Process View
The network for 'serine family amino acid metabolic process' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.
The chemical reactions and pathways involving amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
SHM2 | Shm2p | 0.830 | |
GCV3 | Gcv3p | 0.590 | |
SER33 | Ser33p | 0.338 | |
TRP5 | Trp5p | 0.263 | |
SER3 | Ser3p | 0.261 | |
GND1 | Gnd1p | 0.203 | |
LAT1 | Lat1p | 0.199 | |
ARO2 | Aro2p | 0.178 | |
SUL1 | Sul1p | 0.150 | |
GCV1 | Gcv1p | 0.120 | |
MET3 | Met3p | 0.118 | |
MTD1 | Mtd1p | 0.107 | |
ALG13 | Alg13p | 0.100 | |
GCV2 | Gcv2p | 0.098 | |
THR1 | Thr1p | 0.093 | |
DPS1 | Dps1p | 0.089 | |
ADE12 | Ade12p | 0.088 | |
FMP40 | Fmp40p | 0.088 | |
PHO11 | Pho11p | 0.085 | |
GUS1 | Gus1p | 0.079 | |
PCL10 | Pcl10p | 0.079 | |
MET2 | Met2p | 0.077 | |
ERG13 | Erg13p | 0.076 | |
BDH1 | Bdh1p | 0.071 | |
ILV6 | Ilv6p | 0.069 | |
FPR1 | Fpr1p | 0.068 | |
NPL3 | Npl3p | 0.068 | |
NMA2 | Nma2p | 0.066 | |
ADE17 | Ade17p | 0.066 | |
ASR1 | Asr1p | 0.066 | |
MET22 | Met22p | 0.065 | |
HOM3 | Hom3p | 0.064 | |
RBK1 | Rbk1p | 0.063 | |
CYS3 | Cys3p | 0.062 | |
ASN1 | Asn1p | 0.057 | |
SUL2 | Sul2p | 0.054 | |
THR4 | Thr4p | 0.054 | |
GCY1 | Gcy1p | 0.053 | |
YGR054W | hypothetical protein | 0.053 | |
MCH4 | Mch4p | 0.051 | |
PHO12 | Pho12p | 0.051 | |
DLD3 | Dld3p | 0.049 | |
LSC2 | Lsc2p | 0.049 | |
PRM7 | Prm7p | 0.048 | |
ADE3 | Ade3p | 0.048 | |
GNP1 | Gnp1p | 0.048 | |
ARO10 | Aro10p | 0.047 | |
SER1 | Ser1p | 0.045 | |
LEU2 | Leu2p | 0.044 | |
BIT61 | Bit61p | 0.042 | |
SAM3 | Sam3p | 0.042 | |
TPN1 | Tpn1p | 0.041 | |
ALT1 | Alt1p | 0.041 | |
MET6 | Met6p | 0.041 | |
YER163C | hypothetical protein | 0.040 | |
SRD1 | Srd1p | 0.040 | |
ADO1 | Ado1p | 0.039 | |
GDH1 | Gdh1p | 0.038 | |
ADE1 | Ade1p | 0.038 | |
STF1 | Stf1p | 0.038 | |
FAS2 | Fas2p | 0.036 | |
YLR264C-A | hypothetical protein | 0.036 | |
ARP10 | Arp10p | 0.035 | |
ODC1 | Odc1p | 0.035 | |
YGR205W | hypothetical protein | 0.035 | |
ADP1 | Adp1p | 0.035 | |
YLR281C | hypothetical protein | 0.035 | |
YCT1 | Yct1p | 0.034 | |
YOL038C-A | hypothetical protein | 0.034 | |
YAT2 | Yat2p | 0.034 | |
BSC1 | Bsc1p | 0.033 | |
RPE1 | Rpe1p | 0.033 | |
ARO9 | Aro9p | 0.033 | |
MER1 | Mer1p | 0.032 | |
ICL2 | Icl2p | 0.032 | |
MET16 | Met16p | 0.031 | |
MMF1 | Mmf1p | 0.031 | |
YLR042C | hypothetical protein | 0.030 | |
ADH6 | Adh6p | 0.030 | |
ALP1 | Alp1p | 0.030 | |
YLR162W | hypothetical protein | 0.030 | |
ARR2 | Arr2p | 0.030 | |
YPR157W | hypothetical protein | 0.029 | |
YJR085C | hypothetical protein | 0.029 | |
DUG1 | Dug1p | 0.029 | |
YOR302W | hypothetical protein | 0.028 | |
CUP1-1 | Cup1-1p | 0.028 | |
CYB2 | Cyb2p | 0.028 | |
MET14 | Met14p | 0.028 | |
HPF1 | Hpf1p | 0.028 | |
YGR016W | hypothetical protein | 0.027 | |
YAR068W | hypothetical protein | 0.027 | |
ZPS1 | Zps1p | 0.027 | |
PCL9 | Pcl9p | 0.027 | |
ATP6 | Atp6p | 0.027 | |
