The network for 'mrna metabolic process' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

mrna metabolic process

The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.

Saccharomyces cerevisiae
Name Description Probability Func Analog Organism
BRR2 Brr2p 1.000
PRP19 Prp19p 1.000
CWC2 Cwc2p 1.000
PRP8 Prp8p 1.000
SNU114 Snu114p 1.000
SNT309 Snt309p 1.000
CUS1 Cus1p 1.000
SMD2 Smd2p 1.000
SMB1 Smb1p 1.000
CLF1 Clf1p 1.000
CEF1 Cef1p 1.000
SMD3 Smd3p 1.000
STO1 Sto1p 1.000
LEA1 Lea1p 1.000
SMD1 Smd1p 1.000
SYF1 Syf1p 1.000
RSE1 Rse1p 1.000
HSH155 Hsh155p 1.000
SMX3 Smx3p 0.999
LSM4 Lsm4p 0.998
PRP46 Prp46p 0.998
PRP6 Prp6p 0.998
LSM3 Lsm3p 0.998
RRP6 Rrp6p 0.997
DHH1 Dhh1p 0.997
YSH1 Ysh1p 0.997
ISY1 Isy1p 0.996
PRP45 Prp45p 0.996
PRP11 Prp11p 0.996
PUB1 Pub1p 0.996
BUD13 Bud13p 0.995
SMX2 Smx2p 0.994
PRP2 Prp2p 0.992
PRP4 Prp4p 0.992
PRP9 Prp9p 0.992
PAB1 Pab1p 0.991
DCP2 Dcp2p 0.990
LSM2 Lsm2p 0.990
SLU7 Slu7p 0.990
PRP31 Prp31p 0.987
NPL3 Npl3p 0.987
PRP39 Prp39p 0.986
RPO21 Rpo21p 0.986
SKI7 Ski7p 0.986
SYF2 Syf2p 0.985
LSM8 Lsm8p 0.985
NAM7 Nam7p 0.985
KEM1 Kem1p 0.984
CCR4 Ccr4p 0.982
PRP3 Prp3p 0.981
MUD2 Mud2p 0.980
CBC2 Cbc2p 0.979
PRP43 Prp43p 0.978
SPT5 Spt5p 0.978
SME1 Sme1p 0.977
DEF1 Def1p 0.976
PAT1 Pat1p 0.974
POP1 Pop1p 0.973
PAP2 Pap2p 0.967
HPR1 Hpr1p 0.966
SNU66 Snu66p 0.962
RNA14 Rna14p 0.961
POP7 Pop7p 0.960
POP4 Pop4p 0.951
PFS2 Pfs2p 0.948
DED1 Ded1p 0.944
CDC39 Cdc39p 0.942
PCF11 Pcf11p 0.941
LSM7 Lsm7p 0.938
LUC7 Luc7p 0.936
BRR1 Brr1p 0.936
SPP381 Spp381p 0.934
MTR4 Mtr4p 0.931
RRP43 Rrp43p 0.929
PTA1 Pta1p 0.927
PAP1 Pap1p 0.926
CFT2 Cft2p 0.925
RRP45 Rrp45p 0.925
CAF40 Caf40p 0.923
PRP21 Prp21p 0.919
SPP382 Spp382p 0.916
CWC21 Cwc21p 0.913
RRP4 Rrp4p 0.911
POP5 Pop5p 0.911
MPE1 Mpe1p 0.910
YHC1 Yhc1p 0.909
IST3 Ist3p 0.895
DCP1 Dcp1p 0.888
SNP1 Snp1p 0.887
YJU2 Yju2p 0.886
IME4 Ime4p 0.883
NTC20 Ntc20p 0.879
NAB3 Nab3p 0.876
TIF4631 Tif4631p 0.872
SKI3 Ski3p 0.869
GBP2 Gbp2p 0.867
ECM2 Ecm2p 0.866
SNU23 Snu23p 0.847
FIP1 Fip1p 0.844
NOT5 Not5p 0.823
Loading network...
