The network for 'protein dna complex assembly' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

protein dna complex assembly

The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex.

Saccharomyces cerevisiae
Name Description Probability Func Analog Organism
HHT1 Hht1p 1.000
ORC1 Orc1p 0.998
SPT15 Spt15p 0.997
RLF2 Rlf2p 0.989
TAF4 Taf4p 0.987
POB3 Pob3p 0.986
HHF1 Hhf1p 0.985
HTB1 Htb1p 0.969
ORC6 Orc6p 0.965
HIR1 Hir1p 0.951
ASF1 Asf1p 0.950
RTT106 Rtt106p 0.942
TAF6 Taf6p 0.939
MCM6 Mcm6p 0.938
ORC5 Orc5p 0.936
HAT1 Hat1p 0.935
HTB2 Htb2p 0.930
TAF10 Taf10p 0.881
HHT2 Hht2p 0.878
DBF4 Dbf4p 0.872
HAT2 Hat2p 0.858
CAC2 Cac2p 0.849
MCM3 Mcm3p 0.848
MCM2 Mcm2p 0.843
HIF1 Hif1p 0.842
SHU1 Shu1p 0.822
ORC3 Orc3p 0.806
ORC2 Orc2p 0.798
MCM5 Mcm5p 0.761
PSY3 Psy3p 0.760
HPC2 Hpc2p 0.740
MCM4 Mcm4p 0.739
BUR6 Bur6p 0.720
TAF3 Taf3p 0.707
SHU2 Shu2p 0.704
MOT1 Mot1p 0.696
RAD54 Rad54p 0.688
SRB6 Srb6p 0.686
RSC8 Rsc8p 0.685
ORC4 Orc4p 0.662
SPT8 Spt8p 0.635
HTA1 Hta1p 0.633
CKA1 Cka1p 0.633
TAF12 Taf12p 0.623
TAF7 Taf7p 0.597
CSM2 Csm2p 0.586
HIR3 Hir3p 0.563
HTA2 Hta2p 0.523
TAF5 Taf5p 0.521
HHF2 Hhf2p 0.519
IPL1 Ipl1p 0.515
SPT16 Spt16p 0.510
MED2 Med2p 0.506
MCM7 Mcm7p 0.495
CLB5 Clb5p 0.452
HHO1 Hho1p 0.415
FUN30 Fun30p 0.408
HIR2 Hir2p 0.393
RRN9 Rrn9p 0.392
TOA2 Toa2p 0.382
RFA1 Rfa1p 0.380
BRF1 Brf1p 0.375
NOC3 Noc3p 0.365
BDF1 Bdf1p 0.359
TAF9 Taf9p 0.349
SAE3 Sae3p 0.339
SPT2 Spt2p 0.335
TAH11 Tah11p 0.334
RPT5 Rpt5p 0.319
BDF2 Bdf2p 0.314
SRB4 Srb4p 0.312
IPI3 Ipi3p 0.306
RAD55 Rad55p 0.294
RPN13 Rpn13p 0.285
MCM10 Mcm10p 0.280
MED1 Med1p 0.272
RPT6 Rpt6p 0.271
RPT1 Rpt1p 0.263
MTC1 Mtc1p 0.257
TAF11 Taf11p 0.255
CSE2 Cse2p 0.249
CDC45 Cdc45p 0.235
PSH1 Psh1p 0.231
RPN10 Rpn10p 0.228
MIF2 Mif2p 0.226
SRB2 Srb2p 0.222
SAS4 Sas4p 0.221
CBF1 Cbf1p 0.221
MED7 Med7p 0.218
RPT3 Rpt3p 0.206
TAF8 Taf8p 0.202
RAD23 Rad23p 0.198
SAS2 Sas2p 0.184
RTT109 Rtt109p 0.179
CSE4 Cse4p 0.176
SNF5 Snf5p 0.175
RPN6 Rpn6p 0.171
MED8 Med8p 0.170
GAL11 Gal11p 0.169
KAP114 Kap114p 0.167
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Caenorhabditis elegans
Name Description Probability Func Analog Organism
cdl-1 Protein CDL-1 0.128
rpn-7 Protein RPN-7 0.090
bub-1 Protein BUB-1 0.078
rfc-3 Protein RFC-3 0.077
let-858 Protein LET-858 0.071
nst-1 Protein NST-1 0.062
crn-3 Protein CRN-3 0.055
air-2 Protein AIR-2 0.049
tag-135 Protein TAG-135 0.047
hcp-3 Protein HCP-3 0.045
Y42H9B.3 Protein Y42H9B.3 0.044
ndc-80 Protein NDC-80 0.042
dnj-11 Protein DNJ-11 0.041
lin-53 Protein LIN-53 0.038
plp-1 Protein PLP-1 0.037
cosa-1 Protein COSA-1 0.034
cec-5 Protein CEC-5 0.031
nud-1 Protein NUD-1 0.028
rpb-2 Protein RPB-2 0.027
cec-4 Protein CEC-4 0.027
CELE_Y23H5A.3 Protein Y23H5A.3 0.026
R04F11.3 Protein R04F11.3 0.025
zyg-1 Protein ZYG-1 0.025
exo-3 Protein EXO-3 0.023
T05B9.1 Protein T05B9.1 0.022
ran-1 Protein RAN-1 0.022
W06B4.1 Protein W06B4.1 0.022
pqn-59 Protein PQN-59 0.021
F25B5.2 Protein F25B5.2 0.021
fcp-1 Protein FCP-1 0.021
