Saccharomyces cerevisiae

10 known processes

PAM1 (YDR251W)

Pam1p

PAM1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.489
regulation of protein kinase activity GO:0045859 67 0.444
negative regulation of macromolecule metabolic process GO:0010605 375 0.393
vesicle mediated transport GO:0016192 335 0.295
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.264
negative regulation of cellular metabolic process GO:0031324 407 0.258
dephosphorylation GO:0016311 127 0.242
regulation of phosphate metabolic process GO:0019220 230 0.233
protein phosphorylation GO:0006468 197 0.222
cellular amide metabolic process GO:0043603 59 0.204
regulation of molecular function GO:0065009 320 0.193
positive regulation of kinase activity GO:0033674 24 0.192
regulation of biological quality GO:0065008 391 0.190
macromolecule catabolic process GO:0009057 383 0.186
positive regulation of nucleic acid templated transcription GO:1903508 286 0.186
regulation of protein phosphorylation GO:0001932 75 0.186
regulation of phosphorus metabolic process GO:0051174 230 0.183
positive regulation of rna biosynthetic process GO:1902680 286 0.170
regulation of transferase activity GO:0051338 83 0.157
positive regulation of protein kinase activity GO:0045860 22 0.157
cell cycle checkpoint GO:0000075 82 0.155
positive regulation of transferase activity GO:0051347 28 0.148
phosphorylation GO:0016310 291 0.148
protein catabolic process GO:0030163 221 0.145
regulation of catalytic activity GO:0050790 307 0.144
regulation of endocytosis GO:0030100 17 0.143
positive regulation of gene expression GO:0010628 321 0.140
cation homeostasis GO:0055080 105 0.139
regulation of transport GO:0051049 85 0.131
negative regulation of cellular biosynthetic process GO:0031327 312 0.128
negative regulation of biosynthetic process GO:0009890 312 0.122
mitochondrion organization GO:0007005 261 0.117
regulation of cellular protein metabolic process GO:0032268 232 0.116
negative regulation of kinase activity GO:0033673 24 0.111
regulation of protein metabolic process GO:0051246 237 0.105
cellular carbohydrate metabolic process GO:0044262 135 0.104
regulation of phosphorylation GO:0042325 86 0.103
cellular response to chemical stimulus GO:0070887 315 0.102
homeostatic process GO:0042592 227 0.100
signal transduction GO:0007165 208 0.098
positive regulation of protein phosphorylation GO:0001934 28 0.097
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.097
single organism carbohydrate metabolic process GO:0044723 237 0.095
membrane lipid biosynthetic process GO:0046467 54 0.093
regulation of kinase activity GO:0043549 71 0.093
positive regulation of transcription dna templated GO:0045893 286 0.090
dna replication GO:0006260 147 0.089
cellular chemical homeostasis GO:0055082 123 0.089
protein dephosphorylation GO:0006470 40 0.087
positive regulation of cellular biosynthetic process GO:0031328 336 0.086
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.082
positive regulation of phosphate metabolic process GO:0045937 147 0.080
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.080
negative regulation of protein phosphorylation GO:0001933 24 0.079
regulation of catabolic process GO:0009894 199 0.077
cell communication GO:0007154 345 0.077
growth of unicellular organism as a thread of attached cells GO:0070783 105 0.076
negative regulation of rna metabolic process GO:0051253 262 0.074
dna integrity checkpoint GO:0031570 41 0.073
membrane organization GO:0061024 276 0.073
positive regulation of macromolecule metabolic process GO:0010604 394 0.073
organonitrogen compound biosynthetic process GO:1901566 314 0.072
nucleoside triphosphate catabolic process GO:0009143 329 0.072
establishment of organelle localization GO:0051656 96 0.071
proteolysis involved in cellular protein catabolic process GO:0051603 198 0.071
rna catabolic process GO:0006401 118 0.070
positive regulation of biosynthetic process GO:0009891 336 0.070