Caenorhabditis elegans
Name Description Probability Func Analog Organism
cacn-1 Protein CACN-1 0.550
prp-21 Protein PRP-21 0.444
Y66H1A.4 Protein Y66H1A.4 0.401
C16A3.1 Protein C16A3.1 0.369
snr-4 Protein SNR-4 0.357
snr-7 Protein SNR-7 0.348
rsp-8 Protein RSP-8 0.333
npp-9 Protein NPP-9 0.324
snr-1 Protein SNR-1 0.307
suf-1 Protein SUF-1 0.304
rpb-11 Protein RPB-11 0.299
snr-6 Protein SNR-6 0.279
F26B1.2 Protein F26B1.2 0.265
cul-1 Protein CUL-1 0.264
rsp-1 Protein RSP-1 0.259
C44E4.4 Protein C44E4.4 0.240
eya-1 Protein EYA-1 0.232
dpy-30 Protein DPY-30 0.220
snr-2 Protein SNR-2 0.207
cyn-15 Protein CYN-15 0.204
CELE_C17E4.6 Protein C17E4.6 0.201
cdc-26 Protein CDC-26 0.181
T28D9.1 Protein T28D9.1 0.175
F09D1.1 Protein F09D1.1 0.174
lsm-7 Protein LSM-7 0.172
uaf-2 Protein UAF-2 0.169
pabp-2 Protein PABP-2 0.166
aly-3 Protein ALY-3 0.166
hrpf-1 Protein HRPF-1 0.159
rsp-7 Protein RSP-7 0.151
hrp-1 Protein HRP-1 0.150
pus-1 Protein PUS-1 0.148
lsm-5 Protein LSM-5 0.147
eftu-2 Protein EFTU-2 0.146
sec-31 Protein SEC-31 0.140
ruvb-1 Protein RUVB-1 0.134
rpb-10 Protein RPB-10 0.133
CELE_W03F9.10 Protein W03F9.10 0.133
snr-5 Protein SNR-5 0.131
prp-8 Protein PRP-8 0.126
F58E10.3 Protein F58E10.3 0.123
CELE_F23A7.4 Protein F23A7.4 0.121
emb-5 Protein EMB-5 0.120
CELE_Y59A8B.10 Protein Y59A8B.10 0.120
C48B6.2 Protein C48B6.2 0.117
emb-4 Protein EMB-4 0.117
C32D5.11 Protein C32D5.11 0.117
smg-3 Protein SMG-3 0.116
CELE_C12D8.1 Protein C12D8.1 0.114
rnp-6 Protein RNP-6 0.113
B0464.2 Protein B0464.2 0.112
ran-2 Protein RAN-2 0.110
H06I04.3 Protein H06I04.3 0.105
CELE_Y75B8A.31 Protein Y75B8A.31 0.103
F55F8.9 Protein F55F8.9 0.101
attf-2 Protein ATTF-2 0.100
csr-1 Protein CSR-1 0.100
CELE_R02D3.3 Protein R02D3.3 0.100
CELE_Y106G6D.7 Protein Y106G6D.7 0.098
rnp-5 Protein RNP-5 0.098
smgl-1 Protein SMGL-1 0.097
rpb-6 Protein RPB-6 0.094
skp-1 Protein SKP-1 0.092
hcp-3 Protein HCP-3 0.092
fipp-1 Protein FIPP-1 0.092
thoc-3 Protein THOC-3 0.092
exc-7 Protein EXC-7 0.089
CELE_C16C10.4 Protein C16C10.4 0.088
nol-5 Protein NOL-5 0.087
npp-11 Protein NPP-11 0.087
mag-1 Protein MAG-1 0.086
kin-10 Protein KIN-10 0.086
smg-2 Protein SMG-2 0.082
lst-3 Protein LST-3 0.080
CELE_R06A4.2 Protein R06A4.2 0.079
cux-7 Protein CUX-7 0.078
ZK418.9 Protein ZK418.9 0.077
K05C4.5 Protein K05C4.5 0.077
teg-1 Protein TEG-1 0.077
pri-2 Protein PRI-2 0.076
let-49 Protein LET-49 0.076
zyg-1 Protein ZYG-1 0.076
moc-3 Protein MOC-3 0.075
ncbp-2 Protein NCBP-2 0.075
CELE_F19F10.9 Protein F19F10.9 0.075
let-502 Protein LET-502 0.074
tac-1 Protein TAC-1 0.074
smu-2 Protein SMU-2 0.073
B0035.1 Protein B0035.1 0.073
lmn-1 Protein LMN-1 0.073
set-16 Protein SET-16 0.072
eif-6 Protein EIF-6 0.072
K07C5.3 Protein K07C5.3 0.071
eef-1A.1 Protein EEF-1A.1 0.070
swd-2.2 Protein SWD-2.2 0.070
F08B4.7 Protein F08B4.7 0.070
cyn-12 Protein CYN-12 0.069
Y48E1A.1 Protein Y48E1A.1 0.068
C01F1.1 Protein C01F1.1 0.068
aos-1 Protein AOS-1 0.067
Loading network...