C56G2.7 Protein C56G2.7 0.020
klp-16 Protein KLP-16 0.020
npl-4.2 Protein NPL-4.2 0.020
rpt-2 Protein RPT-2 0.020
C52B9.8 Protein C52B9.8 0.019
rnr-1 Protein RNR-1 0.019
spt-5 Protein SPT-5 0.019
capg-2 Protein CAPG-2 0.019
sas-5 Protein SAS-5 0.019
CELE_F25B4.5 Protein F25B4.5 0.018
lin-35 Protein LIN-35 0.018
B0511.6 Protein B0511.6 0.018
sqv-4 Protein SQV-4 0.018
rfp-1 Protein RFP-1 0.018
M03C11.8 Protein M03C11.8 0.016
mdf-2 Protein MDF-2 0.016
dnj-19 Protein DNJ-19 0.015
mes-6 Protein MES-6 0.015
mcm-7 Protein MCM-7 0.015
zen-4 Protein ZEN-4 0.014
B0261.7 Protein B0261.7 0.013
CELE_Y111B2A.3 Protein Y111B2A.3 0.013
scc-1 Protein SCC-1 0.012
him-10 Protein HIM-10 0.012
mep-1 Protein MEP-1 0.012
C15C6.4 Protein C15C6.4 0.012
fkb-6 Protein FKB-6 0.012
F55A3.3 Protein F55A3.3 0.011
F25D7.4 Protein F25D7.4 0.011
F54E7.8 Protein F54E7.8 0.011
F20A1.9 Protein F20A1.9 0.011
tba-1 Protein TBA-1 0.011
CELE_C24H12.5 Protein C24H12.5 0.011
CELE_F17C11.10 Protein F17C11.10 0.010
cdt-1 Protein CDT-1 0.010
C16A3.4 Protein C16A3.4 0.010
C16A11.4 Protein C16A11.4 0.010
glh-4 Protein GLH-4 0.010
hil-4 Protein HIL-4 0.010
sdc-2 Protein SDC-2 0.010
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Danio rerio
Name Description Probability Func Analog Organism
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Drosophila melanogaster
Name Description Probability Func Analog Organism
Pros26.4 Proteasome 26S subunit subunit 4 ATPase 0.894
Mcm7 Minichromosome maintenance 7 0.784
CG18764 CG18764 gene product from transcript CG18764-RA 0.764
Rpt3 CG16916 gene product from transcript CG16916-RA 0.735
Fs(2)Ket Female sterile (2) Ketel 0.638
Rpn11 CG18174 gene product from transcript CG18174-RA 0.602
His2Av Histone H2A variant 0.601
Ndc80 CG9938 gene product from transcript CG9938-RA 0.552
CDC45L CG3658 gene product from transcript CG3658-RA 0.516
CG5384 CG5384 gene product from transcript CG5384-RA 0.367
RnrL Ribonucleoside diphosphate reductase large subunit 0.337
bab2 CG9102 gene product from transcript CG9102-RA 0.326
MRG15 CG6363 gene product from transcript CG6363-RA 0.323
CG10630 CG10630 gene product from transcript CG10630-RA 0.321
His4:CG33905 CG33905 gene product from transcript CG33905-RA 0.313
His4:CG33877 CG33877 gene product from transcript CG33877-RA 0.310
SuUR Suppressor of Under-Replication 0.305
His4:CG33903 CG33903 gene product from transcript CG33903-RA 0.304
CG3430 CG3430 gene product from transcript CG3430-RA 0.300
His4:CG33901 CG33901 gene product from transcript CG33901-RA 0.294
Mcm5 Minichromosome maintenance 5 0.289
lute CG5319 gene product from transcript CG5319-RA 0.265
smt3 CG4494 gene product from transcript CG4494-RA 0.230
Spc25 CG7242 gene product from transcript CG7242-RA 0.229
Nuf2 CG8902 gene product from transcript CG8902-RA 0.206
Prosbeta7 Proteasome beta7 subunit 0.204
CG12942 CG12942 gene product from transcript CG12942-RA 0.198
asun asunder 0.196
BRWD3 CG31132 gene product from transcript CG31132-RA 0.196
