The network for 'mrna processing' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

mrna processing

Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.

Saccharomyces cerevisiae
Name Description Probability Func Analog Organism
BRR2 Brr2p 1.000
PRP8 Prp8p 1.000
PRP19 Prp19p 1.000
CEF1 Cef1p 1.000
CUS1 Cus1p 1.000
CLF1 Clf1p 1.000
SMD2 Smd2p 1.000
SNU114 Snu114p 1.000
LEA1 Lea1p 1.000
SMB1 Smb1p 1.000
SMD1 Smd1p 1.000
SMD3 Smd3p 1.000
CWC2 Cwc2p 1.000
HSH155 Hsh155p 1.000
SMX3 Smx3p 1.000
SYF1 Syf1p 1.000
RSE1 Rse1p 1.000
PRP2 Prp2p 1.000
SNT309 Snt309p 1.000
SPP382 Spp382p 1.000
SMX2 Smx2p 0.999
PRP4 Prp4p 0.999
PRP46 Prp46p 0.999
PRP31 Prp31p 0.999
SPT5 Spt5p 0.999
BUD13 Bud13p 0.997
PRP45 Prp45p 0.997
SNU66 Snu66p 0.996
STO1 Sto1p 0.996
PRP9 Prp9p 0.996
SLU7 Slu7p 0.995
PRP3 Prp3p 0.995
LSM3 Lsm3p 0.995
ISY1 Isy1p 0.993
PAP1 Pap1p 0.991
RNA14 Rna14p 0.991
PFS2 Pfs2p 0.990
CCR4 Ccr4p 0.988
YSH1 Ysh1p 0.988
PRP11 Prp11p 0.988
SPP381 Spp381p 0.987
SME1 Sme1p 0.987
RPO21 Rpo21p 0.986
PRP6 Prp6p 0.984
CFT2 Cft2p 0.983
IST3 Ist3p 0.982
PRP21 Prp21p 0.981
YJU2 Yju2p 0.978
SYF2 Syf2p 0.977
PRP16 Prp16p 0.976
POP7 Pop7p 0.975
PRP43 Prp43p 0.974
CWC21 Cwc21p 0.972
POP4 Pop4p 0.972
LUC7 Luc7p 0.965
CDC40 Cdc40p 0.958
PTA1 Pta1p 0.954
PAB1 Pab1p 0.953
MPE1 Mpe1p 0.952
ECM2 Ecm2p 0.942
YHC1 Yhc1p 0.937
SNP1 Snp1p 0.930
PRP22 Prp22p 0.930
FIP1 Fip1p 0.930
SNU23 Snu23p 0.924
PUB1 Pub1p 0.920
LSM8 Lsm8p 0.919
PCF11 Pcf11p 0.919
SNU71 Snu71p 0.914
BUD31 Bud31p 0.913
MFT1 Mft1p 0.909
SNM1 Snm1p 0.908
TIF4632 Tif4632p 0.906
SNU56 Snu56p 0.903
NAM7 Nam7p 0.901
CWC22 Cwc22p 0.890
LSM2 Lsm2p 0.878
CWC23 Cwc23p 0.871
YJR084W hypothetical protein 0.860
PRP39 Prp39p 0.839
URN1 Urn1p 0.837
LSM4 Lsm4p 0.837
NAM8 Nam8p 0.836
PTI1 Pti1p 0.833
POP1 Pop1p 0.829
LSM7 Lsm7p 0.825
BRR1 Brr1p 0.822
CFT1 Cft1p 0.820
POP6 Pop6p 0.818
POP5 Pop5p 0.816
CTR9 Ctr9p 0.810
MUD2 Mud2p 0.809
SUS1 Sus1p 0.793
CBC2 Cbc2p 0.774
REF2 Ref2p 0.770
RNA15 Rna15p 0.762
NTC20 Ntc20p 0.757
RMP1 Rmp1p 0.745
KEM1 Kem1p 0.738
MSL1 Msl1p 0.718
Loading network...