MET8 | Met8p | 0.027 | |
YIR035C | hypothetical protein | 0.027 | |
SRX1 | Srx1p | 0.026 | |
SMF1 | Smf1p | 0.026 | |
YIR042C | hypothetical protein | 0.026 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
EIF4EBP1 | eukaryotic translation initiation factor 4E binding protein 1 | 0.801 | |
AARS | alanyl-tRNA synthetase | 0.691 | |
GARS | glycyl-tRNA synthetase | 0.659 | |
MARS | methionyl-tRNA synthetase | 0.616 | |
PSAT1 | phosphoserine aminotransferase 1 | 0.538 | |
YARS | tyrosyl-tRNA synthetase | 0.431 | |
PCK2 | phosphoenolpyruvate carboxykinase 2 (mitochondrial) | 0.309 | |
ASNS | asparagine synthetase (glutamine-hydrolyzing) | 0.296 | |
TRIB3 | tribbles homolog 3 (Drosophila) | 0.123 | |
CARS | cysteinyl-tRNA synthetase | 0.121 | |
SHMT2 | serine hydroxymethyltransferase 2 (mitochondrial) | 0.121 | |
ALDOB | aldolase B, fructose-bisphosphate | 0.087 | |
PHGDH | phosphoglycerate dehydrogenase | 0.083 | |
TUBGCP4 | tubulin, gamma complex associated protein 4 | 0.068 | |
IARS | isoleucyl-tRNA synthetase | 0.054 | |
LONP1 | lon peptidase 1, mitochondrial | 0.045 | |
ATF4 | activating transcription factor 4 (tax-responsive enhancer element B67) | 0.041 | |
MTHFD2 | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase | 0.039 | |
XPOT | exportin, tRNA (nuclear export receptor for tRNAs) | 0.036 | |
GPT2 | glutamic pyruvate transaminase (alanine aminotransferase) 2 | 0.020 | |
SARS | seryl-tRNA synthetase | 0.018 | |
CEBPG | CCAAT/enhancer binding protein (C/EBP), gamma | 0.014 | |
ZNF277 | zinc finger protein 277 | 0.014 | |
SLC7A5 | solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 | 0.012 | |
TIMM44 | translocase of inner mitochondrial membrane 44 homolog (yeast) | 0.012 | |
TARS | threonyl-tRNA synthetase | 0.012 | |
CHAC1 | ChaC, cation transport regulator homolog 1 (E. coli) | 0.011 | |
SLC3A2 | solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 | 0.011 | |
SLC1A5 | solute carrier family 1 (neutral amino acid transporter), member 5 | 0.011 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
Gclc | glutamate-cysteine ligase, catalytic subunit | 0.995 | |
Gclm | glutamate-cysteine ligase, modifier subunit | 0.991 | |
Atad3a | ATPase family, AAA domain containing 3A | 0.264 | |
BC048355 | cDNA sequence BC048355 | 0.124 | |
Gsr | glutathione reductase | 0.098 | |
Gnrh1 | gonadotropin releasing hormone 1 | 0.089 | |
Shmt1 | serine hydroxymethyltransferase 1 (soluble) | 0.082 | |
Dazap1 | DAZ associated protein 1 | 0.060 | |
Fpgs | folylpolyglutamyl synthetase | 0.059 | |
Slc6a13 | solute carrier family 6 (neurotransmitter transporter, GABA), member 13 | 0.053 | |
Umps | uridine monophosphate synthetase | 0.046 | |
Slc19a1 | solute carrier family 19 (sodium/hydrogen exchanger), member 1 | 0.039 | |
Acy1 | aminoacylase 1 | 0.037 | |
Slc6a12 | solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 | 0.031 | |