Danio rerio
Name Description Probability Func Analog Organism
snrnp70 small nuclear ribonucleoprotein 70 (U1) 0.667
hnrnph1l heterogeneous nuclear ribonucleoprotein H1, like 0.614
srsf2 serine/arginine-rich splicing factor 2 0.584
snrpd3l small nuclear ribonucleoprotein D3 polypeptide, like 0.489
rbmx RNA binding motif protein, X-linked 0.361
sf1 splicing factor 1 0.269
snrpa small nuclear ribonucleoprotein polypeptide A 0.241
smx5 smx5 0.228
hnrnpa0l heterogeneous nuclear ribonucleoprotein A0, like 0.225
smu1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) 0.217
khdrbs1a KH domain containing, RNA binding, signal transduction associated 1a 0.205
ewsr1b Ewing sarcoma breakpoint region 1b 0.201
sf3b1 splicing factor 3b, subunit 1 0.195
thoc5 THO complex 5 0.191
rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 0.187
u2af1 U2(RNU2) small nuclear RNA auxiliary factor 1 0.183
snrpd1 small nuclear ribonucleoprotein D1 polypeptide 0.175
ints6 integrator complex subunit 6 0.167
ddx39aa DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa 0.166
calm3b calmodulin 3b (phosphorylase kinase, delta) 0.161
puf60b poly-U binding splicing factor b 0.155
phf5a PHD finger protein 5A 0.153
api5 apoptosis inhibitor 5 0.153
magoh mago-nashi homolog, proliferation-associated (Drosophila) 0.147
ef1a elongation factor 1-alpha 0.147
srsf6b serine/arginine-rich splicing factor 6b 0.140
srsf6a serine/arginine-rich splicing factor 6a 0.139
srrt serrate RNA effector molecule homolog (Arabidopsis) 0.136
prpf8 pre-mRNA processing factor 8 0.130
safb scaffold attachment factor B 0.127
prpf39 PRP39 pre-mRNA processing factor 39 homolog (yeast) 0.126
cstf1 cleavage stimulation factor, 3' pre-RNA, subunit 1 0.126
dhx16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 0.120
zgc:112425 zgc:112425 0.118
rbm39a RNA binding motif protein 39a 0.118
ilf2 interleukin enhancer binding factor 2 0.117
tardbp TAR DNA binding protein 0.116
mbnl2 muscleblind-like 2 (Drosophila) 0.114
tra2a transformer-2 alpha 0.113
ybx1 Y box binding protein 1 0.107
h2afvl H2A histone family, member V, like 0.105
upf2 UPF2 regulator of nonsense transcripts homolog (yeast) 0.104
wu:fb63c04 wu:fb63c04 0.103
zgc:92194 zgc:92194 0.100
luc7l LUC7-like (S. cerevisiae) 0.097
plrg1 pleiotropic regulator 1 0.097
pcbp2 poly(rC) binding protein 2 0.097
upf1 upf1 regulator of nonsense transcripts homolog (yeast) 0.096
setb SET translocation (myeloid leukemia-associated) B 0.094
LOC570775 protein argonaute-1-like 0.092
si:ch211-59d15.5 si:ch211-59d15.5 0.092
med18 mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) 0.091
snrpd3 small nuclear ribonucleoprotein D3 polypeptide 0.090
zgc:86598 zgc:86598 0.090
spsb1 splA/ryanodine receptor domain and SOCS box containing 1 0.089
si:dkey-67c22.2 si:dkey-67c22.2 0.089
snrpb2 small nuclear ribonucleoprotein polypeptide B2 0.088
ppp4ca protein phosphatase 4 (formerly X), catalytic subunit a 0.086
zgc:77052 zgc:77052 0.082
ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 0.079
phax phosphorylated adaptor for RNA export 0.078
h3f3c H3 histone, family 3C 0.077
dhx37 DEAH (Asp-Glu-Ala-His) box polypeptide 37 0.077
sulf2l sulfatase 2, like 0.075
LOC100003514 protein kinase C alpha type-like 0.075
zgc:136380 zgc:136380 0.075
trnau1apl tRNA selenocysteine 1 associated protein 1, like 0.073
znf207a zinc finger protein 207, a 0.070
atf4b2 activating transcription factor 4b2 0.068
cd99l2 CD99 antigen-like 2 0.066
u2af2b U2 small nuclear RNA auxiliary factor 2b 0.066
pqbp1l polyglutamine binding protein 1-like 0.066
cpsf6 cleavage and polyadenylation specific factor 6 0.065
hnrnpk heterogeneous nuclear ribonucleoprotein K 0.065
ptbp2 polypyrimidine tract binding protein 2 0.065
epb41l5 erythrocyte membrane protein band 4.1 like 5 0.064
cpsf2 cleavage and polyadenylation specific factor 2 0.064
atrx alpha thalassemia/mental retardation syndrome X-linked homolog (human) 0.064
npm1 nucleophosmin 1 0.063
wu:fb58e05 wu:fb58e05 0.063
rbb4l retinoblastoma binding protein 4, like 0.062
tcea1 transcription elongation factor A (SII), 1 0.062
smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 0.061
srsf11 serine/arginine-rich splicing factor 11 0.058
rbm4.1 RNA binding motif protein 4.1 0.057
gabpa GA-binding protein transcription factor, alpha subunit 0.056
smad5 MAD homolog 5 (Drosophila) 0.055
g3bp1 GTPase activating protein (SH3 domain) binding protein 1 0.055
thoc1 THO complex 1 0.054
anp32a acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 0.054
srsf4 serine/arginine-rich splicing factor 4 0.051
ctr9 Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 0.051
zgc:136773 zgc:136773 0.050
acvr1l activin A receptor, type I like 0.050
appa amyloid beta (A4) precursor protein a 0.050
zgc:56409 zgc:56409 0.050
ddx19 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) 0.050
si:dkey-181m9.9 si:dkey-181m9.9 0.049
im:7153552 im:7153552 0.049
elavl1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) 0.049
Loading network...