Caenorhabditis elegans
Name Description Probability Func Analog Organism
rsp-1 Protein RSP-1 0.368
rsp-8 Protein RSP-8 0.339
snr-4 Protein SNR-4 0.268
cacn-1 Protein CACN-1 0.248
snr-1 Protein SNR-1 0.228
prp-21 Protein PRP-21 0.210
emb-5 Protein EMB-5 0.184
aly-3 Protein ALY-3 0.177
cul-1 Protein CUL-1 0.156
snr-6 Protein SNR-6 0.155
T28D9.1 Protein T28D9.1 0.149
eya-1 Protein EYA-1 0.113
snr-7 Protein SNR-7 0.112
mag-1 Protein MAG-1 0.112
lst-3 Protein LST-3 0.111
CELE_B0285.3 Protein B0285.3 0.110
wdr-5.1 Protein WDR-5.1 0.108
hrp-1 Protein HRP-1 0.105
rnp-5 Protein RNP-5 0.104
dpy-30 Protein DPY-30 0.103
snr-2 Protein SNR-2 0.093
npp-4 Protein NPP-4 0.089
ned-8 Protein NED-8 0.089
uaf-2 Protein UAF-2 0.086
B0464.2 Protein B0464.2 0.085
F58E10.3 Protein F58E10.3 0.080
CELE_W03F9.10 Protein W03F9.10 0.079
skr-2 Protein SKR-2 0.076
lsm-5 Protein LSM-5 0.070
fipp-1 Protein FIPP-1 0.069
D1081.8 Protein D1081.8 0.065
snr-5 Protein SNR-5 0.063
lsm-7 Protein LSM-7 0.060
rpb-11 Protein RPB-11 0.060
F26B1.2 Protein F26B1.2 0.058
rsp-6 Protein RSP-6 0.056
rpb-6 Protein RPB-6 0.055
ifet-1 Protein IFET-1 0.055
taf-4 Protein TAF-4 0.053
rpb-10 Protein RPB-10 0.049
prg-1 Protein PRG-1 0.043
H06I04.3 Protein H06I04.3 0.043
pabp-2 Protein PABP-2 0.040
cyn-12 Protein CYN-12 0.039
snr-3 Protein SNR-3 0.039
CELE_D1054.14 Protein D1054.14 0.036
eif-6 Protein EIF-6 0.035
rbx-1 Protein RBX-1 0.035
rpb-12 Protein RPB-12 0.035
F08B4.7 Protein F08B4.7 0.035
spr-5 Protein SPR-5 0.033
B0035.1 Protein B0035.1 0.033
usp-14 Protein USP-14 0.033
rnp-4 Protein RNP-4 0.033
adr-1 Protein ADR-1 0.032
acin-1 Protein ACIN-1 0.032
CELE_C17E4.6 Protein C17E4.6 0.032
C18A3.3 Protein C18A3.3 0.031
spk-1 Protein SPK-1 0.031
hel-1 Protein HEL-1 0.031
ccr-4 Protein CCR-4 0.029
acs-4 Protein ACS-4 0.029
set-2 Protein SET-2 0.029
ran-1 Protein RAN-1 0.029
gly-10 Protein GLY-10 0.029
repo-1 Protein REPO-1 0.029
skp-1 Protein SKP-1 0.029
lsm-4 Protein LSM-4 0.028
sago-2 Protein SAGO-2 0.028
asd-1 Protein ASD-1 0.028
rnp-7 Protein RNP-7 0.028
W04B5.5 Protein W04B5.5 0.027
dao-5 Protein DAO-5 0.027
CELE_F19F10.9 Protein F19F10.9 0.027
rnp-3 Protein RNP-3 0.026
ztf-4 Protein ZTF-4 0.025
F55F8.9 Protein F55F8.9 0.025
rsp-5 Protein RSP-5 0.025
F39H11.1 Protein F39H11.1 0.025
C44E4.4 Protein C44E4.4 0.025
scc-3 Protein SCC-3 0.025
dcn-1 Protein DCN-1 0.024
snrp-27 Protein SNRP-27 0.024
dnj-11 Protein DNJ-11 0.023
rab-8 Protein RAB-8 0.023
F09D1.1 Protein F09D1.1 0.022
csn-1 Protein CSN-1 0.022
CELE_B0238.11 Protein B0238.11 0.022
CELE_Y59A8B.10 Protein Y59A8B.10 0.022
CELE_Y106G6D.7 Protein Y106G6D.7 0.022
cpsf-2 Protein CPSF-2 0.022
attf-2 Protein ATTF-2 0.021
smu-2 Protein SMU-2 0.020
hcp-3 Protein HCP-3 0.020
ulp-2 Protein ULP-2 0.020
eftu-2 Protein EFTU-2 0.019
kin-10 Protein KIN-10 0.019
dnj-19 Protein DNJ-19 0.019
CELE_F53H1.1 Protein F53H1.1 0.019
fkb-6 Protein FKB-6 0.019
Loading network...