Dok1 | docking protein 1 | 0.029 | |
Srxn1 | sulfiredoxin 1 homolog (S. cerevisiae) | 0.028 | |
Lactb2 | lactamase, beta 2 | 0.026 | |
Ifrd2 | interferon-related developmental regulator 2 | 0.025 | |
C1qbp | complement component 1, q subcomponent binding protein | 0.025 | |
Shmt2 | serine hydroxymethyltransferase 2 (mitochondrial) | 0.024 | |
Phlda2 | pleckstrin homology-like domain, family A, member 2 | 0.022 | |
F13b | coagulation factor XIII, beta subunit | 0.020 | |
Smyd5 | SET and MYND domain containing 5 | 0.019 | |
Tbrg4 | transforming growth factor beta regulated gene 4 | 0.019 | |
Pbld2 | phenazine biosynthesis-like protein domain containing 2 | 0.018 | |
Aldob | aldolase B, fructose-bisphosphate | 0.018 | |
Usp10 | ubiquitin specific peptidase 10 | 0.018 | |
Hspa9 | heat shock protein 9 | 0.017 | |
Rrp1b | ribosomal RNA processing 1 homolog B (S. cerevisiae) | 0.017 | |
Mif | macrophage migration inhibitory factor | 0.017 | |
Gdf15 | growth differentiation factor 15 | 0.016 | |
Rrp9 | RRP9, small subunit (SSU) processome component, homolog (yeast) | 0.016 | |
Sfxn1 | sideroflexin 1 | 0.016 | |
Agxt | alanine-glyoxylate aminotransferase | 0.016 | |
Tmem183a | transmembrane protein 183A | 0.016 | |
Clcnka | chloride channel Ka | 0.016 | |
Hpd | 4-hydroxyphenylpyruvic acid dioxygenase | 0.016 | |
Eif4a1 | eukaryotic translation initiation factor 4A1 | 0.015 | |
Sars2 | seryl-aminoacyl-tRNA synthetase 2 | 0.015 | |
Tspan12 | tetraspanin 12 | 0.015 | |
Sardh | sarcosine dehydrogenase | 0.015 | |
Aldh18a1 | aldehyde dehydrogenase 18 family, member A1 | 0.015 | |
Eif4g1 | eukaryotic translation initiation factor 4, gamma 1 | 0.014 | |
Prodh2 | proline dehydrogenase (oxidase) 2 | 0.014 | |
Tpmt | thiopurine methyltransferase | 0.014 | |
Lap3 | leucine aminopeptidase 3 | 0.014 | |
Prodh | proline dehydrogenase | 0.014 | |
Hgd | homogentisate 1, 2-dioxygenase | 0.014 | |
Vegfa | vascular endothelial growth factor A | 0.013 | |
Mosc1 | MOCO sulphurase C-terminal domain containing 1 | 0.013 | |
Mthfd1 | methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase | 0.013 | |
Plin5 | perilipin 5 | 0.013 | |
Aspg | asparaginase homolog (S. cerevisiae) | 0.013 | |
Pzp | pregnancy zone protein | 0.013 | |
Gyk | glycerol kinase | 0.013 | |
Ftcd | formiminotransferase cyclodeaminase | 0.013 | |
Slc25a13 | solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 | 0.012 | |
Mpzl2 | myelin protein zero-like 2 | 0.012 | |
Agmat | agmatine ureohydrolase (agmatinase) | 0.012 | |
Mybl2 | myeloblastosis oncogene-like 2 | 0.012 | |
Hpn | hepsin | 0.012 | |
Agt | angiotensinogen (serpin peptidase inhibitor, clade A, member 8) | 0.012 | |
Gjb1 | gap junction protein, beta 1 | 0.012 | |
Slc26a1 | solute carrier family 26 (sulfate transporter), member 1 | 0.012 | |
Cwf19l1 | CWF19-like 1, cell cycle control (S. pombe) | 0.011 | |
