The network for 'ncrna 3 end processing' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

ncrna 3 end processing

Any process involved in forming the mature 3' end of a non-coding RNA molecule.

Saccharomyces cerevisiae
Name Description Probability Func Analog Organism
RRP6 Rrp6p 1.000
CSL4 Csl4p 0.997
RRP46 Rrp46p 0.996
RRP45 Rrp45p 0.991
MPP6 Mpp6p 0.959
NRD1 Nrd1p 0.955
AIR2 Air2p 0.941
SEN1 Sen1p 0.933
MTR3 Mtr3p 0.923
SKI7 Ski7p 0.921
RRP43 Rrp43p 0.921
PAP2 Pap2p 0.891
RRP40 Rrp40p 0.845
SKI6 Ski6p 0.832
RRP42 Rrp42p 0.802
LRP1 Lrp1p 0.616
RRP4 Rrp4p 0.606
NOP10 Nop10p 0.603
AIR1 Air1p 0.593
DIS3 Dis3p 0.570
RIO1 Rio1p 0.467
STO1 Sto1p 0.467
MTR4 Mtr4p 0.453
PTI1 Pti1p 0.441
FIP1 Fip1p 0.421
NAB3 Nab3p 0.413
GAR1 Gar1p 0.294
PTA1 Pta1p 0.233
NOP56 Nop56p 0.232
NHP2 Nhp2p 0.225
CTR9 Ctr9p 0.215
LEO1 Leo1p 0.189
YSH1 Ysh1p 0.181
IMD4 Imd4p 0.166
PRP43 Prp43p 0.165
TRL1 Trl1p 0.162
RNA14 Rna14p 0.150
CFT2 Cft2p 0.139
REF2 Ref2p 0.138
TMA23 Tma23p 0.134
RPO21 Rpo21p 0.127
NPL3 Npl3p 0.124
PAP1 Pap1p 0.109
RPS21A Rps21ap 0.108
PCL9 Pcl9p 0.101
SWD2 Swd2p 0.101
DBP5 Dbp5p 0.100
MPE1 Mpe1p 0.099
RNT1 Rnt1p 0.093
SPT5 Spt5p 0.083
PUB1 Pub1p 0.072
SKI3 Ski3p 0.071
HIT1 Hit1p 0.068
MOT2 Mot2p 0.067
YHB1 Yhb1p 0.066
YRA1 Yra1p 0.065
PFS2 Pfs2p 0.064
APN1 Apn1p 0.060
PAF1 Paf1p 0.057
GLN1 Gln1p 0.057
RPL37A Rpl37ap 0.057
GLE2 Gle2p 0.057
URA1 Ura1p 0.056
NOP8 Nop8p 0.056
TMA46 Tma46p 0.054
YLR264C-A hypothetical protein 0.053
SRD1 Srd1p 0.053
CTK2 Ctk2p 0.052
TRM8 Trm8p 0.048
CUP1-1 Cup1-1p 0.048
YIR035C hypothetical protein 0.048
NUT2 Nut2p 0.048
RNH70 Rnh70p 0.046
PRP28 Prp28p 0.046
FSH1 Fsh1p 0.046
CFT1 Cft1p 0.045
GBP2 Gbp2p 0.044
NUP49 Nup49p 0.044
YOL038C-A hypothetical protein 0.044
PRS2 Prs2p 0.044
NHA1 Nha1p 0.043
LEU2 Leu2p 0.043
HO Hop 0.043
URA3 Ura3p 0.043
OPI1 Opi1p 0.043
RAT1 Rat1p 0.042
MAK10 Mak10p 0.042
IMD3 Imd3p 0.042
ARG8 Arg8p 0.042
CDC19 Cdc19p 0.042
URB2 Urb2p 0.041
DBP3 Dbp3p 0.041
YLR162W hypothetical protein 0.040
REX2 Rex2p 0.040
MER1 Mer1p 0.039
BDF2 Bdf2p 0.038
RPS18B Rps18bp 0.038
SSU72 Ssu72p 0.038
PCT1 Pct1p 0.037
RRP15 Rrp15p 0.037
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Caenorhabditis elegans
Name Description Probability Func Analog Organism
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Danio rerio
Name Description Probability Func Analog Organism
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Drosophila melanogaster
Name Description Probability Func Analog Organism
CG8211 CG8211 gene product from transcript CG8211-RA 0.252
flfl falafel 0.227
cdc16 CG6759 gene product from transcript CG6759-RA 0.209
l(1)G0020 lethal (1) G0020 0.207
CG7339 CG7339 gene product from transcript CG7339-RA 0.193
Rrp4 CG3931 gene product from transcript CG3931-RA 0.183
l(1)G0222 lethal (1) G0222 0.174
Rae1 CG9862 gene product from transcript CG9862-RA 0.162
CG6724 CG6724 gene product from transcript CG6724-RA 0.157
CG4849 CG4849 gene product from transcript CG4849-RA 0.149
l(2)37Cb lethal (2) 37Cb 0.131
l(1)G0004 lethal (1) G0004 0.121