His4:CG33881 CG33881 gene product from transcript CG33881-RA 0.193
His4:CG33887 CG33887 gene product from transcript CG33887-RA 0.193
Slbp Stem-loop binding protein 0.191
His4:CG33907 CG33907 gene product from transcript CG33907-RA 0.189
Orc2 Origin recognition complex subunit 2 0.188
mus101 mutagen-sensitive 101 0.184
RfC38 Replication factor C 38kD subunit 0.182
His4:CG33891 CG33891 gene product from transcript CG33891-RA 0.180
His4:CG33895 CG33895 gene product from transcript CG33895-RA 0.180
His4:CG33889 CG33889 gene product from transcript CG33889-RA 0.178
wde windei 0.178
His4:CG33909 CG33909 gene product from transcript CG33909-RA 0.176
Dll Distal-less 0.171
His4:CG33883 CG33883 gene product from transcript CG33883-RA 0.166
His4:CG33885 CG33885 gene product from transcript CG33885-RA 0.166
His4:CG33879 CG33879 gene product from transcript CG33879-RA 0.166
Mcm10 Sensitized chromosome inheritance modifier 19 0.164
CG2183 CG2183 gene product from transcript CG2183-RA 0.160
dnk deoxyribonucleoside kinase 0.159
His4:CG33897 CG33897 gene product from transcript CG33897-RA 0.158
His4:CG33893 CG33893 gene product from transcript CG33893-RA 0.158
His4:CG33899 CG33899 gene product from transcript CG33899-RA 0.154
mars CG17064 gene product from transcript CG17064-RB 0.154
SF1 Splicing factor 1 0.151
GstD6 Glutathione S transferase D6 0.148
CG12883 CG12883 gene product from transcript CG12883-RA 0.147
cdc2c CG10498 gene product from transcript CG10498-RC 0.141
Dref DNA replication-related element factor 0.140
Gbeta13F G protein beta-subunit 13F 0.137
RfC3 Replication factor C subunit 3 0.133
CG9894 CG9894 gene product from transcript CG9894-RB 0.133
CG32458 CG32458 gene product from transcript CG32458-RA 0.129
Sas-4 CG10061 gene product from transcript CG10061-RA 0.128
CG42308 CG42308 gene product from transcript CG42308-RA 0.127
CG15141 CG15141 gene product from transcript CG15141-RA 0.125
cal1 chromosome alignment defect 1 0.123
CG13472 CG13472 gene product from transcript CG13472-RA 0.119
DNApol-delta DNA-polymerase-delta 0.116
Caf1 Chromatin assembly factor 1 subunit 0.115
TfIIA-L Transcription factor IIA L 0.113
CG1440 CG1440 gene product from transcript CG1440-RA 0.113
cyp33 cyclophilin-33 0.112
CG32418 CG32418 gene product from transcript CG32418-RA 0.112
Vps16B Vacuolar protein sorting 16B 0.111
CG9135 CG9135 gene product from transcript CG9135-RB 0.111
Snr1 Snf5-related 1 0.110
Rpn2 CG11888 gene product from transcript CG11888-RA 0.109
Rpb4 CG33520 gene product from transcript CG33520-RF 0.109
stwl stonewall 0.108
CG3226 CG3226 gene product from transcript CG3226-RA 0.107
Sgf29 CG30390 gene product from transcript CG30390-RA 0.107
chm chameau 0.106
Prp19 CG5519 gene product from transcript CG5519-RA 0.106
CG34244 CG34244 gene product from transcript CG34244-RA 0.106
Antp Antennapedia 0.105
pav pavarotti 0.105
Mes4 CG11301 gene product from transcript CG11301-RB 0.104
rod rough deal 0.103
