The network for 'positive regulation of rna metabolic process' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

positive regulation of rna metabolic process

Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving RNA.

Saccharomyces cerevisiae
Name Description Probability Func Analog Organism
GLN3 Gln3p 0.992
HOG1 Hog1p 0.990
YAP1 Yap1p 0.988
SWI6 Swi6p 0.986
SIN3 Sin3p 0.977
SNF6 Snf6p 0.971
GAL11 Gal11p 0.965
MSN2 Msn2p 0.965
SRB4 Srb4p 0.956
CYC8 Cyc8p 0.953
ADA2 Ada2p 0.947
YTA7 Yta7p 0.945
HMO1 Hmo1p 0.937
RIM101 Rim101p 0.933
RTG3 Rtg3p 0.933
SSN3 Ssn3p 0.929
SNF5 Snf5p 0.926
MKS1 Mks1p 0.925
CDC28 Cdc28p 0.911
RPD3 Rpd3p 0.895
SNF2 Snf2p 0.895
CTI6 Cti6p 0.893
CHD1 Chd1p 0.887
SSN2 Ssn2p 0.886
AFT1 Aft1p 0.848
CTR9 Ctr9p 0.847
CTK3 Ctk3p 0.841
YAK1 Yak1p 0.830
SPT8 Spt8p 0.826
SRB5 Srb5p 0.820
RTF1 Rtf1p 0.818
FKH2 Fkh2p 0.809
PGD1 Pgd1p 0.807
RGR1 Rgr1p 0.806
SWI1 Swi1p 0.788
CCR4 Ccr4p 0.756
HAP5 Hap5p 0.751
GCN5 Gcn5p 0.749
MSN4 Msn4p 0.746
SKO1 Sko1p 0.743
HHT1 Hht1p 0.738
SSN8 Ssn8p 0.737
RAP1 Rap1p 0.727
RXT2 Rxt2p 0.706
SPT15 Spt15p 0.704
NUP157 Nup157p 0.698
MET4 Met4p 0.696
SWI5 Swi5p 0.694
SDS3 Sds3p 0.687
PHO23 Pho23p 0.677
DOT6 Dot6p 0.667
RPT6 Rpt6p 0.657
CDC6 Cdc6p 0.651
NRG1 Nrg1p 0.648
SPT5 Spt5p 0.634
KSS1 Kss1p 0.625
CGI121 Cgi121p 0.620
CAT8 Cat8p 0.618
TAF5 Taf5p 0.614
RPN4 Rpn4p 0.610
FKH1 Fkh1p 0.607
UBP6 Ubp6p 0.600
ATG1 Atg1p 0.591
ARG81 Arg81p 0.583
CLB5 Clb5p 0.581
SPT7 Spt7p 0.580
HAP4 Hap4p 0.579
MED6 Med6p 0.575
SPP1 Spp1p 0.574
YKE2 Yke2p 0.573
PCC1 Pcc1p 0.568
SAP30 Sap30p 0.564
CRZ1 Crz1p 0.559
UTP7 Utp7p 0.557
MED1 Med1p 0.557
SET3 Set3p 0.550
SNF1 Snf1p 0.549
AHC1 Ahc1p 0.546
TAF14 Taf14p 0.542
VPS27 Vps27p 0.539
IXR1 Ixr1p 0.538
PSH1 Psh1p 0.533
MTR10 Mtr10p 0.529
CPR1 Cpr1p 0.526
GAL4 Gal4p 0.525
CDC55 Cdc55p 0.523
ROX3 Rox3p 0.514
NUP100 Nup100p 0.511
HTB1 Htb1p 0.487
POP2 Pop2p 0.484
TUP1 Tup1p 0.483
YLR455W hypothetical protein 0.482
DHH1 Dhh1p 0.482
LSM1 Lsm1p 0.476
SRB2 Srb2p 0.476
MDS3 Mds3p 0.470
ARP8 Arp8p 0.469
ROX1 Rox1p 0.468
RVB2 Rvb2p 0.465
LEU3 Leu3p 0.464
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Caenorhabditis elegans
Name Description Probability Func Analog Organism
pha-4 Protein PHA-4 0.999
elt-6 Protein ELT-6 0.998
vab-3 Protein VAB-3 0.997
egl-18 Protein EGL-18 0.996
nhr-49 Protein NHR-49 0.979
nhr-67 Protein NHR-67 0.955
hlh-2 Protein HLH-2 0.938
set-1 Protein SET-1 0.841
daf-1 Protein DAF-1 0.805
cnd-1 Protein CND-1 0.763
egl-46 Protein EGL-46 0.737
fkh-2 Protein FKH-2 0.701
eya-1 Protein EYA-1 0.677
zip-7 Protein ZIP-7 0.655
egl-44 Protein EGL-44 0.624
mls-2 Protein MLS-2 0.599
mep-1 Protein MEP-1 0.598
unc-42 Protein UNC-42 0.597
F33H1.4 Protein F33H1.4 0.573
pop-1 Protein POP-1 0.569
cam-1 Protein CAM-1 0.548
nhr-2 Protein NHR-2 0.543
tag-260 Protein TAG-260 0.541
rpt-3 Protein RPT-3 0.529