Danio rerio
Name Description Probability Func Analog Organism
snrnp70 small nuclear ribonucleoprotein 70 (U1) 0.894
srsf2 serine/arginine-rich splicing factor 2 0.792
khdrbs1a KH domain containing, RNA binding, signal transduction associated 1a 0.719
snrpd3l small nuclear ribonucleoprotein D3 polypeptide, like 0.537
safb scaffold attachment factor B 0.426
zgc:77052 zgc:77052 0.377
ddx39aa DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa 0.364
zgc:112425 zgc:112425 0.353
smu1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) 0.342
tcea1 transcription elongation factor A (SII), 1 0.329
hnrpl heterogeneous nuclear ribonucleoprotein L 0.201
hnrnpab heterogeneous nuclear ribonucleoprotein A/B 0.190
snrpd1 small nuclear ribonucleoprotein D1 polypeptide 0.176
sf1 splicing factor 1 0.172
xrn2 5'-3' exoribonuclease 2 0.171
snrpb2 small nuclear ribonucleoprotein polypeptide B2 0.169
srsf11 serine/arginine-rich splicing factor 11 0.153
ints6 integrator complex subunit 6 0.145
rbmx RNA binding motif protein, X-linked 0.140
tra2a transformer-2 alpha 0.137
dag1 dystroglycan 1 0.133
api5 apoptosis inhibitor 5 0.132
cstf1 cleavage stimulation factor, 3' pre-RNA, subunit 1 0.125
ewsr1a Ewing sarcoma breakpoint region 1a 0.124
ilf2 interleukin enhancer binding factor 2 0.124
mbnl2 muscleblind-like 2 (Drosophila) 0.123
trnau1apl tRNA selenocysteine 1 associated protein 1, like 0.122
thoc1 THO complex 1 0.120
ddx39b DEAD (Asp-Glu-Ala-Asp) box polypeptide 39b 0.119
ef1a elongation factor 1-alpha 0.117
ilf3b interleukin enhancer binding factor 3b 0.114
elavl1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) 0.111
prpf39 PRP39 pre-mRNA processing factor 39 homolog (yeast) 0.109
setb SET translocation (myeloid leukemia-associated) B 0.109
smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 0.103
magoh mago-nashi homolog, proliferation-associated (Drosophila) 0.102
u2af1 U2(RNU2) small nuclear RNA auxiliary factor 1 0.100
rbm8a RNA binding motif protein 8A 0.099
srsf6a serine/arginine-rich splicing factor 6a 0.098
snrpc small nuclear ribonucleoprotein polypeptide C 0.089
sap18 sin3-associated polypeptide 0.086
taf7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor 0.085
hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 0.084
h2afv H2A histone family, member V 0.081
hnrnpa0l heterogeneous nuclear ribonucleoprotein A0, like 0.077
srrt serrate RNA effector molecule homolog (Arabidopsis) 0.076
sf3b1 splicing factor 3b, subunit 1 0.074
luc7l LUC7-like (S. cerevisiae) 0.073
hmgb2b high-mobility group box 2b 0.071
snrpa small nuclear ribonucleoprotein polypeptide A 0.071
srsf6b serine/arginine-rich splicing factor 6b 0.070
smx5 smx5 0.070
im:7153552 im:7153552 0.069
rbm39a RNA binding motif protein 39a 0.067
snrpd3 small nuclear ribonucleoprotein D3 polypeptide 0.067
med18 mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) 0.066
anp32e acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.063
rbm4.2 RNA binding motif protein 4.2 0.063
hnrnph1l heterogeneous nuclear ribonucleoprotein H1, like 0.062
phf5a PHD finger protein 5A 0.061
si:ch211-59d15.5 si:ch211-59d15.5 0.059
sf3b5 splicing factor 3b, subunit 5 0.058
hnrnpul1 heterogeneous nuclear ribonucleoprotein U-like 1 0.058
supt6h suppressor of Ty 6 homolog 0.058
prpf8 pre-mRNA processing factor 8 0.057
ddx19 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) 0.055
srsf4 serine/arginine-rich splicing factor 4 0.054
ctnnbl1 catenin, beta like 1 0.053
zgc:56409 zgc:56409 0.052
zgc:86598 zgc:86598 0.052
rbm4.3 RNA binding motif protein 4.3 0.049
ppp2r2d protein phosphatase 2, regulatory subunit B, delta isoform 0.049
zfr zinc finger RNA binding protein 0.048
dhx16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 0.047
tardbp TAR DNA binding protein 0.047
sfrs3b splicing factor, arginine/serine-rich 3b 0.046
rbm17 RNA binding motif protein 17 0.045
puf60b poly-U binding splicing factor b 0.044
eif4a1a eukaryotic translation initiation factor 4A, isoform 1A 0.044
ubtf upstream binding transcription factor, RNA polymerase I 0.043
hnrnpm heterogeneous nuclear ribonucleoprotein M 0.043
cwf19l1 CWF19-like 1, cell cycle control 0.041
ddx46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 0.040
eif4a3 eukaryotic translation initiation factor 4A, isoform 3 0.039
wdr82 WD repeat domain containing 82 0.039
epb41l5 erythrocyte membrane protein band 4.1 like 5 0.039
ddx42 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 0.039
cpsf2 cleavage and polyadenylation specific factor 2 0.038
hnrpdl heterogeneous nuclear ribonucleoprotein D-like 0.038
prmt7 protein arginine N-methyltransferase 7 0.037
si:dkey-181m9.9 si:dkey-181m9.9 0.037
caprin1a cell cycle associated protein 1a 0.037
cenph centromere protein H 0.036
gins3 GINS complex subunit 3 0.036
puf60a poly-U binding splicing factor a 0.036
acvr1l activin A receptor, type I like 0.035
zgc:55695 zgc:55695 0.035
hnrnpl2 heterogeneous nuclear ribonucleoprotein L2 0.035
mapkapk2a mitogen-activated protein kinase-activated protein kinase 2a 0.035
org oogenesis-related gene 0.034
Loading network...