membrane lipid metabolic process GO:0006643 67 0.070
single organism catabolic process GO:0044712 619 0.068
cellular response to pheromone GO:0071444 88 0.068
cation transport GO:0006812 166 0.068
mrna catabolic process GO:0006402 93 0.068
generation of precursor metabolites and energy GO:0006091 147 0.068
regulation of anatomical structure size GO:0090066 50 0.066
dna damage checkpoint GO:0000077 29 0.066
translation GO:0006412 230 0.066
mapk cascade GO:0000165 30 0.065
energy derivation by oxidation of organic compounds GO:0015980 125 0.065
negative regulation of nucleic acid templated transcription GO:1903507 260 0.063
regulation of transmembrane transport GO:0034762 14 0.063
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 137 0.063
positive regulation of rna metabolic process GO:0051254 294 0.063
regulation of hydrolase activity GO:0051336 133 0.062
regulation of cellular component organization GO:0051128 334 0.062
negative regulation of protein kinase activity GO:0006469 23 0.061
regulation of intracellular signal transduction GO:1902531 78 0.061
mrna metabolic process GO:0016071 269 0.060
dna dependent dna replication maintenance of fidelity GO:0045005 14 0.058
proteolysis GO:0006508 268 0.057
negative regulation of cellular protein metabolic process GO:0032269 85 0.056
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.056
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.055
multi organism cellular process GO:0044764 120 0.055
cellular lipid metabolic process GO:0044255 229 0.055
negative regulation of cellular catabolic process GO:0031330 43 0.054
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.054
ion homeostasis GO:0050801 118 0.053
cellular nitrogen compound catabolic process GO:0044270 494 0.051
chemical homeostasis GO:0048878 137 0.051
cellular response to dna damage stimulus GO:0006974 287 0.050
budding cell bud growth GO:0007117 29 0.048
positive regulation of cellular protein metabolic process GO:0032270 89 0.048
metallo sulfur cluster assembly GO:0031163 22 0.048
lipid biosynthetic process GO:0008610 170 0.047
cellular protein catabolic process GO:0044257 213 0.047
regulation of conjugation GO:0046999 16 0.046
organelle localization GO:0051640 128 0.046
endocytosis GO:0006897 90 0.045
maintenance of protein location in cell GO:0032507 50 0.045
phospholipid metabolic process GO:0006644 125 0.045
maintenance of location GO:0051235 66 0.045
negative regulation of response to stimulus GO:0048585 40 0.045
cell wall organization or biogenesis GO:0071554 190 0.044
pseudohyphal growth GO:0007124 75 0.044
conjugation GO:0000746 107 0.044
mrna processing GO:0006397 185 0.044
intracellular signal transduction GO:0035556 112 0.044
nuclear transcribed mrna catabolic process deadenylation dependent decay GO:0000288 44 0.043
ribonucleoprotein complex assembly GO:0022618 143 0.043
organophosphate metabolic process GO:0019637 597 0.043
sphingolipid biosynthetic process GO:0030148 29 0.043
regulation of response to stimulus GO:0048583 157 0.043
negative regulation of dna metabolic process GO:0051053 36 0.043
regulation of receptor mediated endocytosis GO:0048259 4 0.043
lipid metabolic process GO:0006629 269 0.043
multi organism reproductive process GO:0044703 216 0.042
regulation of metal ion transport GO:0010959 2 0.042
cellular cation homeostasis GO:0030003 100 0.042
carbohydrate derivative metabolic process GO:1901135 549 0.041
regulation of cell growth GO:0001558 29 0.041
regulation of cellular component biogenesis GO:0044087 112 0.041
sexual reproduction GO:0019953 216 0.041
growth GO:0040007 157 0.041
gtp catabolic process GO:0006184 107 0.041
mitochondrial rna metabolic process GO:0000959 24 0.039
positive regulation of catalytic activity GO:0043085 178 0.039
cellular macromolecule catabolic process GO:0044265 363 0.039
single organism membrane organization GO:0044802 275 0.039