MED25 Mediator complex subunit 25 0.114
defl deflated 0.111
Aats-met Methionyl-tRNA synthetase 0.101
pcm pacman 0.098
enc encore 0.092
Taf5 TBP-associated factor 5 0.079
CG2260 CG2260 gene product from transcript CG2260-RA 0.076
CG7239 CG7239 gene product from transcript CG7239-RA 0.076
CG11071 CG11071 gene product from transcript CG11071-RA 0.066
CG6937 CG6937 gene product from transcript CG6937-RA 0.065
CG6841 CG6841 gene product from transcript CG6841-RA 0.061
Ski6 CG15481 gene product from transcript CG15481-RA 0.058
Cpsf100 Cleavage and polyadenylation specificity factor 100 0.056
spn-B spindle B 0.055
CG16941 CG16941 gene product from transcript CG16941-RA 0.052
DNApol-delta DNA-polymerase-delta 0.050
Sas10 CG4202 gene product from transcript CG4202-RA 0.050
CG5591 CG5591 gene product from transcript CG5591-RA 0.047
CG8003 CG8003 gene product from transcript CG8003-RA 0.045
Ntf-2 Nuclear transport factor-2 0.045
Art8 Arginine methyltransferase 8 0.045
omd oocyte maintenance defects 0.042
Dcp-1 Death caspase-1 0.040
RpIII128 RNA polymerase III 128kD subunit 0.039
CG1542 CG1542 gene product from transcript CG1542-RA 0.038
CG6066 CG6066 gene product from transcript CG6066-RA 0.038
Sym Symplekin 0.038
Dis3 CG6413 gene product from transcript CG6413-RA 0.035
CG14544 CG14544 gene product from transcript CG14544-RA 0.033
CG6194 CG6194 gene product from transcript CG6194-RA 0.032
Dsor1 Downstream of raf1 0.032
Nup133 Nucleoporin 133 0.031
CG9300 CG9300 gene product from transcript CG9300-RA 0.031
CG12499 CG12499 gene product from transcript CG12499-RA 0.029
Prx6005 Peroxiredoxin 6005 0.029
MED17 Mediator complex subunit 17 0.028
CG9667 CG9667 gene product from transcript CG9667-RA 0.028
mtrm matrimony 0.028
CG1671 CG1671 gene product from transcript CG1671-RA 0.027
CG7609 CG7609 gene product from transcript CG7609-RB 0.027
Prat Phosphoribosylamidotransferase 0.026
CG7275 CG7275 gene product from transcript CG7275-RA 0.026
CG5222 CG5222 gene product from transcript CG5222-RA 0.026
Prp19 CG5519 gene product from transcript CG5519-RA 0.025
kto kohtalo 0.024
CG6729 CG6729 gene product from transcript CG6729-RA 0.024
Gmer GDP-4-keto-6-deoxy-D-mannose 3,5-epimerase/4-reductase 0.023
CG6227 CG6227 gene product from transcript CG6227-RA 0.023
Mcm6 Minichromosome maintenance 6 0.023
CG10463 CG10463 gene product from transcript CG10463-RA 0.023
Rcp Receptor component protein 0.023
alphaTub84B alpha-Tubulin at 84B 0.022
Elp3 Elongator complex protein 3 0.020
CG1737 CG1737 gene product from transcript CG1737-RA 0.020
PTP-ER Protein tyrosine phosphatase-ERK/Enhancer of Ras1 0.019
wun2 wunen-2 0.019
CG14434 CG14434 gene product from transcript CG14434-RA 0.019
CG1575 CG1575 gene product from transcript CG1575-RA 0.018
Nipped-B CG17704 gene product from transcript CG17704-RI 0.018
MED14 Mediator complex subunit 14 0.018
tay tay bridge 0.018
RpII33 RNA polymerase II 33kD subunit 0.017
CG31224 CG31224 gene product from transcript CG31224-RA 0.017
CG2091 CG2091 gene product from transcript CG2091-RA 0.017