hmg-1.2 Protein HMG-1.2 0.523
soc-2 Protein SOC-2 0.519
hbl-1 Protein HBL-1 0.519
lst-3 Protein LST-3 0.515
nhr-34 Protein NHR-34 0.504
tbx-8 Protein TBX-8 0.503
ceh-20 Protein CEH-20 0.501
rad-26 Protein RAD-26 0.482
unc-62 Protein UNC-62 0.481
pry-1 Protein PRY-1 0.476
sas-4 Protein SAS-4 0.459
C56G2.7 Protein C56G2.7 0.454
ceh-16 Protein CEH-16 0.445
lin-12 Protein LIN-12 0.445
ceh-34 Protein CEH-34 0.442
hrp-1 Protein HRP-1 0.442
unc-37 Protein UNC-37 0.441
Y102A11A.6 Protein Y102A11A.6 0.422
tbx-9 Protein TBX-9 0.414
abi-1 Protein ABI-1 0.410
pbrm-1 Protein PBRM-1 0.403
tax-4 Protein TAX-4 0.396
cfim-2 Protein CFIM-2 0.392
wrm-1 Protein WRM-1 0.390
egl-13 Protein EGL-13 0.388
sma-3 Protein SMA-3 0.378
lin-35 Protein LIN-35 0.376
ksr-1 Protein KSR-1 0.376
gei-4 Protein GEI-4 0.372
his-5 Protein HIS-5 0.371
nhr-6 Protein NHR-6 0.352
crm-1 Protein CRM-1 0.347
ztf-2 Protein ZTF-2 0.343
saeg-1 Protein SAEG-1 0.342
apl-1 Protein APL-1 0.337
dpf-3 Protein DPF-3 0.333
acin-1 Protein ACIN-1 0.330
unc-73 Protein UNC-73 0.327
mat-3 Protein MAT-3 0.320
nhr-25 Protein NHR-25 0.320
bet-1 Protein BET-1 0.320
pkg-1 Protein PKG-1 0.311
F54C8.4 Protein F54C8.4 0.308
mab-5 Protein MAB-5 0.301
zfp-3 Protein ZFP-3 0.294
mel-28 Protein MEL-28 0.286
mix-1 Protein MIX-1 0.281
lsy-22 Protein LSY-22 0.278
rha-2 Protein RHA-2 0.273
hda-3 Protein HDA-3 0.269
lin-17 Protein LIN-17 0.268
bar-1 Protein BAR-1 0.267
lntl-1 Protein LNTL-1 0.260
lag-1 Protein LAG-1 0.258
ced-9 Protein CED-9 0.247
skp-1 Protein SKP-1 0.247
ceh-27 Protein CEH-27 0.246
mig-5 Protein MIG-5 0.240
efl-1 Protein EFL-1 0.240
hlh-14 Protein HLH-14 0.236
ing-3 Protein ING-3 0.236
daf-14 Protein DAF-14 0.232
hlh-1 Protein HLH-1 0.231
scd-1 Protein SCD-1 0.231
C18E3.5 Protein C18E3.5 0.231
pmk-1 Protein PMK-1 0.229
ldb-1 Protein LDB-1 0.227
dmd-6 Protein DMD-6 0.225
his-1 Protein HIS-1 0.223
ten-1 Protein TEN-1 0.223
ida-1 Protein IDA-1 0.221
dsh-1 Protein DSH-1 0.219
CELE_C17E4.6 Protein C17E4.6 0.219
kin-10 Protein KIN-10 0.215
CELE_C12D8.1 Protein C12D8.1 0.215
sel-2 Protein SEL-2 0.215
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Danio rerio
Name Description Probability Func Analog Organism
notch1a notch homolog 1a 0.990
chd chordin 0.952
pitx3 paired-like homeodomain transcription factor 3 0.945
flh floating head 0.940
dlx2a distal-less homeobox gene 2a 0.936
gli1 GLI-Kruppel family member 1 0.935
shha sonic hedgehog a 0.931
lhx1a LIM homeobox 1a 0.921
ndr2 nodal-related 2 0.915
tbx1 T-box 1 0.889
runx2b runt-related transcription factor 2b 0.846
eomesa eomesodermin homolog a 0.838
lmx1b.1 LIM homeobox transcription factor 1, beta 1 0.836
pitx2 paired-like homeodomain transcription factor 2 0.826
tal1 T-cell acute lymphocytic leukemia 1 0.811
fgfr4 fibroblast growth factor receptor 4 0.793
hoxb1b homeo box B1b 0.791
gata3 GATA-binding protein 3 0.778