negative regulation of gene expression GO:0010629 312 0.039
metal ion homeostasis GO:0055065 79 0.038
maintenance of protein location GO:0045185 53 0.038
maintenance of location in cell GO:0051651 58 0.038
ribonucleotide catabolic process GO:0009261 327 0.038
cellular homeostasis GO:0019725 138 0.038
meiotic cell cycle process GO:1903046 229 0.038
positive regulation of cellular component organization GO:0051130 116 0.038
regulation of cell size GO:0008361 30 0.037
regulation of cellular catabolic process GO:0031329 195 0.036
endosomal transport GO:0016197 86 0.036
single organism signaling GO:0044700 208 0.036
negative regulation of protein metabolic process GO:0051248 85 0.036
aromatic compound catabolic process GO:0019439 491 0.035
negative regulation of transcription from rna polymerase ii promoter by pheromones GO:0046020 10 0.035
negative regulation of transcription dna templated GO:0045892 258 0.035
negative regulation of dna replication GO:0008156 15 0.035
positive regulation of protein modification process GO:0031401 49 0.035
reproduction of a single celled organism GO:0032505 191 0.035
negative regulation of molecular function GO:0044092 68 0.035
regulation of protein localization GO:0032880 62 0.035
nucleobase containing compound catabolic process GO:0034655 479 0.034
positive regulation of phosphorylation GO:0042327 33 0.034
regulation of localization GO:0032879 127 0.033
protein maturation GO:0051604 76 0.033
negative regulation of transferase activity GO:0051348 31 0.033
negative regulation of protein processing GO:0010955 33 0.033
regulation of conjugation with cellular fusion GO:0031137 16 0.032
regulation of protein modification process GO:0031399 110 0.032
regulation of cellular component size GO:0032535 50 0.032
regulation of carbohydrate metabolic process GO:0006109 43 0.032
filamentous growth GO:0030447 124 0.032
positive regulation of hydrolase activity GO:0051345 112 0.031
negative regulation of phosphate metabolic process GO:0045936 49 0.031
response to extracellular stimulus GO:0009991 156 0.031
negative regulation of proteolysis GO:0045861 33 0.031
negative regulation of catalytic activity GO:0043086 60 0.031
cellular response to organic substance GO:0071310 159 0.031
response to osmotic stress GO:0006970 83 0.031
positive regulation of phosphorus metabolic process GO:0010562 147 0.031
carbohydrate metabolic process GO:0005975 252 0.031
purine nucleoside catabolic process GO:0006152 330 0.031
peptidyl amino acid modification GO:0018193 116 0.031
positive regulation of protein metabolic process GO:0051247 93 0.031
nuclear transcribed mrna catabolic process GO:0000956 89 0.030
positive regulation of endocytosis GO:0045807 12 0.030
regulation of growth GO:0040008 50 0.030
iron sulfur cluster assembly GO:0016226 22 0.030
organonitrogen compound catabolic process GO:1901565 404 0.030
trna metabolic process GO:0006399 151 0.029
reproductive process GO:0022414 248 0.029
positive regulation of molecular function GO:0044093 185 0.029
positive regulation of cytoplasmic transport GO:1903651 4 0.029
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.029
sphingolipid metabolic process GO:0006665 41 0.029
regulation of cell communication GO:0010646 124 0.028
response to chemical GO:0042221 390 0.028
protein complex assembly GO:0006461 302 0.028
multi organism process GO:0051704 233 0.028
ribonucleoprotein complex subunit organization GO:0071826 152 0.028
guanosine containing compound catabolic process GO:1901069 109 0.027
mitotic cell cycle process GO:1903047 294 0.027
nucleoside phosphate catabolic process GO:1901292 331 0.027
nitrogen utilization GO:0019740 21 0.027
er associated ubiquitin dependent protein catabolic process GO:0030433 46 0.027
purine nucleoside metabolic process GO:0042278 380 0.027
ribonucleoside catabolic process GO:0042454 332 0.027
regulation of vesicle mediated transport GO:0060627 39 0.027
regulation of cell cycle GO:0051726 195 0.027