CG9346 CG9346 gene product from transcript CG9346-RA 0.017
CG6734 CG6734 gene product from transcript CG6734-RA 0.016
CG33332 CG33332 gene product from transcript CG33332-RA 0.016
DNApol-alpha50 DNA polymerase alpha 50kD 0.016
noi noisette 0.016
nopo no poles 0.016
CG3634 CG3634 gene product from transcript CG3634-RA 0.016
Nup107 Nucleoporin 107 0.016
CG6133 CG6133 gene product from transcript CG6133-RA 0.015
CG3173 CG3173 gene product from transcript CG3173-RA 0.015
CG10880 CG10880 gene product from transcript CG10880-RA 0.015
CG4980 CG4980 gene product from transcript CG4980-RA 0.015
Cpsf73 Cleavage and polyadenylation specificity factor 73 0.015
CG7728 CG7728 gene product from transcript CG7728-RA 0.015
l(3)S147910 lethal (3) S147910 0.014
CG3434 CG3434 gene product from transcript CG3434-RA 0.014
CG16908 CG16908 gene product from transcript CG16908-RA 0.014
l(2)37Cg lethal (2) 37Cg 0.014
CG8435 CG8435 gene product from transcript CG8435-RA 0.014
TppII tripeptidyl-peptidase II 0.014
Mat89Ba Maternal transcript 89Ba 0.014
Psf3 CG2222 gene product from transcript CG2222-RA 0.014
CstF-64 Cleavage stimulation factor 64 kilodalton subunit 0.014
CG8611 CG8611 gene product from transcript CG8611-RA 0.014
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Homo sapiens
Name Description Probability Func Analog Organism
EXOSC3 exosome component 3 0.996
DIS3L DIS3 mitotic control homolog (S. cerevisiae)-like 0.877
EXOSC7 exosome component 7 0.873
EXOSC4 exosome component 4 0.703
EXOSC10 exosome component 10 0.588
EXOSC2 exosome component 2 0.362
EXOSC8 exosome component 8 0.303
EXOSC1 exosome component 1 0.190
CDK8 cyclin-dependent kinase 8 0.146
MED10 mediator complex subunit 10 0.139
EXOSC5 exosome component 5 0.112
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 0.103
DIS3 DIS3 mitotic control homolog (S. cerevisiae) 0.094
MED29 mediator complex subunit 29 0.056
EXOSC9 exosome component 9 0.056
RTF1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 0.054
RBMX RNA binding motif protein, X-linked 0.035
MED6 mediator complex subunit 6 0.031
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 0.030
MED14 mediator complex subunit 14 0.028
HNRNPF heterogeneous nuclear ribonucleoprotein F 0.024
CDC73 cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 0.023
MED26 mediator complex subunit 26 0.023
MED18 mediator complex subunit 18 0.023
MED23 mediator complex subunit 23 0.022
ASCC2 activating signal cointegrator 1 complex subunit 2 0.022
MED12 mediator complex subunit 12 0.022
DDX21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 0.020
MPHOSPH6 M-phase phosphoprotein 6 0.019
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 0.017
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.017
RANBP1 RAN binding protein 1 0.016
AEBP2 AE binding protein 2 0.016
CUX1 cut-like homeobox 1 0.016
MED30 mediator complex subunit 30 0.015
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.015
XRN2 5'-3' exoribonuclease 2 0.014
SHQ1 SHQ1 homolog (S. cerevisiae) 0.014