Drosophila melanogaster
Name Description Probability Func Analog Organism
14-3-3epsilon CG31196 gene product from transcript CG31196-RA 0.894
Mfap1 Microfibril-associated protein 1 0.864
ecd ecdysoneless 0.777
Pen Pendulin 0.773
U2af50 U2 small nuclear riboprotein auxiliary factor 50 0.754
lark CG8597 gene product from transcript CG8597-RD 0.710
bl bancal 0.594
U2af38 U2 small nuclear riboprotein auxiliary factor 38 0.593
Su(var)3-3 Suppressor of variegation 3-3 0.588
snRNP-U1-70K small ribonucleoprotein particle U1 subunit 70K 0.581
snf sans fille 0.545
Bap55 Brahma associated protein 55kD 0.531
His2Av Histone H2A variant 0.528
Zn72D CG5215 gene product from transcript CG5215-RB 0.476
SmF Small ribonucleoprotein particle protein SmF 0.474
Spt6 CG12225 gene product from transcript CG12225-RA 0.468
pUf68 poly U binding factor 68kD 0.450
CG6197 CG6197 gene product from transcript CG6197-RA 0.448
ctp cut up 0.438
crn crooked neck 0.392
CG4747 CG4747 gene product from transcript CG4747-RB 0.377
CG11266 CG11266 gene product from transcript CG11266-RD 0.364
CG10333 CG10333 gene product from transcript CG10333-RA 0.363
tho2 CG31671 gene product from transcript CG31671-RA 0.339
CG4849 CG4849 gene product from transcript CG4849-RA 0.333
CG6015 CG6015 gene product from transcript CG6015-RA 0.329
UbcD2 Ubiquitin conjugating enzyme 2 0.327
CG32685 CG32685 gene product from transcript CG32685-RC 0.312
Smn survival motor neuron 0.303
CG2199 CG2199 gene product from transcript CG2199-RB 0.295
Rsf1 Repressor splicing factor 1 0.295
Nlp Nucleoplasmin 0.294
B52 CG10851 gene product from transcript CG10851-RB 0.288
sqd squid 0.284
Hel25E Helicase at 25E 0.275
ana3 anastral spindle 3 0.264
CG2021 CG2021 gene product from transcript CG2021-RA 0.261
Cpsf160 Cleavage and polyadenylation specificity factor 160 0.258
CG6686 CG6686 gene product from transcript CG6686-RB 0.251
Rat1 CG10354 gene product from transcript CG10354-RA 0.249
CG9915 CG9915 gene product from transcript CG9915-RB 0.249
Bap170 Brahma associated protein 170kD 0.247
CG10417 CG10417 gene product from transcript CG10417-RA 0.242
heph hephaestus 0.234
SF2 CG6987 gene product from transcript CG6987-RA 0.233
dco discs overgrown 0.231
CG4612 CG4612 gene product from transcript CG4612-RA 0.226
CG8108 CG8108 gene product from transcript CG8108-RA 0.224
Ard1 Arrest defective 1 0.222
Hrb98DE Heterogeneous nuclear ribonucleoprotein at 98DE 0.218
Ntf-2 Nuclear transport factor-2 0.217
Rga Regena 0.215
CG34415 CG34415 gene product from transcript CG34415-RC 0.214
CG4699 CG4699 gene product from transcript CG4699-RJ 0.213
Lam Lamin 0.200
CG3542 CG3542 gene product from transcript CG3542-RA 0.198
CG2182 CG2182 gene product from transcript CG2182-RA 0.196
Slu7 CG1420 gene product from transcript CG1420-RA 0.194
Psi P-element somatic inhibitor 0.189
CG10754 CG10754 gene product from transcript CG10754-RA 0.186
tra2 transformer 2 0.176
bel belle 0.175
Pkn Protein kinase related to protein kinase N 0.175
Nup358 Nucleoporin 358 0.174
Ars2 CG7843 gene product from transcript CG7843-RA 0.173
tsu tsunagi 0.170
CG18005 CG18005 gene product from transcript CG18005-RA 0.169
Act5C Actin 5C 0.167
CG7971 CG7971 gene product from transcript CG7971-RC 0.167
CG1240 CG1240 gene product from transcript CG1240-RA 0.165
Rbp1 RNA-binding protein 1 0.164
LSm7 CG13277 gene product from transcript CG13277-RA 0.163
otu ovarian tumor 0.162
RPA2 Replication protein A2 0.162
brm brahma 0.162
CG4751 CG4751 gene product from transcript CG4751-RA 0.158
scny scrawny 0.158
mor moira 0.157
CG8378 CG8378 gene product from transcript CG8378-RA 0.157
Atx2 Ataxin-2 0.156
gw gawky 0.155
eIF3-S10 CG9805 gene product from transcript CG9805-RA 0.155
AGO1 Argonaute-1 0.155
CG10080 CG10080 gene product from transcript CG10080-RA 0.154
Axn Axin 0.153
CG9667 CG9667 gene product from transcript CG9667-RA 0.153
sn singed 0.151
hay haywire 0.148
CG30122 CG30122 gene product from transcript CG30122-RB 0.147
HmgD High mobility group protein D 0.147
Rpb5 CG11979 gene product from transcript CG11979-RA 0.145