CG11188 CG11188 gene product from transcript CG11188-RA 0.100
CG6066 CG6066 gene product from transcript CG6066-RA 0.100
CG1965 CG1965 gene product from transcript CG1965-RA 0.096
Cenp-C CG31258 gene product from transcript CG31258-RA 0.094
tos tosca 0.093
CG8108 CG8108 gene product from transcript CG8108-RA 0.092
CG6758 CG6758 gene product from transcript CG6758-RA 0.092
CG14120 CG14120 gene product from transcript CG14120-RA 0.092
CG6654 CG6654 gene product from transcript CG6654-RA 0.092
CG13350 CG13350 gene product from transcript CG13350-RA 0.088
His4:CG33869 CG33869 gene product from transcript CG33869-RA 0.088
CG32392 CG32392 gene product from transcript CG32392-RB 0.086
Rab9Db Rab GTPase 9Db 0.086
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Homo sapiens
Name Description Probability Func Analog Organism
TBP TATA box binding protein 1.000
CBX5 chromobox homolog 5 1.000
CHAF1A chromatin assembly factor 1, subunit A (p150) 0.998
HIST1H3B histone cluster 1, H3b 0.998
SET SET nuclear oncogene 0.997
TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa 0.996
HIST1H3D histone cluster 1, H3d 0.994
CDK2 cyclin-dependent kinase 2 0.992
CBX3 chromobox homolog 3 0.989
ASF1B ASF1 anti-silencing function 1 homolog B (S. cerevisiae) 0.989
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.988
MCM2 minichromosome maintenance complex component 2 0.988
SUMO2 SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae) 0.978
ORC3 origin recognition complex, subunit 3 0.978
CBX1 chromobox homolog 1 0.977
MCM4 minichromosome maintenance complex component 4 0.973
MCM7 minichromosome maintenance complex component 7 0.971
HIST1H4A histone cluster 1, H4a 0.952
MCM6 minichromosome maintenance complex component 6 0.949
HDAC2 histone deacetylase 2 0.939
PAX3 paired box 3 0.937
RBBP4 retinoblastoma binding protein 4 0.936
ORC2 origin recognition complex, subunit 2 0.931
TAF1A TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa 0.923
HIST1H2AM histone cluster 1, H2am 0.905
SSRP1 structure specific recognition protein 1 0.903
TAF1C TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa 0.898
MCM3 minichromosome maintenance complex component 3 0.887
NSL1 NSL1, MIND kinetochore complex component, homolog (S. cerevisiae) 0.879
HIST1H2AB histone cluster 1, H2ab 0.877
HIST1H3A histone cluster 1, H3a 0.867
HIST1H2AE histone cluster 1, H2ae 0.865
RAD51L1 RAD51-like 1 (S. cerevisiae) 0.861
HIST1H2AJ histone cluster 1, H2aj 0.851
PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 0.850
HIST1H4D histone cluster 1, H4d 0.848
CDC7 cell division cycle 7 homolog (S. cerevisiae) 0.841
HIST1H4F histone cluster 1, H4f 0.838
CHAF1B chromatin assembly factor 1, subunit B (p60) 0.835
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.830
TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa 0.823
SMAD4 SMAD family member 4 0.822
TAF9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa 0.819
HIST1H2AI histone cluster 1, H2ai 0.808