protein complex biogenesis GO:0070271 314 0.027
regulation of dna dependent dna replication GO:0090329 37 0.026
mitochondrial translation GO:0032543 52 0.026
response to abiotic stimulus GO:0009628 159 0.026
regulation of glucose metabolic process GO:0010906 27 0.026
positive regulation of cell death GO:0010942 3 0.026
regulation of ion transport GO:0043269 16 0.025
dna dependent dna replication GO:0006261 115 0.025
mitotic cell cycle phase transition GO:0044772 141 0.025
death GO:0016265 30 0.025
cell growth GO:0016049 89 0.025
cellular carbohydrate biosynthetic process GO:0034637 49 0.025
negative regulation of catabolic process GO:0009895 43 0.024
gtp metabolic process GO:0046039 107 0.024
cellular ion homeostasis GO:0006873 112 0.024
endosome transport via multivesicular body sorting pathway GO:0032509 27 0.024
positive regulation of transport GO:0051050 32 0.024
establishment of protein localization GO:0045184 367 0.024
cellular amino acid metabolic process GO:0006520 225 0.024
cell budding GO:0007114 48 0.024
meiotic recombination checkpoint GO:0051598 9 0.024
nucleobase containing small molecule metabolic process GO:0055086 491 0.023
carbohydrate derivative catabolic process GO:1901136 339 0.023
purine containing compound catabolic process GO:0072523 332 0.023
response to organic substance GO:0010033 182 0.023
signal transduction by phosphorylation GO:0023014 31 0.023
regulation of dna replication GO:0006275 51 0.023
protein processing GO:0016485 64 0.023
heterocycle catabolic process GO:0046700 494 0.022
carbohydrate derivative biosynthetic process GO:1901137 181 0.022
regulation of macroautophagy GO:0016241 15 0.022
chromosome segregation GO:0007059 159 0.022
regulation of transporter activity GO:0032409 1 0.022
divalent inorganic cation homeostasis GO:0072507 21 0.022
rrna metabolic process GO:0016072 244 0.022
glycogen metabolic process GO:0005977 30 0.022
cellular protein complex assembly GO:0043623 209 0.022
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.022
regulation of transmembrane transporter activity GO:0022898 1 0.022
filamentous growth of a population of unicellular organisms GO:0044182 109 0.022
regulation of purine nucleotide metabolic process GO:1900542 109 0.022
positive regulation of programmed cell death GO:0043068 3 0.021
negative regulation of mitotic cell cycle phase transition GO:1901991 57 0.021
signaling GO:0023052 208 0.021
carbohydrate biosynthetic process GO:0016051 82 0.021
regulation of signaling GO:0023051 119 0.021
organic cyclic compound catabolic process GO:1901361 499 0.021
regulation of nuclear division GO:0051783 103 0.021
regulation of cellular carbohydrate metabolic process GO:0010675 41 0.021
purine nucleotide catabolic process GO:0006195 328 0.020
posttranscriptional regulation of gene expression GO:0010608 115 0.020
protein polymerization GO:0051258 51 0.020
nucleotide catabolic process GO:0009166 330 0.020
positive regulation of nucleotide catabolic process GO:0030813 97 0.020
ribonucleoside triphosphate catabolic process GO:0009203 327 0.019
regulation of translation GO:0006417 89 0.019
positive regulation of purine nucleotide metabolic process GO:1900544 100 0.019
spindle checkpoint GO:0031577 35 0.019
apoptotic process GO:0006915 30 0.019
polyamine transport GO:0015846 13 0.019
disaccharide metabolic process GO:0005984 25 0.019
regulation of filamentous growth GO:0010570 38 0.019
negative regulation of cellular component organization GO:0051129 109 0.019
purine nucleoside triphosphate catabolic process GO:0009146 329 0.019
cellular divalent inorganic cation homeostasis GO:0072503 21 0.019
regulation of protein processing GO:0070613 34 0.019
meiotic cell cycle checkpoint GO:0033313 10 0.018
negative regulation of mitosis GO:0045839 39 0.018
positive regulation of intracellular transport GO:0032388 4 0.018
regulation of pseudohyphal growth GO:2000220 18 0.018