CG1646 CG1646 gene product from transcript CG1646-RH 0.144
CG14641 CG14641 gene product from transcript CG14641-RA 0.142
CG4785 CG4785 gene product from transcript CG4785-RA 0.141
U2A CG1406 gene product from transcript CG1406-RA 0.136
Nup50 Nucleoporin 50 0.135
SRPK CG8174 gene product from transcript CG8174-RA 0.133
l(2)37Cb lethal (2) 37Cb 0.133
Moca-cyp CG1866 gene product from transcript CG1866-RA 0.132
CG1523 CG1523 gene product from transcript CG1523-RA 0.131
Loading network...
Homo sapiens
Name Description Probability Func Analog Organism
MAGOH mago-nashi homolog, proliferation-associated (Drosophila) 1.000
EIF4A3 eukaryotic translation initiation factor 4A3 1.000
RBM10 RNA binding motif protein 10 1.000
SF3A2 splicing factor 3a, subunit 2, 66kDa 1.000
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa 1.000
U2AF1 U2 small nuclear RNA auxiliary factor 1 1.000
SRSF3 serine/arginine-rich splicing factor 3 1.000
SNRPB small nuclear ribonucleoprotein polypeptides B and B1 1.000
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 1.000
RBM8A RNA binding motif protein 8A 1.000
RNPS1 RNA binding protein S1, serine-rich domain 0.999
SRPK2 SRSF protein kinase 2 0.999
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa 0.999
SRPK1 SRSF protein kinase 1 0.999
U2AF2 U2 small nuclear RNA auxiliary factor 2 0.998
SMN1 survival of motor neuron 1, telomeric 0.998
SNRPE small nuclear ribonucleoprotein polypeptide E 0.998
PABPC1 poly(A) binding protein, cytoplasmic 1 0.998
TRA2B transformer 2 beta homolog (Drosophila) 0.998
CLNS1A chloride channel, nucleotide-sensitive, 1A 0.996
PRPF19 PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) 0.996
DHX15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 0.995
CDC5L CDC5 cell division cycle 5-like (S. pombe) 0.995
EFTUD2 elongation factor Tu GTP binding domain containing 2 0.994
SRRM1 serine/arginine repetitive matrix 1 0.993
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.993
SNRPA small nuclear ribonucleoprotein polypeptide A 0.993
PRPF38A PRP38 pre-mRNA processing factor 38 (yeast) domain containing A 0.991
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.989
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.985
YBX1 Y box binding protein 1 0.983
SRSF2 serine/arginine-rich splicing factor 2 0.983
LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.983
LSM2 LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.976
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 0.970
SNRPF small nuclear ribonucleoprotein polypeptide F 0.964
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.964
SF1 splicing factor 1 0.963
SRSF7 serine/arginine-rich splicing factor 7 0.962
HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H') 0.961
THOC4 THO complex 4 0.960
SNRPG small nuclear ribonucleoprotein polypeptide G 0.956
WWOX WW domain containing oxidoreductase 0.956
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 0.956
QKI quaking homolog, KH domain RNA binding (mouse) 0.954
ILF3 interleukin enhancer binding factor 3, 90kDa 0.951
TNRC6A trinucleotide repeat containing 6A 0.949
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.949
ILF2 interleukin enhancer binding factor 2, 45kDa 0.946
SF3B4 splicing factor 3b, subunit 4, 49kDa 0.946
PCBP2 poly(rC) binding protein 2 0.935
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.918
RTF1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 0.918
SRSF9 serine/arginine-rich splicing factor 9 0.911
SRSF10 serine/arginine-rich splicing factor 10 0.907
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 0.903
RBM39 RNA binding motif protein 39 0.898
PTBP1 polypyrimidine tract binding protein 1 0.898
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.895
LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.884
WBP11 WW domain binding protein 11 0.883
EIF2C2 eukaryotic translation initiation factor 2C, 2 0.883
LSM7 LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.879
CD2BP2 CD2 (cytoplasmic tail) binding protein 2 0.871
ATXN1 ataxin 1 0.858
BCLAF1 BCL2-associated transcription factor 1 0.852