hnf1ba HNF1 homeobox Ba 0.775
lft1 lefty1 0.771
pax9 paired box gene 9 0.749
foxa2 forkhead box A2 0.743
myod1 myogenic differentiation 1 0.742
gata5 GATA-binding protein 5 0.738
nova2 neuro-oncological ventral antigen 2 0.737
rargb retinoic acid receptor, gamma b 0.691
eya1 eyes absent homolog 1 0.688
cdx4 caudal type homeo box transcription factor 4 0.680
nkx2.2a NK2 transcription factor related 2a 0.676
hoxc4a homeo box C4a 0.672
fezf2 FEZ family zinc finger 2 0.670
tp53 tumor protein p53 0.653
tll1 tolloid-like 1 0.643
ntla no tail a 0.631
col27a1a collagen, type XXVII, alpha 1a 0.630
tcf7l2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.617
gata6 GATA-binding protein 6 0.617
hey1 hairy/enhancer-of-split related with YRPW motif 1 0.609
mecom MDS1 and EVI1 complex locus 0.607
zic1 zic family member 1 (odd-paired homolog, Drosophila) 0.576
runx2a runt-related transcription factor 2a 0.573
gdnf glial cell derived neurotrophic factor 0.562
sox1a SRY-box containing gene 1a 0.554
hand2 heart and neural crest derivatives expressed transcript 2 0.554
tbx20 T-box 20 0.550
fgfr3 fibroblast growth factor receptor 3 0.548
ascl1a achaete-scute complex-like 1a (Drosophila) 0.541
kdrl kinase insert domain receptor like 0.537
fzd5 frizzled homolog 5 0.533
pax8 paired box gene 8 0.532
mapk1 mitogen-activated protein kinase 1 0.527
pax7a paired box gene 7a 0.526
wnt5b wingless-type MMTV integration site family, member 5b 0.516
vasa vasa homolog 0.512
jag2 jagged 2 0.501
raraa retinoic acid receptor, alpha a 0.498
crabp2a cellular retinoic acid binding protein 2, a 0.495
oprk1 opioid receptor, kappa 1 0.491
oxtl oxytocin-like 0.487
foxi3a forkhead box I3a 0.487
notch3 notch homolog 3 0.486
sox32 SRY-box containing gene 32 0.482
otx2 orthodenticle homolog 2 0.482
hmx3 homeo box (H6 family) 3 0.478
bmpr1aa bone morphogenetic protein receptor, type 1aa 0.471
tp63 tumor protein p63 0.455
bsk146 brain specific kinase 146 0.448
six3b sine oculis homeobox homolog 3b 0.426
mll myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila) 0.421
igf1 insulin-like growth factor 1 0.420
gli2a GLI-Kruppel family member GLI2a 0.398
spry4 sprouty (Drosophila) homolog 4 0.398
col2a1a collagen type II, alpha-1a 0.395
esr1 estrogen receptor 1 0.384
six4b sine oculis homeobox homolog 4b 0.378
ptf1a pancreas specific transcription factor, 1a 0.377
pax3a paired box gene 3a 0.373
jag1b jagged 1b 0.370
pdlim7 PDZ and LIM domain 7 0.369
nr2e1 nuclear receptor subfamily 2, group E, member 1 0.368
spaw southpaw 0.365
oprm1 opioid receptor, mu 1 0.361
junb jun B proto-oncogene 0.333
hoxa11a homeo box A11a 0.329
igf3 insulin-like growth factor 3 0.325
znf503 zinc finger protein 503 0.322
efnb1 ephrin B1 0.318
otpa orthopedia homolog a 0.318
hoxa5a homeo box A5a 0.313
isl1 islet1 0.312
fsta follistatin a 0.311