glycosyl compound metabolic process GO:1901657 398 0.018
programmed cell death GO:0012501 30 0.018
negative regulation of proteasomal ubiquitin dependent protein catabolic process GO:0032435 24 0.018
negative regulation of chromosome segregation GO:0051985 25 0.018
lipoprotein metabolic process GO:0042157 40 0.018
reproductive process in single celled organism GO:0022413 145 0.018
replication fork protection GO:0048478 6 0.018
regulation of purine nucleotide catabolic process GO:0033121 106 0.018
nucleoside triphosphate metabolic process GO:0009141 364 0.018
positive regulation of ion transport GO:0043270 5 0.017
cellular component disassembly GO:0022411 86 0.017
meiotic cell cycle GO:0051321 272 0.017
glucose metabolic process GO:0006006 65 0.017
organophosphate catabolic process GO:0046434 338 0.017
positive regulation of apoptotic process GO:0043065 3 0.017
ubiquitin dependent protein catabolic process GO:0006511 181 0.017
sister chromatid segregation GO:0000819 93 0.017
nucleoside catabolic process GO:0009164 335 0.017
cellular metal ion homeostasis GO:0006875 78 0.017
ascospore wall assembly GO:0030476 52 0.017
regulation of protein serine threonine kinase activity GO:0071900 41 0.017
phospholipid biosynthetic process GO:0008654 89 0.016
peptide metabolic process GO:0006518 28 0.016
regulation of protein maturation GO:1903317 34 0.016
sporulation resulting in formation of a cellular spore GO:0030435 129 0.016
negative regulation of dna dependent dna replication GO:2000104 8 0.016
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.016
autophagy GO:0006914 106 0.016
regulation of organelle organization GO:0033043 243 0.016
regulation of nucleotide catabolic process GO:0030811 106 0.016
regulation of iron sulfur cluster assembly GO:1903329 1 0.016
negative regulation of protein maturation GO:1903318 33 0.016
negative regulation of rna biosynthetic process GO:1902679 260 0.016
regulation of nucleotide metabolic process GO:0006140 110 0.015
conjugation with cellular fusion GO:0000747 106 0.015
cellular transition metal ion homeostasis GO:0046916 59 0.015
indole containing compound metabolic process GO:0042430 9 0.015
positive regulation of nucleotide metabolic process GO:0045981 101 0.015
trehalose metabolic process GO:0005991 11 0.015
amine metabolic process GO:0009308 51 0.015
cytokinesis site selection GO:0007105 40 0.015
cellular respiration GO:0045333 82 0.015
cell cycle phase transition GO:0044770 144 0.015
regulation of filamentous growth of a population of unicellular organisms GO:1900428 36 0.015
amino acid activation GO:0043038 35 0.015
polysaccharide metabolic process GO:0005976 60 0.015
cellular response to extracellular stimulus GO:0031668 150 0.015
single organism reproductive process GO:0044702 159 0.014
late endosome to vacuole transport GO:0045324 42 0.014
tor signaling GO:0031929 17 0.014
cellular response to nutrient GO:0031670 50 0.014
regulation of sister chromatid segregation GO:0033045 30 0.014
cell wall assembly GO:0070726 54 0.014
nitrogen compound transport GO:0071705 212 0.014
rrna processing GO:0006364 227 0.014
cellular amine metabolic process GO:0044106 51 0.014
protein localization to organelle GO:0033365 337 0.014
meiotic nuclear division GO:0007126 163 0.014
protein localization to membrane GO:0072657 102 0.014
g1 s transition of mitotic cell cycle GO:0000082 64 0.014
cell death GO:0008219 30 0.014
inorganic ion transmembrane transport GO:0098660 109 0.014
purine containing compound metabolic process GO:0072521 400 0.014
organophosphate biosynthetic process GO:0090407 182 0.014
regulation of cellular amino acid metabolic process GO:0006521 16 0.013
fungal type cell wall assembly GO:0071940 53 0.013
regulation of gtpase activity GO:0043087 84 0.013
purine ribonucleoside metabolic process GO:0046128 380 0.013
modification dependent protein catabolic process GO:0019941 181 0.013
regulation of cell cycle process GO:0010564 150 0.013