NAA38 N(alpha)-acetyltransferase 38, NatC auxiliary subunit 0.846
YTHDC1 YTH domain containing 1 0.843
SUGP1 SURP and G patch domain containing 1 0.842
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.841
PRPF3 PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae) 0.839
DDX5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 0.826
ELAVL1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) 0.826
SRSF1 serine/arginine-rich splicing factor 1 0.826
SAFB scaffold attachment factor B 0.822
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.818
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.813
EIF2C1 eukaryotic translation initiation factor 2C, 1 0.787
PRPF8 PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae) 0.786
PRMT5 protein arginine methyltransferase 5 0.776
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa 0.768
FUBP1 far upstream element (FUSE) binding protein 1 0.760
MATR3 matrin 3 0.755
HIST2H2BE histone cluster 2, H2be 0.749
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.747
CAND1 cullin-associated and neddylation-dissociated 1 0.745
TOB1 transducer of ERBB2, 1 0.733
TARDBP TAR DNA binding protein 0.702
CNOT7 CCR4-NOT transcription complex, subunit 7 0.700
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.691
CNOT8 CCR4-NOT transcription complex, subunit 8 0.676
EIF4A1 eukaryotic translation initiation factor 4A1 0.660
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 0.651
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.649
PRPF6 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) 0.644
PRPF4 PRP4 pre-mRNA processing factor 4 homolog (yeast) 0.636
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.634
CNOT1 CCR4-NOT transcription complex, subunit 1 0.611
RBMX RNA binding motif protein, X-linked 0.608
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 0.607
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Mus musculus
Name Description Probability Func Analog Organism
Srsf1 serine/arginine-rich splicing factor 1 0.989
Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 0.989
Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) 0.977
Hnrpdl heterogeneous nuclear ribonucleoprotein D-like 0.976
Srsf7 serine/arginine-rich splicing factor 7 0.973
Fubp1 far upstream element (FUSE) binding protein 1 0.945
Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 0.898
2500003M10Rik RIKEN cDNA 2500003M10 gene 0.874
Srrt serrate RNA effector molecule homolog (Arabidopsis) 0.847
Pabpn1 poly(A) binding protein, nuclear 1 0.825
Magoh mago-nashi homolog, proliferation-associated (Drosophila) 0.798
Luc7l2 LUC7-like 2 (S. cerevisiae) 0.777
Safb scaffold attachment factor B 0.759
Srsf3 serine/arginine-rich splicing factor 3 0.718
Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 0.714
Ddx39b DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.712
Nxf1 nuclear RNA export factor 1 homolog (S. cerevisiae) 0.698
Ddx5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 0.681
Srsf2 serine/arginine-rich splicing factor 2 0.681
Safb2 scaffold attachment factor B2 0.652
Hnrnpk heterogeneous nuclear ribonucleoprotein K 0.645
Hnrnpab heterogeneous nuclear ribonucleoprotein A/B 0.635
Pnn pinin 0.635
Prmt1 protein arginine N-methyltransferase 1 0.632
Rbm8a RNA binding motif protein 8a 0.630
Akap8 A kinase (PRKA) anchor protein 8 0.616
Emg1 EMG1 nucleolar protein homolog (S. cerevisiae) 0.612
Actl6a actin-like 6A 0.609
Hnrnpd heterogeneous nuclear ribonucleoprotein D 0.609
Brd4 bromodomain containing 4 0.603
Fus fusion, derived from t(12;16) malignant liposarcoma (human) 0.591
Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 0.584
Srsf9 serine/arginine-rich splicing factor 9 0.570
Tardbp TAR DNA binding protein 0.564
Sf3b1 splicing factor 3b, subunit 1 0.554
Cdk4 cyclin-dependent kinase 4 0.547
Set SET nuclear oncogene 0.546
Phf5a PHD finger protein 5A 0.541
Ewsr1 Ewing sarcoma breakpoint region 1 0.505
Elp2 elongation protein 2 homolog (S. cerevisiae) 0.502
Srsf6 serine/arginine-rich splicing factor 6 0.492