Drosophila melanogaster
Name Description Probability Func Analog Organism
AGO1 Argonaute-1 0.962
U2af38 U2 small nuclear riboprotein auxiliary factor 38 0.950
14-3-3epsilon CG31196 gene product from transcript CG31196-RA 0.949
Spt6 CG12225 gene product from transcript CG12225-RA 0.949
scny scrawny 0.948
lark CG8597 gene product from transcript CG8597-RD 0.913
rin rasputin 0.885
E(z) Enhancer of zeste 0.857
B52 CG10851 gene product from transcript CG10851-RB 0.850
Su(var)3-3 Suppressor of variegation 3-3 0.833
Mfap1 Microfibril-associated protein 1 0.815
CG7971 CG7971 gene product from transcript CG7971-RC 0.804
SmF Small ribonucleoprotein particle protein SmF 0.784
Bap170 Brahma associated protein 170kD 0.769
CG2199 CG2199 gene product from transcript CG2199-RB 0.713
Pen Pendulin 0.712
Ard1 Arrest defective 1 0.692
U2A CG1406 gene product from transcript CG1406-RA 0.685
Lam Lamin 0.676
snf sans fille 0.646
bl bancal 0.623
Ntf-2 Nuclear transport factor-2 0.619
Rat1 CG10354 gene product from transcript CG10354-RA 0.614
caz cabeza 0.613
SC35 CG5442 gene product from transcript CG5442-RC 0.609
Hrb27C Heterogeneous nuclear ribonucleoprotein at 27C 0.603
CG4849 CG4849 gene product from transcript CG4849-RA 0.594
Rcd1 Reduction in Cnn dots 1 0.558
Bap55 Brahma associated protein 55kD 0.552
heph hephaestus 0.541
Hel25E Helicase at 25E 0.511
CG6197 CG6197 gene product from transcript CG6197-RA 0.489
rump rumpelstiltskin 0.478
Nup358 Nucleoporin 358 0.477
U2af50 U2 small nuclear riboprotein auxiliary factor 50 0.476
Smn survival motor neuron 0.469
tho2 CG31671 gene product from transcript CG31671-RA 0.467
Nup154 Nucleoporin 154 0.467
ecd ecdysoneless 0.466
cdc2 CG5363 gene product from transcript CG5363-RA 0.459
CG1240 CG1240 gene product from transcript CG1240-RA 0.442
CG5746 CG5746 gene product from transcript CG5746-RB 0.440
Hrb98DE Heterogeneous nuclear ribonucleoprotein at 98DE 0.440
RnpS1 RNA-binding protein S1 0.439
CG8108 CG8108 gene product from transcript CG8108-RA 0.430
CG6015 CG6015 gene product from transcript CG6015-RA 0.428
CG4785 CG4785 gene product from transcript CG4785-RA 0.423
CG10333 CG10333 gene product from transcript CG10333-RA 0.422
dmt dalmatian 0.416
CG4747 CG4747 gene product from transcript CG4747-RB 0.413
Zn72D CG5215 gene product from transcript CG5215-RB 0.411
tsu tsunagi 0.406
CG4699 CG4699 gene product from transcript CG4699-RJ 0.399
tral trailer hitch 0.393
CG11266 CG11266 gene product from transcript CG11266-RD 0.386
CG6610 CG6610 gene product from transcript CG6610-RA 0.386
CstF-50 CG2261 gene product from transcript CG2261-RA 0.377
CG5198 CG5198 gene product from transcript CG5198-RA 0.374
dco discs overgrown 0.373
pic piccolo 0.359
CG16903 CG16903 gene product from transcript CG16903-RA 0.358
LSm7 CG13277 gene product from transcript CG13277-RA 0.354
Srp54 CG4602 gene product from transcript CG4602-RA 0.353
ctp cut up 0.349
aub aubergine 0.348
alpha-Cat alpha Catenin 0.348
UbcD2 Ubiquitin conjugating enzyme 2 0.346
CG4038 CG4038 gene product from transcript CG4038-RA 0.343
TBPH CG10327 gene product from transcript CG10327-RC 0.338
CG13900 CG13900 gene product from transcript CG13900-RA 0.336
CG8149 CG8149 gene product from transcript CG8149-RA 0.334
HmgD High mobility group protein D 0.334
Bj1 Bj1 protein 0.330
CG1347 CG1347 gene product from transcript CG1347-RB 0.330
CG3358 CG3358 gene product from transcript CG3358-RA 0.325
His2Av Histone H2A variant 0.322
Ge-1 CG6181 gene product from transcript CG6181-RA 0.318
Slu7 CG1420 gene product from transcript CG1420-RA 0.317
Nup75 Nucleoporin 75 0.313
wdb widerborst 0.309
pelo pelota 0.304
tra transformer 0.298
Atx2 Ataxin-2 0.298
su(Hw) suppressor of Hairy wing 0.294
RpII215 RNA polymerase II 215kD subunit 0.294