fgf10a fibroblast growth factor 10a 0.310
mab21l2 mab-21-like 2 0.305
nr2e3 nuclear receptor subfamily 2, group E, member 3 0.303
cdkn1c cyclin-dependent kinase inhibitor 1C (p57, Kip2) 0.301
rag1 recombination activating gene 1 0.300
trim71 tripartite motif-containing 71 0.297
lhx5 LIM homeobox 5 0.291
irx1b iroquois homeobox protein 1, b 0.288
hdac1 histone deacetylase 1 0.284
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Drosophila melanogaster
Name Description Probability Func Analog Organism
ci cubitus interruptus 1.000
Egfr Epidermal growth factor receptor 1.000
wg wingless 0.999
pan pangolin 0.998
phl pole hole 0.998
lola longitudinals lacking 0.995
mor moira 0.992
eyg eyegone 0.990
E(spl) Enhancer of split 0.989
osa CG7467 gene product from transcript CG7467-RD 0.988
Akt1 CG4006 gene product from transcript CG4006-RA 0.985
sd scalloped 0.985
Ser Serrate 0.980
Snr1 Snf5-related 1 0.978
EcR Ecdysone receptor 0.978
CG11347 CG11347 gene product from transcript CG11347-RE 0.974
MED15 Mediator complex subunit 15 0.973
InR Insulin-like receptor 0.969
lwr lesswright 0.968
kay kayak 0.963
pb proboscipedia 0.963
CTCF CG8591 gene product from transcript CG8591-RA 0.959
Hrb27C Heterogeneous nuclear ribonucleoprotein at 27C 0.954
nmo nemo 0.951
Pi3K92E CG4141 gene product from transcript CG4141-RB 0.951
e(y)3 enhancer of yellow 3 0.945
eve even skipped 0.943
cnc cap-n-collar 0.943
Bre1 CG10542 gene product from transcript CG10542-RA 0.942
gro groucho 0.940
Gug Grunge 0.939
Mad Mothers against dpp 0.939
eya eyes absent 0.934
Su(H) Suppressor of Hairless 0.925
Dll Distal-less 0.923
hep hemipterous 0.921
brm brahma 0.913
ash2 absent, small, or homeotic discs 2 0.907
dsx doublesex 0.907
Med Medea 0.903
Pka-C1 cAMP-dependent protein kinase 1 0.901
trx trithorax 0.894
klu klumpfuss 0.893
CycA Cyclin A 0.893
Ubx Ultrabithorax 0.888
en engrailed 0.886
Pc Polycomb 0.878
foxo forkhead box, sub-group O 0.845
ey eyeless 0.844
slp1 sloppy paired 1 0.839
opa odd paired 0.836
sax saxophone 0.825
CG4699 CG4699 gene product from transcript CG4699-RJ 0.820
pic piccolo 0.819
dome domeless 0.816
slmb supernumerary limbs 0.815
dco discs overgrown 0.813
Sir2 CG5216 gene product from transcript CG5216-RA 0.813
gsb gooseberry 0.804
da daughterless 0.802
esg escargot 0.800
nab CG33545 gene product from transcript CG33545-RC 0.800
org-1 optomotor-blind-related-gene-1 0.798
ab abrupt 0.798
Cka Connector of kinase to AP-1 0.793
z zeste 0.790
salm spalt major 0.788
Rel Relish 0.781
por porcupine 0.776
shn schnurri 0.774
mys myospheroid 0.771
Nrg Neuroglian 0.770
trol terribly reduced optic lobes 0.769
tin tinman 0.766
Tollo CG6890 gene product from transcript CG6890-RA 0.764
ecd ecdysoneless 0.761
wds will die slowly 0.759
Rbf Retinoblastoma-family protein 0.754
pdm2 POU domain protein 2 0.748
tara taranis 0.742