regulation of nucleoside metabolic process GO:0009118 106 0.013
response to pheromone GO:0019236 92 0.013
carbohydrate transport GO:0008643 33 0.013
cofactor biosynthetic process GO:0051188 80 0.013
hexose catabolic process GO:0019320 24 0.013
mitotic cell cycle checkpoint GO:0007093 56 0.013
regulation of protein export from nucleus GO:0046825 3 0.013
proteasomal protein catabolic process GO:0010498 141 0.013
cell division GO:0051301 205 0.013
negative regulation of protein modification process GO:0031400 37 0.013
cellular response to endogenous stimulus GO:0071495 22 0.013
negative regulation of cellular protein catabolic process GO:1903363 27 0.013
purine ribonucleotide catabolic process GO:0009154 327 0.012
dna recombination GO:0006310 172 0.012
mitotic cell cycle GO:0000278 306 0.012
monosaccharide catabolic process GO:0046365 28 0.012
dna repair GO:0006281 236 0.012
ion transport GO:0006811 274 0.012
late endosome to vacuole transport via multivesicular body sorting pathway GO:0032511 26 0.012
negative regulation of mitotic sister chromatid separation GO:2000816 23 0.012
regulation of mitotic metaphase anaphase transition GO:0030071 27 0.012
regulation of cell cycle phase transition GO:1901987 70 0.012
regulation of dna metabolic process GO:0051052 100 0.012
positive regulation of purine nucleotide catabolic process GO:0033123 97 0.012
purine nucleotide metabolic process GO:0006163 376 0.012
response to topologically incorrect protein GO:0035966 38 0.012
ncrna processing GO:0034470 330 0.012
positive regulation of nucleoside metabolic process GO:0045979 97 0.012
disaccharide biosynthetic process GO:0046351 7 0.012
macromolecular complex disassembly GO:0032984 80 0.012
negative regulation of intracellular signal transduction GO:1902532 27 0.012
negative regulation of cell cycle GO:0045786 91 0.012
regulation of mitosis GO:0007088 65 0.012
nucleotide metabolic process GO:0009117 453 0.012
regulation of meiotic cell cycle GO:0051445 43 0.011
negative regulation of mitotic cell cycle GO:0045930 63 0.011
purine ribonucleoside catabolic process GO:0046130 330 0.011
monosaccharide metabolic process GO:0005996 83 0.011
response to starvation GO:0042594 96 0.011
asexual reproduction GO:0019954 48 0.011
retrograde transport endosome to golgi GO:0042147 33 0.011
mitotic spindle checkpoint GO:0071174 34 0.011
regulation of mitotic cell cycle phase transition GO:1901990 68 0.011
divalent inorganic cation transport GO:0072511 26 0.011
regulation of growth of unicellular organism as a thread of attached cells GO:0070784 31 0.011
chromosome separation GO:0051304 33 0.011
negative regulation of proteasomal protein catabolic process GO:1901799 25 0.011
cell surface receptor signaling pathway GO:0007166 38 0.011
rna 3 end processing GO:0031123 88 0.011
actin filament organization GO:0007015 56 0.011
single organism developmental process GO:0044767 258 0.011
cellular amino acid catabolic process GO:0009063 48 0.011
cellular response to topologically incorrect protein GO:0035967 32 0.011
reciprocal dna recombination GO:0035825 54 0.011
cellular protein complex disassembly GO:0043624 42 0.011
gene silencing by rna GO:0031047 3 0.011
hexose metabolic process GO:0019318 78 0.011
sporulation GO:0043934 132 0.011
small gtpase mediated signal transduction GO:0007264 36 0.010
cellular response to nutrient levels GO:0031669 144 0.010
microtubule polymerization GO:0046785 30 0.010
protein export from nucleus GO:0006611 17 0.010
positive regulation of sequence specific dna binding transcription factor activity GO:0051091 2 0.010
regulation of cell division GO:0051302 113 0.010
positive regulation of intracellular protein transport GO:0090316 3 0.010
dna templated transcription termination GO:0006353 42 0.010
microautophagy GO:0016237 43 0.010
ras protein signal transduction GO:0007265 29 0.010

PAM1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org