The network for 'transcription dependent tethering of rna polymerase ii gene dna at nuclear periphery' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

transcription dependent tethering of rna polymerase ii gene dna at nuclear periphery

The chromosome organization process in which the DNA sequence containing a gene transcribed by RNA polymerase II is maintained in a specific location at the nuclear periphery. In S. cerevisiae, this process involves cis-acting DNA sequences such as the TATA box and upstream activating sequence (UAS) elements, trans-acting transcriptional activators, and also the 3'-UTR of the transcript.

Name Description Probability Func Analog Organism
NUP145 Nup145p 0.837
NUP60 Nup60p 0.828
NUP120 Nup120p 0.786
MEX67 Mex67p 0.610
NUP159 Nup159p 0.587
SAC3 Sac3p 0.550
NUP133 Nup133p 0.530
NUP116 Nup116p 0.512
NUP82 Nup82p 0.363
NSP1 Nsp1p 0.319
GLE1 Gle1p 0.292
NUP170 Nup170p 0.284
NUP157 Nup157p 0.245
MLP1 Mlp1p 0.199
NUP100 Nup100p 0.175
RRP6 Rrp6p 0.160
POM152 Pom152p 0.150
SUS1 Sus1p 0.143
NUP85 Nup85p 0.128
NUP188 Nup188p 0.118
TAF8 Taf8p 0.101
DIS3 Dis3p 0.075
NUP49 Nup49p 0.064
NUP53 Nup53p 0.064
NIC96 Nic96p 0.062
MMS1 Mms1p 0.055
NUP84 Nup84p 0.047
THP2 Thp2p 0.045
SPC110 Spc110p 0.045
NUP1 Nup1p 0.042
YLR264C-A hypothetical protein 0.039
SRD1 Srd1p 0.039
ADA2 Ada2p 0.039
MAD1 Mad1p 0.038
CUP1-1 Cup1-1p 0.035
LEU2 Leu2p 0.035
YAR068W hypothetical protein 0.034
ARG8 Arg8p 0.034
MLP2 Mlp2p 0.033
SPL2 Spl2p 0.033
HO Hop 0.031
YLR162W hypothetical protein 0.030
SWT1 Swt1p 0.030
YOL038C-A hypothetical protein 0.030
MER1 Mer1p 0.029
YIR035C hypothetical protein 0.028
SCY1 Scy1p 0.028
ARP10 Arp10p 0.028
YLR042C hypothetical protein 0.027
SRP72 Srp72p 0.027
URA3 Ura3p 0.026
TRA1 Tra1p 0.025
MAK10 Mak10p 0.024
GEA2 Gea2p 0.024
SWC7 Swc7p 0.024
UBP8 Ubp8p 0.024
ATP6 Atp6p 0.024
YPR157W hypothetical protein 0.024
YAR066W hypothetical protein 0.023
YMR259C hypothetical protein 0.023
ZPS1 Zps1p 0.022
PRS2 Prs2p 0.022
AQY2 Aqy2p 0.022
HXT3 Hxt3p 0.021
AUA1 Aua1p 0.021
KAP120 Kap120p 0.020
NOP10 Nop10p 0.020
YOL013W-A hypothetical protein 0.020
BSC1 Bsc1p 0.020
IZH4 Izh4p 0.020
HPF1 Hpf1p 0.020
CHA1 Cha1p 0.020
AAT1 Aat1p 0.019
MF(ALPHA)2 Mf(alpha)2p 0.019
FMT1 Fmt1p 0.019
SCC4 Scc4p 0.019
YBR013C hypothetical protein 0.019
DAL81 Dal81p 0.019
YHL026C hypothetical protein 0.017
ADH2 Adh2p 0.017
SEH1 Seh1p 0.017
SCM4 Scm4p 0.017
TOP1 Top1p 0.017
TIP1 Tip1p 0.017
OPT2 Opt2p 0.017
PHM6 Phm6p 0.017
YAL037C-A hypothetical protein 0.017
YLL053C hypothetical protein 0.017
RIO1 Rio1p 0.017
HFI1 Hfi1p 0.017
YLR040C hypothetical protein 0.016
CPD1 Cpd1p 0.016
CAR1 Car1p 0.016
DIC1 Dic1p 0.016
RSA1 Rsa1p 0.016
UPS3 Ups3p 0.016
BNA4 Bna4p 0.016
YJL181W hypothetical protein 0.016
WSS1 Wss1p 0.016
TSC3 Tsc3p 0.016
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Caenorhabditis elegans
Name Description Probability Func Analog Organism
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Danio rerio
Name Description Probability Func Analog Organism
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Drosophila melanogaster
Name Description Probability Func Analog Organism
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Homo sapiens
Name Description Probability Func Analog Organism
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Mus musculus
Name Description Probability Func Analog Organism
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Rattus norvegicus
Name Description Probability Func Analog Organism