SF2 CG6987 gene product from transcript CG6987-RA 0.727
Pp2B-14D Protein phosphatase 2B at 14D 0.726
Trf2 TATA box binding protein-related factor 2 0.725
heph hephaestus 0.725
dan distal antenna 0.724
Optix CG18455 gene product from transcript CG18455-RA 0.719
sty sprouty 0.706
fs(1)h female sterile (1) homeotic 0.701
sno strawberry notch 0.699
BRWD3 CG31132 gene product from transcript CG31132-RA 0.697
Chi Chip 0.697
ara araucan 0.695
Bap170 Brahma associated protein 170kD 0.694
ex expanded 0.694
hkb huckebein 0.693
Cp190 Centrosomal protein 190kD 0.693
CG10414 CG10414 gene product from transcript CG10414-RA 0.692
yki yorkie 0.691
nub nubbin 0.687
Abd-B Abdominal B 0.685
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Homo sapiens
Name Description Probability Func Analog Organism
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Mus musculus
Name Description Probability Func Analog Organism
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Rattus norvegicus
Name Description Probability Func Analog Organism
Junb jun B proto-oncogene 0.981
Rara retinoic acid receptor, alpha 0.860
Btg2 BTG family, member 2 0.839
Ppp1r15a protein phosphatase 1, regulatory (inhibitor) subunit 15A 0.805
Dusp1 dual specificity phosphatase 1 0.802
Jun Jun oncogene 0.716
Fos FBJ osteosarcoma oncogene 0.698
Atf3 activating transcription factor 3 0.642
Nr4a1 nuclear receptor subfamily 4, group A, member 1 0.597
Zfp36 zinc finger protein 36 0.592
Tgfbr2 transforming growth factor, beta receptor II 0.521
Egr1 early growth response 1 0.486
Foxa3 forkhead box A3 0.445
Fgfr2 fibroblast growth factor receptor 2 0.437
Tcfe2a transcription factor E2a 0.427
Ahr aryl hydrocarbon receptor 0.387
Adam17 ADAM metallopeptidase domain 17 0.381
Nfib nuclear factor I/B 0.380
Map3k3 mitogen activated protein kinase kinase kinase 3 0.377
Nr1d2 nuclear receptor subfamily 1, group D, member 2 0.369
Cebpb CCAAT/enhancer binding protein (C/EBP), beta 0.363
Smad1 SMAD family member 1 0.350
Stip1 stress-induced phosphoprotein 1 0.342
Nr2f2 nuclear receptor subfamily 2, group F, member 2 0.341
Lig3 ligase III, DNA, ATP-dependent 0.341
Nr4a3 nuclear receptor subfamily 4, group A, member 3 0.334
Nup88 nucleoporin 88 0.330
Cebpa CCAAT/enhancer binding protein (C/EBP), alpha 0.325
Vax2 ventral anterior homeobox 2 0.296
Psmc2 proteasome (prosome, macropain) 26S subunit, ATPase 2 0.294
Cdkn2b cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 0.290
Aqp2 aquaporin 2 (collecting duct) 0.282
Psmc1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 0.282
Errfi1 ERBB receptor feedback inhibitor 1 0.278
Cct3 chaperonin containing Tcp1, subunit 3 (gamma) 0.278
Gjb3 gap junction protein, beta 3 0.266
Grin2d glutamate receptor, ionotropic, N-methyl D-aspartate 2D 0.266
Ets1 v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) 0.265