Srsf11 serine/arginine-rich splicing factor 11 0.489
Nono non-POU-domain-containing, octamer binding protein 0.482
Rbmxrt RNA binding motif protein, X chromosome retrogene 0.473
Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 0.472
Acin1 apoptotic chromatin condensation inducer 1 0.464
Prpf38b PRP38 pre-mRNA processing factor 38 (yeast) domain containing B 0.455
Rbm10 RNA binding motif protein 10 0.439
Rbm14 RNA binding motif protein 14 0.431
Srsf5 serine/arginine-rich splicing factor 5 0.417
Arid1a AT rich interactive domain 1A (SWI-like) 0.410
Tcerg1 transcription elongation regulator 1 (CA150) 0.387
Tra2b transformer 2 beta homolog (Drosophila) 0.386
Mrpl3 mitochondrial ribosomal protein L3 0.379
Ptma prothymosin alpha 0.375
Hnrnph3 heterogeneous nuclear ribonucleoprotein H3 0.373
Snrnp40 small nuclear ribonucleoprotein 40 (U5) 0.357
Pcna proliferating cell nuclear antigen 0.357
Thoc4 THO complex 4 0.343
Erh enhancer of rudimentary homolog (Drosophila) 0.333
Anp32e acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.324
Ppp1r8 protein phosphatase 1, regulatory (inhibitor) subunit 8 0.320
Cpsf1 cleavage and polyadenylation specific factor 1 0.317
Slbp stem-loop binding protein 0.309
Srsf4 serine/arginine-rich splicing factor 4 0.307
Hnrnpf heterogeneous nuclear ribonucleoprotein F 0.306
Ppp1cc protein phosphatase 1, catalytic subunit, gamma isoform 0.288
Srek1 splicing regulatory glutamine/lysine-rich protein 1 0.284
Ilf2 interleukin enhancer binding factor 2 0.272
Hmgn1 high mobility group nucleosomal binding domain 1 0.269
Raver1 ribonucleoprotein, PTB-binding 1 0.266
Raver2 ribonucleoprotein, PTB-binding 2 0.264
Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 0.264
Xab2 XPA binding protein 2 0.263
Ptges3 prostaglandin E synthase 3 (cytosolic) 0.263
Prpf38a PRP38 pre-mRNA processing factor 38 (yeast) domain containing A 0.262
Dhx9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 0.260
Ppp2r2a protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform 0.253
Snrpa1 small nuclear ribonucleoprotein polypeptide A' 0.253
Ncoa5 nuclear receptor coactivator 5 0.252
Ptbp2 polypyrimidine tract binding protein 2 0.250
Cks2 CDC28 protein kinase regulatory subunit 2 0.247
Prnp prion protein 0.246
Clk2 CDC-like kinase 2 0.245
Rbm25 RNA binding motif protein 25 0.240
Polr2d polymerase (RNA) II (DNA directed) polypeptide D 0.239
Brd8 bromodomain containing 8 0.237
Tubgcp3 tubulin, gamma complex associated protein 3 0.235
Btg1 B-cell translocation gene 1, anti-proliferative 0.233
H3f3b H3 histone, family 3B 0.233
Parp2 poly (ADP-ribose) polymerase family, member 2 0.231
Snrnp70 small nuclear ribonucleoprotein 70 (U1) 0.230
Bms1 BMS1 homolog, ribosome assembly protein (yeast) 0.228
Ccnb1 cyclin B1 0.227
2700094K13Rik RIKEN cDNA 2700094K13 gene 0.226
Hnrnph2 heterogeneous nuclear ribonucleoprotein H2 0.221
Kdm1a lysine (K)-specific demethylase 1A 0.220
Ccnl1 cyclin L1 0.217
Ylpm1 YLP motif containing 1 0.215
Ppm1g protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform 0.214
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Rattus norvegicus
Name Description Probability Func Analog Organism
Tra2b transformer 2 beta homolog (Drosophila) 0.654
Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) 0.561
Hnrph1 heterogeneous nuclear ribonucleoprotein H1 0.505
Rnps1 ribonucleic acid binding protein S1 0.489
Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 0.253
Ccnl1 cyclin L1 0.244
Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 0.189
Sfrs5 splicing factor, arginine/serine-rich 5 0.179
Sf3a3 splicing factor 3a, subunit 3 0.178
Sfrs2 splicing factor, arginine/serine-rich 2 0.150
Sfrs1 splicing factor, arginine/serine-rich 1 0.132
Tmpo thymopoietin 0.116
Ddx17 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 0.116
Khdrbs1 KH domain containing, RNA binding, signal transduction associated 1 0.112
Rbmxrtl RNA binding motif protein, X chromosome retrogene-like 0.098
Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 0.098
Trim28 tripartite motif-containing 28 0.097