Ggnbp1 | gametogenetin binding protein 1 | 0.011 | |
Stc2 | stanniocalcin 2 | 0.011 | |
Zfp335 | zinc finger protein 335 | 0.011 | |
Psmg3 | proteasome (prosome, macropain) assembly chaperone 3 | 0.011 | |
Gnmt | glycine N-methyltransferase | 0.011 | |
Sod2 | superoxide dismutase 2, mitochondrial | 0.011 | |
Nadk | NAD kinase | 0.010 | |
Pkp3 | plakophilin 3 | 0.010 | |
Dmgdh | dimethylglycine dehydrogenase precursor | 0.010 | |
Slc22a6 | solute carrier family 22 (organic anion transporter), member 6 | 0.010 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
Mat1a | methionine adenosyltransferase I, alpha | 0.168 | |
Dpys | dihydropyrimidinase | 0.114 | |
Upb1 | ureidopropionase, beta | 0.065 | |
Car5a | carbonic anhydrase 5a, mitochondrial | 0.062 | |
Asgr1 | asialoglycoprotein receptor 1 | 0.041 | |
Pah | phenylalanine hydroxylase | 0.040 | |
Ass1 | argininosuccinate synthetase 1 | 0.039 | |
Mro | maestro | 0.039 | |
Olr59 | olfactory receptor 59 | 0.038 | |
Gtpbp4 | GTP binding protein 4 | 0.031 | |
Ube2z | ubiquitin-conjugating enzyme E2Z | 0.030 | |
Fabp1 | fatty acid binding protein 1, liver | 0.029 | |
Nolc1 | nucleolar and coiled-body phosphoprotein 1 | 0.029 | |
Gys2 | glycogen synthase 2 | 0.028 | |
Ung | uracil-DNA glycosylase | 0.028 | |
Afm | afamin | 0.027 | |
Sds | serine dehydratase | 0.026 | |
Ahcy | adenosylhomocysteinase | 0.025 | |
Agt | angiotensinogen (serpin peptidase inhibitor, clade A, member 8) | 0.024 | |
Rcan1 | regulator of calcineurin 1 | 0.024 | |
Tbl3 | transducin (beta)-like 3 | 0.023 | |
Azgp1 | alpha-2-glycoprotein 1, zinc-binding | 0.023 | |
Fbp1 | fructose-1,6-bisphosphatase 1 | 0.022 | |
Prodh2 | proline dehydrogenase (oxidase) 2 | 0.022 | |
Faah | fatty acid amide hydrolase | 0.022 | |
Apoc4 | apolipoprotein C-IV | 0.021 | |
Sardh | sarcosine dehydrogenase | 0.021 | |
Tfec | transcription factor EC | 0.021 | |
Abcc6 | ATP-binding cassette, subfamily C (CFTR/MRP), member 6 | 0.021 | |
Lipc | lipase, hepatic | 0.020 | |
Gulo | gulonolactone (L-) oxidase | 0.020 | |
RGD1305347 | similar to RIKEN cDNA 2610528J11 | 0.020 | |
Cyp2c23 | cytochrome P450, family 2, subfamily c, polypeptide 23 | 0.020 | |
Dhtkd1 | dehydrogenase E1 and transketolase domain containing 1 | 0.019 | |
Cyp1a2 | cytochrome P450, family 1, subfamily a, polypeptide 2 | 0.019 | |
Dmgdh | dimethylglycine dehydrogenase | 0.019 | |
Hmbs | hydroxymethylbilane synthase | 0.018 | |
Xpnpep2 | X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound | 0.018 | |
Aadac | arylacetamide deacetylase (esterase) | 0.018 | |
Keg1 | kidney expressed gene 1 | 0.018 | |
Nr1h4 | nuclear receptor subfamily 1, group H, member 4 | 0.018 | |
Kynu | kynureninase (L-kynurenine hydrolase) | 0.017 | |
Ubqln1 | ubiquilin 1 | 0.017 | |
Prss2 | protease, serine, 2 | 0.017 | |
Adh7 | alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide | 0.016 | |
