acid receptor associated protein | 0.017 | |
Sycp1 | synaptonemal complex protein 1 | 0.017 | |
Flot1 | flotillin 1 | 0.016 | |
Lyst | lysosomal trafficking regulator | 0.016 | |
Prkd3 | protein kinase D3 | 0.016 | |
Actn3 | actinin alpha 3 | 0.016 | |
Maml1 | mastermind like 1 (Drosophila) | 0.016 | |
Naa11 | N(alpha)-acetyltransferase 11, NatA catalytic subunit | 0.016 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
CTI6 | Cti6p | 0.831 | |
SIN3 | Sin3p | 0.735 | |
PHO23 | Pho23p | 0.616 | |
RXT2 | Rxt2p | 0.536 | |
UME1 | Ume1p | 0.482 | |
RPD3 | Rpd3p | 0.431 | |
RNR2 | Rnr2p | 0.406 | |
SAP30 | Sap30p | 0.318 | |
SDS3 | Sds3p | 0.284 | |
NTO1 | Nto1p | 0.280 | |
FKH2 | Fkh2p | 0.254 | |
CDC6 | Cdc6p | 0.230 | |
SUM1 | Sum1p | 0.215 | |
MIG2 | Mig2p | 0.214 | |
HHT1 | Hht1p | 0.197 | |
HOS3 | Hos3p | 0.188 | |
SIR2 | Sir2p | 0.175 | |
SET3 | Set3p | 0.174 | |
UME6 | Ume6p | 0.132 | |
EAF3 | Eaf3p | 0.127 | |
RCO1 | Rco1p | 0.122 | |
AFT1 | Aft1p | 0.120 | |
HHO1 | Hho1p | 0.120 | |
ROX1 | Rox1p | 0.119 | |
ASH1 | Ash1p | 0.113 | |
SWI1 | Swi1p | 0.109 | |
MIG1 | Mig1p | 0.100 | |
HOS4 | Hos4p | 0.094 | |
SLX8 | Slx8p | 0.088 | |
ZAP1 | Zap1p | 0.086 | |
SNT1 | Snt1p | 0.082 | |
RAP1 | Rap1p | 0.081 | |
MCM3 | Mcm3p | 0.079 | |
DEF1 | Def1p | 0.077 | |
MMS21 | Mms21p | 0.074 | |
HXT3 | Hxt3p | 0.073 | |
KIC1 | Kic1p | 0.071 | |
YKR075C | hypothetical protein | 0.070 | |
MIG3 | Mig3p | 0.068 | |
YML082W | hypothetical protein | 0.068 | |
AGP2 | Agp2p | 0.066 | |
NRG1 | Nrg1p | 0.066 | |
SLX5 | Slx5p | 0.065 | |
SIR4 | Sir4p | 0.061 | |
IRA2 | Ira2p | 0.059 | |
HHF2 | Hhf2p | 0.058 | |
SAN1 | San1p | 0.057 | |
YLR455W | hypothetical protein | 0.053 | |
RAD51 | Rad51p | 0.051 | |
IXR1 | Ixr1p | 0.051 | |
YGR126W | hypothetical protein | 0.048 | |
YKU70 | Yku70p | 0.048 | |
HOS2 | Hos2p | 0.048 | |
YLR278C | hypothetical protein | 0.047 | |
LYS5 | Lys5p | 0.046 | |
HAL5 | Hal5p | 0.046 | |
RXT3 | Rxt3p | 0.044 | |
YOR390W | hypothetical protein | 0.044 | |
OPI1 | Opi1p | 0.044 | |
CAT8 | Cat8p | 0.041 | |
STE7 | Ste7p | 0.040 | |
SRP54 | Srp54p | 0.039 | |
SIW14 | Siw14p | 0.039 | |
RGT1 | Rgt1p | 0.038 | |
HO | Hop | 0.038 | |
HDA3 | Hda3p | 0.037 | |
TYW1 | Tyw1p | 0.037 | |
DOT6 | Dot6p | 0.036 | |
STH1 | Sth1p | 0.036 | |
HIR2 | Hir2p | 0.036 | |
YMR259C | hypothetical protein | 0.036 | |
SFL1 | Sfl1p | 0.035 | |
MPT5 | Mpt5p | 0.034 | |
TRA1 | Tra1p | 0.034 | |
YDL156W | hypothetical protein | 0.034 | |
YCL042W | hypothetical protein | 0.034 | |
NDD1 | Ndd1p | 0.033 | |
ATG15 | Atg15p | 0.033 | |
DED1 | Ded1p | 0.033 | |
HDA2 | Hda2p | 0.033 | |
UBP8 | Ubp8p | 0.033 | |
TBS1 | Tbs1p | 0.032 | |
IFH1 | Ifh1p | 0.031 | |
YKL187C | hypothetical protein | 0.031 | |
HMO1 | Hmo1p | 0.030 | |
MOT1 | Mot1p | 0.029 | |
SNA4 | Sna4p | 0.029 | |
RMA1 | Rma1p | 0.028 | |
GAT2 | Gat2p | 0.028 | |
GCR2 | Gcr2p | 0.028 | |
ARP8 | Arp8p | 0.027 | |
NFI1 | Nfi1p | 0.027 | |
MET28 | Met28p | 0.027 | |
GIC1 | Gic1p | 0.026 | |
DEP1 | Dep1p | 0.026 | |
IRC23 | Irc23p | 0.026 | |
POG1 | Pog1p | 0.026 | |
NUP1 | Nup1p | 0.026 | |
HXT1 | Hxt1p | 0.025 | |
RTF1 | Rtf1p | 0.025 |