TP63 tumor protein p63 0.014
MED16 mediator complex subunit 16 0.014
CCNH cyclin H 0.013
MED28 mediator complex subunit 28 0.013
TCEA1 transcription elongation factor A (SII), 1 0.013
EIF3D eukaryotic translation initiation factor 3, subunit D 0.012
PCID2 PCI domain containing 2 0.012
RPL8 ribosomal protein L8 0.012
MED17 mediator complex subunit 17 0.012
MED1 mediator complex subunit 1 0.012
YBX1 Y box binding protein 1 0.011
C19orf2 chromosome 19 open reading frame 2 0.011
LMO3 LIM domain only 3 (rhombotin-like 2) 0.011
TUBA1B tubulin, alpha 1b 0.010
DPCD deleted in primary ciliary dyskinesia homolog (mouse) 0.010
UBE2I ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast) 0.010
CELF1 CUGBP, Elav-like family member 1 0.010
CDK5RAP1 CDK5 regulatory subunit associated protein 1 0.010
UBA6 ubiquitin-like modifier activating enzyme 6 0.010
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Mus musculus
Name Description Probability Func Analog Organism
Elp2 elongation protein 2 homolog (S. cerevisiae) 0.204
Nono non-POU-domain-containing, octamer binding protein 0.172
Ctcf CCCTC-binding factor 0.102
Ythdf1 YTH domain family 1 0.077
Mlh1 mutL homolog 1 (E. coli) 0.066
Polr2b polymerase (RNA) II (DNA directed) polypeptide B 0.065
Emg1 EMG1 nucleolar protein homolog (S. cerevisiae) 0.063
D10Wsu52e DNA segment, Chr 10, Wayne State University 52, expressed 0.059
Wdr61 WD repeat domain 61 0.058
Ncbp2 nuclear cap binding protein subunit 2 0.056
Psmg2 proteasome (prosome, macropain) assembly chaperone 2 0.048
Tdp2 tyrosyl-DNA phosphodiesterase 2 0.044
Cse1l chromosome segregation 1-like (S. cerevisiae) 0.042
Ercc3 excision repair cross-complementing rodent repair deficiency, complementation group 3 0.040
B230308N11Rik RIKEN cDNA B230308N11 gene 0.038
2400003C14Rik RIKEN cDNA 2400003C14 gene 0.036
Eefsec eukaryotic elongation factor, selenocysteine-tRNA-specific 0.035
Fastkd5 FAST kinase domains 5 0.035
Osbpl11 oxysterol binding protein-like 11 0.035
Msh6 mutS homolog 6 (E. coli) 0.034
BC018507 cDNA sequence BC018507 0.032
D15Ertd621e DNA segment, Chr 15, ERATO Doi 621, expressed 0.031
Cpsf1 cleavage and polyadenylation specific factor 1 0.030
Cstf2t cleavage stimulation factor, 3' pre-RNA subunit 2, tau 0.029
Tmem131 transmembrane protein 131 0.029
Tada1 transcriptional adaptor 1 0.027
Eed embryonic ectoderm development 0.025
Ttc27 tetratricopeptide repeat domain 27 0.024
Med23 mediator complex subunit 23 0.024
Ruvbl1 RuvB-like protein 1 0.023
Parp2 poly (ADP-ribose) polymerase family, member 2 0.023
Api5 apoptosis inhibitor 5 0.023
Xpot exportin, tRNA (nuclear export receptor for tRNAs) 0.022
Ilf3 interleukin enhancer binding factor 3 0.021
Nsmce4a non-SMC element 4 homolog A (S. cerevisiae) 0.021
Dido1 death inducer-obliterator 1 0.021
Armc10 armadillo repeat containing 10 0.020
Rpusd4 RNA pseudouridylate synthase domain containing 4 0.020
Dhx16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 0.020
Wtap Wilms' tumour 1-associating protein 0.019
Nanog Nanog homeobox 0.019