ORC1 origin recognition complex, subunit 1 0.804
TAF1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa 0.804
HIST2H2BE histone cluster 2, H2be 0.800
HIST1H1C histone cluster 1, H1c 0.793
CENPA centromere protein A 0.772
HIST1H4B histone cluster 1, H4b 0.765
RAD51C RAD51 homolog C (S. cerevisiae) 0.749
POLE3 polymerase (DNA directed), epsilon 3 (p17 subunit) 0.723
CDAN1 congenital dyserythropoietic anemia, type I 0.723
HIST1H2AL histone cluster 1, H2al 0.718
RBBP7 retinoblastoma binding protein 7 0.713
HIST1H2BG histone cluster 1, H2bg 0.707
ORC6 origin recognition complex, subunit 6 0.690
XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2 0.668
MCM10 minichromosome maintenance complex component 10 0.657
LBR lamin B receptor 0.652
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 0.639
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.636
TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa 0.636
HIST1H2BB histone cluster 1, H2bb 0.608
HIST1H4E histone cluster 1, H4e 0.601
MMS22L MMS22-like, DNA repair protein 0.561
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.560
RAD51L3 RAD51-like 3 (S. cerevisiae) 0.557
RXRA retinoid X receptor, alpha 0.553
HIST1H3G histone cluster 1, H3g 0.550
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 0.535
DUT deoxyuridine triphosphatase 0.529
TAF1B TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa 0.519
HDAC1 histone deacetylase 1 0.517
HIST4H4 histone cluster 4, H4 0.516
H3F3A H3 histone, family 3A 0.511
WRN Werner syndrome, RecQ helicase-like 0.487
H2AFZ H2A histone family, member Z 0.485
GTF2A2 general transcription factor IIA, 2, 12kDa 0.446
MCM5 minichromosome maintenance complex component 5 0.438
HIST1H4H histone cluster 1, H4h 0.435
SRSF3 serine/arginine-rich splicing factor 3 0.420
CDK9 cyclin-dependent kinase 9 0.416
CDC6 cell division cycle 6 homolog (S. cerevisiae) 0.415
NASP nuclear autoantigenic sperm protein (histone-binding) 0.390
HIST1H2BM histone cluster 1, H2bm 0.390
DAXX death-domain associated protein 0.378
UBE2I ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast) 0.354
ASF1A ASF1 anti-silencing function 1 homolog A (S. cerevisiae) 0.348
PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 0.346
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 0.343
HIST1H2BJ histone cluster 1, H2bj 0.342
TAF12 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa 0.341
POGZ pogo transposable element with ZNF domain 0.334
HIST1H3C histone cluster 1, H3c 0.325
RB1 retinoblastoma 1 0.319
BAZ1B bromodomain adjacent to zinc finger domain, 1B 0.310
NBN nibrin 0.307
TAF10 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa 0.301
NAP1L1 nucleosome assembly protein 1-like 1 0.289
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Mus musculus
Name Description Probability Func Analog Organism
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Rattus norvegicus
Name Description Probability Func Analog Organism