Il8ra interleukin 8 receptor, alpha 0.262
Rps6ka1 ribosomal protein S6 kinase polypeptide 1 0.254
Phf12 PHD finger protein 12 0.250
Met met proto-oncogene 0.245
Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 0.244
Hoxd3 homeo box D3 0.241
Oxtr oxytocin receptor 0.237
Acvr1 activin A receptor, type I 0.236
Jak1 Janus kinase 1 0.235
Klf6 Kruppel-like factor 6 0.235
Erbb4 v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) 0.230
Irs3 insulin receptor substrate 3 0.229
Ddr1 discoidin domain receptor tyrosine kinase 1 0.229
Nr4a2 nuclear receptor subfamily 4, group A, member 2 0.226
Klf9 Kruppel-like factor 9 0.226
Fgfr1 Fibroblast growth factor receptor 1 0.225
Crebbp CREB binding protein 0.225
Myh9 myosin, heavy chain 9, non-muscle 0.223
Casp2 caspase 2 0.220
Ctdsp1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 0.219
Serbp1 Serpine1 mRNA binding protein 1 0.218
Ngfr nerve growth factor receptor (TNFR superfamily, member 16) 0.216
Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a 0.213
Myc myelocytomatosis oncogene 0.210
Cd86 CD86 molecule 0.209
Irs1 insulin receptor substrate 1 0.209
Pfkfb3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.209
Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.207
Irf2 interferon regulatory factor 2 0.206
Ndst1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 0.205
Lphn2 latrophilin 2 0.205
LOC684996 similar to chromosome 7 open reading frame 11 0.203
Vom2r27 vomeronasal 2 receptor, 27 0.201
Mll5 myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila) 0.201
Akap1 A kinase (PRKA) anchor protein 1 0.200
Sorbs3 sorbin and SH3 domain containing 3 0.196
Vegfa vascular endothelial growth factor A 0.190
Homer3 homer homolog 3 (Drosophila) 0.190
Jund jun D proto-oncogene 0.189
Hspb2 heat shock protein beta 2 0.189
Mprip myosin phosphatase Rho interacting protein 0.189
Acin1 apoptotic chromatin condensation inducer 1 0.189
Bat3 HLA-B-associated transcript 3 0.188
Ncr1 natural cytotoxicity triggering receptor 1 0.188
Dll3 delta-like 3 (Drosophila) 0.187
Grk1 G protein-coupled receptor kinase 1 0.186
Trim28 tripartite motif-containing 28 0.185
Ptprk protein tyrosine phosphatase, receptor type, K, extracellular region 0.183
Khsrp KH-type splicing regulatory protein 0.181
Ier3 immediate early response 3 0.179
Adam10 ADAM metallopeptidase domain 10 0.179
Kcnj1 potassium inwardly-rectifying channel, subfamily J, member 1 0.173
Hspa1a heat shock 70kD protein 1A 0.171
Galr3 galanin receptor 3 0.169
Nedd4 neural precursor cell expressed, developmentally down-regulated 4 0.164
Myadm myeloid-associated differentiation marker 0.163
Musk muscle, skeletal, receptor tyrosine kinase 0.163
Ptafr platelet-activating factor receptor 0.163
Sebox SEBOX homeobox 0.161
Rxra retinoid X receptor alpha 0.160
Lhx5 LIM homeobox 5 0.159
Tcf4 transcription factor 4 0.159