Akap8 A kinase (PRKA) anchor protein 8 0.090
Hnrpdl heterogeneous nuclear ribonucleoprotein D-like 0.089
Sfrs3 splicing factor, arginine/serine-rich 3 0.085
Clk1 CDC-like kinase 1 0.082
H3f3b H3 histone, family 3B 0.073
Hmgb2 high mobility group box 2 0.065
LOC686980 similar to arsenate resistance protein 2 0.060
Nup88 nucleoporin 88 0.048
Cand1 cullin-associated and neddylation-dissociated 1 0.046
Nasp nuclear autoantigenic sperm protein (histone-binding) 0.046
Eif3s6ip eukaryotic translation initiation factor 3, subunit 6 interacting protein 0.042
Fos FBJ osteosarcoma oncogene 0.042
Hist1h1a histone cluster 1, H1a 0.042
Smad4 SMAD family member 4 0.039
Tardbp TAR DNA binding protein 0.038
Rbm8a RNA binding motif protein 8A 0.035
Papola poly (A) polymerase alpha 0.035
Eif4h eukaryotic translation initiation factor 4H 0.034
Plrg1 pleiotropic regulator 1, PRL1 homolog (Arabidopsis) 0.034
Impdh2 IMP (inosine monophosphate) dehydrogenase 2 0.033
LOC681004 similar to GC-rich sequence DNA-binding factor homolog 0.032
Ruvbl1 RuvB-like 1 (E. coli) 0.031
Rsrc2 arginine/serine-rich coiled-coil 2 0.031
Ubb ubiquitin B 0.030
Top2a topoisomerase (DNA) II alpha 0.028
Ewsr1 Ewing sarcoma breakpoint region 1 0.027
Fus fusion (involved in t(12;16) in malignant liposarcoma) (human) 0.026
Anp32e acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.026
Sf3b1 splicing factor 3b, subunit 1 0.025
Ppp1r15a protein phosphatase 1, regulatory (inhibitor) subunit 15A 0.025
Ssb Sjogren syndrome antigen B 0.024
Junb jun B proto-oncogene 0.024
Hnrnph3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.024
Bud13 BUD13 homolog (S. cerevisiae) 0.024
Mcrs1 microspherule protein 1 0.024
Dusp1 dual specificity phosphatase 1 0.023
Dlgap1 discs, large (Drosophila) homolog-associated protein 1 0.023
Btg2 BTG family, member 2 0.021
Bcas2 breast carcinoma amplified sequence 2 0.021
Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.020
Bclaf1 BCL2-associated transcription factor 1 0.020
Wbp11 WW domain binding protein 11 0.020
Ppid peptidylprolyl isomerase D (cyclophilin D) 0.019
Zfp36 zinc finger protein 36 0.019
Cct3 chaperonin containing Tcp1, subunit 3 (gamma) 0.019
Ssrp1 structure specific recognition protein 1 0.019
Kpnb1 karyopherin (importin) beta 1 0.019
Prmt1 protein arginine methyltransferase 1 0.019
Usf2 upstream transcription factor 2, c-fos interacting 0.019
Prpf39 PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae) 0.019
Hnrnpk heterogeneous nuclear ribonucleoprotein K 0.018
Eif4a3 eukaryotic translation initiation factor 4A, isoform 3 0.018
Parp2 poly (ADP-ribose) polymerase 2 0.018
Sfrs18 splicing factor, arginine/serine-rich 18 0.018
Tp53 tumor protein p53 0.017
Ss18 synovial sarcoma translocation, Chromosome 18 0.016
Tial1 Tia1 cytotoxic granule-associated RNA binding protein-like 1 0.016
Pcna proliferating cell nuclear antigen 0.016
Sfrs6 splicing factor, arginine/serine-rich 6 0.016
Cdc5l CDC5 cell division cycle 5-like (S. pombe) 0.016
Eef2 eukaryotic translation elongation factor 2 0.015
LOC687711 similar to small nuclear ribonucleoprotein D3 0.015
Arf6 ADP-ribosylation factor 6 0.015
Pom121 nuclear pore membrane protein 121 0.015
Gja1 gap junction protein, alpha 1 0.014
Pols polymerase (DNA directed) sigma 0.014
Dhx15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 0.014
Nup54 nucleoporin 54 0.014
Mtf2 metal response element binding transcription factor 2 0.014
H2afx H2A histone family, member X 0.013
Sart1 squamous cell carcinoma antigen recognized by T cells 0.013
Luc7l2 LUC7-like 2 (S. cerevisiae) 0.013
Ptov1 prostate tumor overexpressed 1 0.013
Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 0.012
Tra2a transformer 2 alpha homolog (Drosophila) 0.012
Hdac1 histone deacetylase 1 0.012
RGD1565775 similar to RIKEN cDNA 2810403A07 0.012
Gsk3b glycogen synthase kinase 3 beta 0.012
Pnn pinin, desmosome associated protein 0.012
Lyar Ly1 antibody reactive homolog (mouse) 0.012
Cpd carboxypeptidase D 0.012
Arglu1 arginine and glutamate rich 1 0.011
Gnl3 guanine nucleotide binding protein-like 3 (nucleolar) 0.011