RpII33 RNA polymerase II 33kD subunit 0.292
psq pipsqueak 0.291
Pabp2 CG2163 gene product from transcript CG2163-RA 0.289
Rpb5 CG11979 gene product from transcript CG11979-RA 0.283
hay haywire 0.283
CG4751 CG4751 gene product from transcript CG4751-RA 0.282
Sfmbt Scm-related gene containing four mbt domains 0.278
LSm3 CG31184 gene product from transcript CG31184-RA 0.272
MBD-R2 CG10042 gene product from transcript CG10042-RB 0.271
CG10418 CG10418 gene product from transcript CG10418-RA 0.267
Rack1 Receptor of activated protein kinase C 1 0.260
CG11107 CG11107 gene product from transcript CG11107-RA 0.256
Nup50 Nucleoporin 50 0.253
nuf nuclear fallout 0.253
dbe dribble 0.250
Loading network...
Homo sapiens
Name Description Probability Func Analog Organism
MAGOH mago-nashi homolog, proliferation-associated (Drosophila) 1.000
UPF1 UPF1 regulator of nonsense transcripts homolog (yeast) 1.000
EIF4A3 eukaryotic translation initiation factor 4A3 1.000
PABPC1 poly(A) binding protein, cytoplasmic 1 1.000
SRRM1 serine/arginine repetitive matrix 1 1.000
RNPS1 RNA binding protein S1, serine-rich domain 1.000
SF3A2 splicing factor 3a, subunit 2, 66kDa 1.000
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa 1.000
U2AF2 U2 small nuclear RNA auxiliary factor 2 1.000
SRPK2 SRSF protein kinase 2 1.000
SRSF3 serine/arginine-rich splicing factor 3 1.000
RBM10 RNA binding motif protein 10 1.000
LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) 1.000
SNRPB small nuclear ribonucleoprotein polypeptides B and B1 1.000
U2AF1 U2 small nuclear RNA auxiliary factor 1 1.000
QKI quaking homolog, KH domain RNA binding (mouse) 1.000
SRPK1 SRSF protein kinase 1 1.000
RBM8A RNA binding motif protein 8A 0.999
PCBP1 poly(rC) binding protein 1 0.999
SMG1 SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) 0.999
SNRPF small nuclear ribonucleoprotein polypeptide F 0.999
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 0.999
SRSF2 serine/arginine-rich splicing factor 2 0.999
PTBP1 polypyrimidine tract binding protein 1 0.999
ILF3 interleukin enhancer binding factor 3, 90kDa 0.998
DHX15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 0.997
RBM39 RNA binding motif protein 39 0.997
THOC4 THO complex 4 0.997
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.996
LSM2 LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.996
PRPF38A PRP38 pre-mRNA processing factor 38 (yeast) domain containing A 0.996
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa 0.994
LSM7 LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.994
PRPF8 PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae) 0.993
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.993
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.991
UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast) 0.990
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.989
TNRC6A trinucleotide repeat containing 6A 0.986
SNRPA small nuclear ribonucleoprotein polypeptide A 0.985
EIF2C2 eukaryotic translation initiation factor 2C, 2 0.983
HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H') 0.980
TRA2B transformer 2 beta homolog (Drosophila) 0.980
SNRPE small nuclear ribonucleoprotein polypeptide E 0.980
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 0.979
TP53 tumor protein p53 0.975
PRPF4 PRP4 pre-mRNA processing factor 4 homolog (yeast) 0.975
GPKOW G patch domain and KOW motifs 0.975
EFTUD2 elongation factor Tu GTP binding domain containing 2 0.972
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 0.971
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.969
SF1 splicing factor 1 0.968
PRPF19 PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) 0.965
NAA38 N(alpha)-acetyltransferase 38, NatC auxiliary subunit 0.963