Polr1c polymerase (RNA) I polypeptide C 0.019
Ppp1cc protein phosphatase 1, catalytic subunit, gamma isoform 0.018
Rexo4 REX4, RNA exonuclease 4 homolog (S. cerevisiae) 0.018
Mettl3 methyltransferase like 3 0.018
Xab2 XPA binding protein 2 0.018
Gtf3a general transcription factor III A 0.018
Naa35 N(alpha)-acetyltransferase 35, NatC auxiliary subunit 0.017
Impa1 inositol (myo)-1(or 4)-monophosphatase 1 0.017
Scaf11 SR-related CTD-associated factor 11 0.017
Tubgcp3 tubulin, gamma complex associated protein 3 0.017
Sf3b2 splicing factor 3b, subunit 2 0.017
Prpsap2 phosphoribosyl pyrophosphate synthetase-associated protein 2 0.017
Ttc13 tetratricopeptide repeat domain 13 0.017
Nlk nemo like kinase 0.017
Pdcd2 programmed cell death 2 0.017
Ints4 integrator complex subunit 4 0.016
Myg1 melanocyte proliferating gene 1 0.016
Nxf1 nuclear RNA export factor 1 homolog (S. cerevisiae) 0.016
Prpf6 PRP6 pre-mRNA splicing factor 6 homolog (yeast) 0.016
Zranb2 zinc finger, RAN-binding domain containing 2 0.016
Prmt5 protein arginine N-methyltransferase 5 0.016
Rbm10 RNA binding motif protein 10 0.016
Pitpnb phosphatidylinositol transfer protein, beta 0.016
Vps16 vacuolar protein sorting 16 (yeast) 0.016
Max Max protein 0.015
Ireb2 iron responsive element binding protein 2 0.015
Hnrpll heterogeneous nuclear ribonucleoprotein L-like 0.015
Rnf145 ring finger protein 145 0.015
Hnrnpk heterogeneous nuclear ribonucleoprotein K 0.015
Supt5h suppressor of Ty 5 homolog (S. cerevisiae) 0.014
Pik3r4 phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150 0.014
Lars leucyl-tRNA synthetase 0.014
Prkd3 protein kinase D3 0.014
Atf1 activating transcription factor 1 0.014
Ctnnbl1 catenin, beta like 1 0.014
Rbm14 RNA binding motif protein 14 0.014
Chordc1 cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 0.014
Kars lysyl-tRNA synthetase 0.014
Tars2 threonyl-tRNA synthetase 2, mitochondrial (putative) 0.014
Chd1 chromodomain helicase DNA binding protein 1 0.014
Ythdc1 YTH domain containing 1 0.014
Prpf8 pre-mRNA processing factor 8 0.013
Parg poly (ADP-ribose) glycohydrolase 0.013
Ube2n ubiquitin-conjugating enzyme E2N 0.013
Ilf2 interleukin enhancer binding factor 2 0.013
Srsf1 serine/arginine-rich splicing factor 1 0.013
Gins4 GINS complex subunit 4 (Sld5 homolog) 0.013
Prpsap1 phosphoribosyl pyrophosphate synthetase-associated protein 1 0.013
Ppp1r7 protein phosphatase 1, regulatory (inhibitor) subunit 7 0.013
Aggf1 angiogenic factor with G patch and FHA domains 1 0.013
Smu1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) 0.013
Nudt21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 0.013
Ints3 integrator complex subunit 3 0.013
Rfwd3 ring finger and WD repeat domain 3 0.012
Fam168b family with sequence similarity 168, member B 0.012
Spin1 spindlin 1 0.012
Gtl3 gene trap locus 3 0.012
Crlf3 cytokine receptor-like factor 3 0.012
Cdk9 cyclin-dependent kinase 9 (CDC2-related kinase) 0.012
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Rattus norvegicus
Name Description Probability Func Analog Organism