Apom | apolipoprotein M | 0.016 | |
Grhpr | glyoxylate reductase/hydroxypyruvate reductase | 0.016 | |
Apob | apolipoprotein B | 0.016 | |
Slc31a1 | solute carrier family 31 (copper transporters), member 1 | 0.016 | |
Hpd | 4-hydroxyphenylpyruvate dioxygenase | 0.016 | |
Hnf1a | HNF1 homeobox A | 0.015 | |
Bola3 | bolA homolog 3 (E. coli) | 0.015 | |
Bhmt | betaine-homocysteine methyltransferase | 0.015 | |
Hpn | hepsin | 0.015 | |
Aadat | aminoadipate aminotransferase | 0.015 | |
Adhfe1 | alcohol dehydrogenase, iron containing, 1 | 0.015 | |
Mdm2 | Mdm2 p53 binding protein homolog (mouse) | 0.015 | |
Proc | protein C | 0.014 | |
Cyp4f1 | cytochrome P450, family 4, subfamily f, polypeptide 1 | 0.014 | |
Baat | bile acid Coenzyme A: amino acid N-acyltransferase (glycine N-choloyltransferase) | 0.014 | |
Tp53 | tumor protein p53 | 0.014 | |
Afp | alpha-fetoprotein | 0.014 | |
Abcc2 | ATP-binding cassette, subfamily C (CFTR/MRP), member 2 | 0.014 | |
Atad3a | ATPase family, AAA domain containing 3A | 0.014 | |
Cela1 | chymotrypsin-like elastase family, member 1 | 0.014 | |
Snrpa | small nuclear ribonucleoprotein polypeptide A | 0.014 | |
Cyp3a18 | cytochrome P450, family 3, subfamily a, polypeptide 18 | 0.013 | |
Gjb1 | gap junction protein, beta 1 | 0.013 | |
RGD620382 | Nucleoside 2-deoxyribosyltransferase domain containing protein RGD620382 | 0.013 | |
Casp6 | caspase 6 | 0.013 | |
Cyp2d4 | cytochrome P450, family 2, subfamily d, polypeptide 4 | 0.013 | |
Bckdhb | branched chain keto acid dehydrogenase E1, beta polypeptide | 0.012 | |
Sult1c2 | sulfotransferase family, cytosolic, 1C, member 2 | 0.012 | |
Pdcd6ip | programmed cell death 6 interacting protein | 0.012 | |
Vcp | valosin-containing protein | 0.012 | |
Slc6a13 | solute carrier family 6 (neurotransmitter transporter, GABA), member 13 | 0.012 | |
Ces1c | carboxylesterase 1C | 0.012 | |
Thop1 | thimet oligopeptidase 1 | 0.012 | |
Hmox1 | heme oxygenase (decycling) 1 | 0.012 | |
Pus1 | pseudouridylate synthase 1 | 0.012 | |
Amh | anti-Mullerian hormone | 0.011 | |
Srxn1 | sulfiredoxin 1 homolog (S. cerevisiae) | 0.011 | |
Dcxr | dicarbonyl L-xylulose reductase | 0.011 | |
Gckr | glucokinase (hexokinase 4) regulator | 0.011 | |
Khk | ketohexokinase | 0.011 | |
Slco1b3 | solute carrier organic anion transporter family, member 1b3 | 0.011 | |
Dhfr | dihydrofolate reductase | 0.011 | |
Hal | histidine ammonia lyase | 0.011 | |
Adh1 | alcohol dehydrogenase 1 (class I) | 0.011 | |
Gclc | glutamate-cysteine ligase, catalytic subunit | 0.010 | |
Sult1a1 | sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 | 0.010 | |
Dpyd | dihydropyrimidine dehydrogenase | 0.010 | |
RGD1564865 | similar to 20-alpha-hydroxysteroid dehydrogenase | 0.010 | |
Mocs1 | molybdenum cofactor synthesis 1 | 0.010 | |
Haao | 3-hydroxyanthranilate 3,4-dioxygenase | 0.010 |