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.963
SRSF7 serine/arginine-rich splicing factor 7 0.960
EIF2C1 eukaryotic translation initiation factor 2C, 1 0.958
SRSF1 serine/arginine-rich splicing factor 1 0.957
PCBP2 poly(rC) binding protein 2 0.956
PAN3 PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) 0.955
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast) 0.954
SAFB scaffold attachment factor B 0.950
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.947
DDX5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 0.947
YTHDC1 YTH domain containing 1 0.945
RBMX RNA binding motif protein, X-linked 0.940
EXOSC3 exosome component 3 0.940
ATXN1 ataxin 1 0.939
SFPQ splicing factor proline/glutamine-rich 0.925
MATR3 matrin 3 0.925
EXOSC2 exosome component 2 0.921
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.920
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 0.916
EIF3A eukaryotic translation initiation factor 3, subunit A 0.913
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.909
PRMT5 protein arginine methyltransferase 5 0.904
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa 0.902
CTNNBL1 catenin, beta like 1 0.897
WWOX WW domain containing oxidoreductase 0.892
ARGLU1 arginine and glutamate rich 1 0.891
ELAVL1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) 0.890
EXOSC7 exosome component 7 0.883
USP7 ubiquitin specific peptidase 7 (herpes virus-associated) 0.881
SUGP1 SURP and G patch domain containing 1 0.868
RTF1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 0.868
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.862
CDC5L CDC5 cell division cycle 5-like (S. pombe) 0.861
PNN pinin, desmosome associated protein 0.847
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 0.843
SRSF9 serine/arginine-rich splicing factor 9 0.836
DCP1A DCP1 decapping enzyme homolog A (S. cerevisiae) 0.835
CLNS1A chloride channel, nucleotide-sensitive, 1A 0.828
TOB1 transducer of ERBB2, 1 0.827
SF3B4 splicing factor 3b, subunit 4, 49kDa 0.817
PRPF3 PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae) 0.804
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.789
PUF60 poly-U binding splicing factor 60KDa 0.785
CNOT7 CCR4-NOT transcription complex, subunit 7 0.776
CAND1 cullin-associated and neddylation-dissociated 1 0.774
YBX1 Y box binding protein 1 0.772
Loading network...
Mus musculus
Name Description Probability Func Analog Organism
Srsf1 serine/arginine-rich splicing factor 1 0.987
Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) 0.944
Hnrpdl heterogeneous nuclear ribonucleoprotein D-like 0.937
Rbmxrt RNA binding motif protein, X chromosome retrogene 0.901
Srsf3 serine/arginine-rich splicing factor 3 0.884
Hnrnpab heterogeneous nuclear ribonucleoprotein A/B 0.883
Phf5a PHD finger protein 5A 0.857
Srsf2 serine/arginine-rich splicing factor 2 0.831
Luc7l2 LUC7-like 2 (S. cerevisiae) 0.829
Tardbp TAR DNA binding protein 0.801
Eif2c2 eukaryotic translation initiation factor 2C, 2 0.795
Pcna proliferating cell nuclear antigen 0.767
Magoh mago-nashi homolog, proliferation-associated (Drosophila) 0.763
Hnrnpk heterogeneous nuclear ribonucleoprotein K 0.758
Srsf6 serine/arginine-rich splicing factor 6 0.751
Prmt1 protein arginine N-methyltransferase 1 0.740
Fus fusion, derived from t(12;16) malignant liposarcoma (human) 0.738
Cdk4 cyclin-dependent kinase 4 0.731
Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 0.729
Ddx5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 0.713
Pabpn1 poly(A) binding protein, nuclear 1 0.704
Ddx39b DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.703
Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 0.701
Rbm14 RNA binding motif protein 14 0.691
Kpna2 karyopherin (importin) alpha 2 0.673
Srrt serrate RNA effector molecule homolog (Arabidopsis) 0.672
2500003M10Rik RIKEN cDNA 2500003M10 gene 0.670
Khdrbs1 KH domain containing, RNA binding, signal transduction associated 1 0.643
Ddx6 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 0.639
Safb scaffold attachment factor B 0.635
Wdr77 WD repeat domain 77 0.609
Hnrnpd heterogeneous nuclear ribonucleoprotein D 0.606
Elavl1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) 0.602
Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 0.593
Emg1 EMG1 nucleolar protein homolog (S. cerevisiae) 0.589
Hnrnpf heterogeneous nuclear ribonucleoprotein F 0.588
Srsf7 serine/arginine-rich splicing factor 7 0.568
Srrm1 serine/arginine repetitive matrix 1 0.568
Ppp1cc protein phosphatase 1, catalytic subunit, gamma isoform 0.564
Erh enhancer of rudimentary homolog (Drosophila) 0.563
Fubp1 far upstream element (FUSE) binding protein 1 0.562
Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 0.536
Ptma prothymosin alpha 0.532
Rbm10 RNA binding motif protein 10 0.508
Actl6a actin-like 6A 0.507
Dhx9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 0.504
Snrpg small nuclear ribonucleoprotein polypeptide G 0.498
Zc3h11a zinc finger CCCH type containing 11A 0.487
2310036O22Rik RIKEN cDNA 2310036O22 gene 0.487
Dhx15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 0.477
Xab2 XPA binding protein 2 0.472
Ilf2 interleukin enhancer binding factor 2 0.460
Safb2 scaffold attachment factor B2 0.449
Cks2 CDC28 protein kinase regulatory subunit 2 0.448
Thoc4 THO complex 4 0.439
Mybbp1a MYB binding protein (P160) 1a 0.426
Snrpd1 small nuclear ribonucleoprotein D1 0.424
Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein 0.403
Nono non-POU-domain-containing, octamer binding protein 0.402
Ccnb1 cyclin B1 0.402
Srek1 splicing regulatory glutamine/lysine-rich protein 1 0.398
Anp32e acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.397
Puf60 poly-U binding splicing factor 60 0.390
Acin1 apoptotic chromatin condensation inducer 1 0.388
Nhp2l1 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) 0.387
Cnot1 CCR4-NOT transcription complex, subunit 1 0.385
Hnrpll heterogeneous nuclear ribonucleoprotein L-like 0.384
Rc3h1 RING CCCH (C3H) domains 1 0.382
Brd2 bromodomain containing 2 0.380
Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 0.380
Dtymk deoxythymidylate kinase 0.369
Brd4 bromodomain containing 4 0.361
Ldb3 LIM domain binding 3 0.356
Polr2d polymerase (RNA) II (DNA directed) polypeptide D 0.343
Rbm8a RNA binding motif protein 8a 0.342
Hnrnph2 heterogeneous nuclear ribonucleoprotein H2 0.336
Snrpe small nuclear ribonucleoprotein E 0.334
Stip1 stress-induced phosphoprotein 1 0.318
Exosc10 exosome component 10 0.318
Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 0.309
Rbm39 RNA binding motif protein 39 0.302
Prpf38b PRP38 pre-mRNA processing factor 38 (yeast) domain containing B 0.298
Usp7 ubiquitin specific peptidase 7 0.294
Nxf1 nuclear RNA export factor 1 homolog (S. cerevisiae) 0.290
Tra2b transformer 2 beta homolog (Drosophila) 0.284
Rnps1 ribonucleic acid binding protein S1 0.274
Sarnp SAP domain containing ribonucleoprotein 0.269
Ppp2r2a protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform 0.262
Bptf bromodomain PHD finger transcription factor 0.260
Ylpm1 YLP motif containing 1 0.259
Usp10 ubiquitin specific peptidase 10 0.257
Cdk1 cyclin-dependent kinase 1 0.257
Neurl1a neuralized homolog 1A (Drosophila) 0.255
Hcfc1 host cell factor C1 0.253
Hnrnpm heterogeneous nuclear ribonucleoprotein M 0.252
Fbl fibrillarin 0.250
Pnn pinin 0.250
Tfdp1 transcription factor Dp 1 0.249
Nudt21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 0.249
Mrpl3 mitochondrial ribosomal protein L3 0.241
Loading network...
Rattus norvegicus
Name Description Probability Func Analog Organism
Rnps1 ribonucleic acid binding protein S1 0.704
Hnrph1 heterogeneous nuclear ribonucleoprotein H1 0.537
Hmgb2 high mobility group box 2 0.305
Sfrs2 splicing factor, arginine/serine-rich 2 0.290
Rbmxrtl RNA binding motif protein, X chromosome retrogene-like 0.260
Tra2b transformer 2 beta homolog (Drosophila) 0.243
Ccnl1 cyclin L1 0.225
Cand1 cullin-associated and neddylation-dissociated 1 0.195
Nup88 nucleoporin 88 0.188
Sfrs1 splicing factor, arginine/serine-rich 1 0.188
Sf3a3 splicing factor 3a, subunit 3 0.175
LOC686980 similar to arsenate resistance protein 2 0.151
Bat1 HLA-B associated transcript 1 0.132
Prpf39 PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae) 0.125
RGD1565775 similar to RIKEN cDNA 2810403A07 0.115
Trim28 tripartite motif-containing 28 0.098
Plrg1 pleiotropic regulator 1, PRL1 homolog (Arabidopsis) 0.095
Hist1h1a histone cluster 1, H1a 0.093
Khdrbs1 KH domain containing, RNA binding, signal transduction associated 1 0.088
Papola poly (A) polymerase alpha 0.086
Akap8 A kinase (PRKA) anchor protein 8 0.085
Clk1 CDC-like kinase 1 0.080
H3f3b H3 histone, family 3B 0.079
Rsrc2 arginine/serine-rich coiled-coil 2 0.073
Fos FBJ osteosarcoma oncogene 0.071
Ppp1r15a protein phosphatase 1, regulatory (inhibitor) subunit 15A 0.069
Bud13 BUD13 homolog (S. cerevisiae) 0.068
Snrpb small nuclear ribonucleoprotein polypeptides B and B1 0.067
Ruvbl1 RuvB-like 1 (E. coli) 0.062
Paf1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 0.062
Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 0.062
Hnrpdl heterogeneous nuclear ribonucleoprotein D-like 0.060
Wdfy1 WD repeat and FYVE domain containing 1 0.058
Hdac1 histone deacetylase 1 0.058
Tcea1 transcription elongation factor A (SII) 1 0.057
Gtf2e2 general transcription factor IIE, polypeptide 2, beta 0.056
Ywhaq tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 0.056
Mrps31 mitochondrial ribosomal protein S31 0.053
Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 0.052
Tardbp TAR DNA binding protein 0.051
Ssrp1 structure specific recognition protein 1 0.051
Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) 0.050
Nsf N-ethylmaleimide-sensitive factor 0.049
Hnrnph3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.047
Ddx17 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 0.046
Eif4h eukaryotic translation initiation factor 4H 0.045
Clns1a chloride channel, nucleotide-sensitive, 1A 0.042
Sfrs3 splicing factor, arginine/serine-rich 3 0.041
Sfrs5 splicing factor, arginine/serine-rich 5 0.041
Cnbp CCHC-type zinc finger, nucleic acid binding protein 0.040
Ttc3 tetratricopeptide repeat domain 3 0.040
Wbp11 WW domain binding protein 11 0.038
Creld2 cysteine-rich with EGF-like domains 2 0.038
Eif4a3 eukaryotic translation initiation factor 4A, isoform 3 0.037
Tial1 Tia1 cytotoxic granule-associated RNA binding protein-like 1 0.035
Arf6 ADP-ribosylation factor 6 0.035
Cdc20 cell division cycle 20 homolog (S. cerevisiae) 0.034
Tra2a transformer 2 alpha homolog (Drosophila) 0.034
Arglu1 arginine and glutamate rich 1 0.033
Luc7l LUC7-like (S. cerevisiae) 0.032
Aqr aquarius homolog (mouse) 0.032
Cobra1 cofactor of BRCA1 0.032
Dhx15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 0.032
Rbm8a RNA binding motif protein 8A 0.032
Bcas2 breast carcinoma amplified sequence 2 0.031
Racgap1 Rac GTPase-activating protein 1 0.031
Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 0.031
Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 0.031
Prmt1 protein arginine methyltransferase 1 0.030
Sart3 squamous cell carcinoma antigen recognized by T-cells 3 0.030
Tmpo thymopoietin 0.030
Anp32e acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.030
LOC687711 similar to small nuclear ribonucleoprotein D3 0.029
Rbm39 RNA binding motif protein 39 0.028
Ccnb1 cyclin B1 0.028
Polr2b polymerase (RNA) II (DNA directed) polypeptide B 0.027
Eef2 eukaryotic translation elongation factor 2 0.027
Top2a topoisomerase (DNA) II alpha 0.026
Ube2c ubiquitin-conjugating enzyme E2C 0.025
Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 0.025
Nxt1 NTF2-like export factor 1 0.025
Rabggtb Rab geranylgeranyltransferase, beta subunit 0.025
Rab1b RAB1B, member RAS oncogene family 0.024
Srrm2 serine/arginine repetitive matrix 2 0.024
Dkc1 dyskeratosis congenita 1, dyskerin 0.024
Rev1 REV1 homolog (S. cerevisiae) 0.023
Zranb2 zinc finger, RAN-binding domain containing 2 0.023
Usf2 upstream transcription factor 2, c-fos interacting 0.022
Ewsr1 Ewing sarcoma breakpoint region 1 0.022
Sart1 squamous cell carcinoma antigen recognized by T cells 0.022
Hmmr hyaluronan mediated motility receptor (RHAMM) 0.022
Ptma prothymosin alpha 0.021
Hnrpm heterogeneous nuclear ribonucleoprotein M 0.021
Ylpm1 YLP motif containing 1 0.021
Znf830 zinc finger protein 830 0.021
Pcna proliferating cell nuclear antigen 0.021
Ssb Sjogren syndrome antigen B 0.021
Cdkn3 cyclin-dependent kinase inhibitor 3 0.020
Cpd carboxypeptidase D 0.020
Pttg1 pituitary tumor-transforming 1 0.020