Saccharomyces cerevisiae

41 known processes

RIF2 (YLR453C)

Rif2p

RIF2 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
protein localization to organelle GO:0033365 337 0.164
regulation of biological quality GO:0065008 391 0.143
cellular response to chemical stimulus GO:0070887 315 0.126
macromolecule catabolic process GO:0009057 383 0.105
cellular macromolecule catabolic process GO:0044265 363 0.104
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.094
cellular carbohydrate catabolic process GO:0044275 33 0.091
negative regulation of transcription dna templated GO:0045892 258 0.091
cellular response to dna damage stimulus GO:0006974 287 0.089
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.085
negative regulation of biosynthetic process GO:0009890 312 0.083
chromatin organization GO:0006325 242 0.080
dna repair GO:0006281 236 0.078
organic acid metabolic process GO:0006082 352 0.076
negative regulation of nucleic acid templated transcription GO:1903507 260 0.075
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.075
negative regulation of gene expression GO:0010629 312 0.073
response to chemical GO:0042221 390 0.070
cellular nitrogen compound catabolic process GO:0044270 494 0.065
positive regulation of rna biosynthetic process GO:1902680 286 0.064
ion transport GO:0006811 274 0.061
negative regulation of macromolecule metabolic process GO:0010605 375 0.061
telomere maintenance GO:0000723 74 0.060
heterocycle catabolic process GO:0046700 494 0.060
nucleobase containing compound catabolic process GO:0034655 479 0.059
single organism cellular localization GO:1902580 375 0.059
establishment of protein localization GO:0045184 367 0.058
aromatic compound catabolic process GO:0019439 491 0.058
protein complex biogenesis GO:0070271 314 0.055
carbohydrate derivative metabolic process GO:1901135 549 0.054
positive regulation of macromolecule metabolic process GO:0010604 394 0.053
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.053
transmembrane transport GO:0055085 349 0.053
positive regulation of biosynthetic process GO:0009891 336 0.052
negative regulation of cellular metabolic process GO:0031324 407 0.051
purine containing compound metabolic process GO:0072521 400 0.050
protein transport GO:0015031 345 0.050
negative regulation of macromolecule biosynthetic process GO:0010558 291 0.050
positive regulation of gene expression GO:0010628 321 0.050
telomere organization GO:0032200 75 0.050
multi organism reproductive process GO:0044703 216 0.049
positive regulation of rna metabolic process GO:0051254 294 0.049
glycosyl compound metabolic process GO:1901657 398 0.049
organic anion transport GO:0015711 114 0.048
anatomical structure homeostasis GO:0060249 74 0.047
oxoacid metabolic process GO:0043436 351 0.047
negative regulation of cellular biosynthetic process GO:0031327 312 0.047
positive regulation of transcription dna templated GO:0045893 286 0.046
cell communication GO:0007154 345 0.046
organonitrogen compound catabolic process GO:1901565 404 0.045
single organism catabolic process GO:0044712 619 0.045
ribonucleoside metabolic process GO:0009119 389 0.044
negative regulation of nucleobase containing compound metabolic process GO:0045934 295 0.043
ribose phosphate metabolic process GO:0019693 384 0.043
negative regulation of rna metabolic process GO:0051253 262 0.043
reproductive process GO:0022414 248 0.042
organophosphate metabolic process GO:0019637 597 0.042
mrna metabolic process GO:0016071 269 0.042
nucleobase containing small molecule metabolic process GO:0055086 491 0.041
nucleoside phosphate metabolic process GO:0006753 458 0.040
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.040
chromatin modification GO:0016568 200 0.040
nucleotide metabolic process GO:0009117 453 0.040
ribonucleotide metabolic process GO:0009259 377 0.040
single organism carbohydrate catabolic process GO:0044724 73 0.039
homeostatic process GO:0042592 227 0.039
negative regulation of rna biosynthetic process GO:1902679 260 0.039
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.039
cellular response to nutrient GO:0031670 50 0.039
double strand break repair GO:0006302 105 0.039
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.038
establishment of protein localization to organelle GO:0072594 278 0.038
positive regulation of cellular biosynthetic process GO:0031328 336 0.037
telomere capping GO:0016233 10 0.036
cellular response to organic substance GO:0071310 159 0.036
pyruvate metabolic process GO:0006090 37 0.036
response to organic substance GO:0010033 182 0.036
maintenance of location GO:0051235 66 0.036
ribonucleoside catabolic process GO:0042454 332 0.036
intracellular protein transport GO:0006886 319 0.036
ribonucleotide catabolic process GO:0009261 327 0.036
ribosome biogenesis GO:0042254 335 0.035
response to nutrient GO:0007584 52 0.035
regulation of cellular component organization GO:0051128 334 0.035
regulation of cell cycle GO:0051726 195 0.035
positive regulation of nucleic acid templated transcription GO:1903508 286 0.034
positive regulation of transcription from rna polymerase ii promoter GO:0045944 252 0.033
generation of precursor metabolites and energy GO:0006091 147 0.033
purine nucleoside metabolic process GO:0042278 380 0.033
rrna processing GO:0006364 227 0.033
carbon catabolite regulation of transcription GO:0045990 39 0.033
organic cyclic compound catabolic process GO:1901361 499 0.032
nucleotide catabolic process GO:0009166 330 0.031
developmental process GO:0032502 261 0.031
negative regulation of transcription from rna polymerase ii promoter GO:0000122 137 0.031
purine nucleotide metabolic process GO:0006163 376 0.031
telomere maintenance via telomere lengthening GO:0010833 22 0.031
nucleoside metabolic process GO:0009116 394 0.031
purine ribonucleotide metabolic process GO:0009150 372 0.030
regulation of protein complex assembly GO:0043254 77 0.030
purine ribonucleotide catabolic process GO:0009154 327 0.030
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.030
protein targeting GO:0006605 272 0.030
cellular response to extracellular stimulus GO:0031668 150 0.030
nucleoside triphosphate metabolic process GO:0009141 364 0.030
nucleoside monophosphate metabolic process GO:0009123 267 0.029
purine ribonucleoside metabolic process GO:0046128 380 0.029
purine nucleotide catabolic process GO:0006195 328 0.029
translation GO:0006412 230 0.029
cation transport GO:0006812 166 0.029
protein complex assembly GO:0006461 302 0.029
regulation of gene expression epigenetic GO:0040029 147 0.028
developmental process involved in reproduction GO:0003006 159 0.028
ribonucleoside triphosphate metabolic process GO:0009199 356 0.028
sexual reproduction GO:0019953 216 0.028
nucleoside catabolic process GO:0009164 335 0.027
negative regulation of gene expression epigenetic GO:0045814 147 0.027
chromatin silencing GO:0006342 147 0.027
regulation of nuclear division GO:0051783 103 0.027
regulation of phosphate metabolic process GO:0019220 230 0.026
nucleoside phosphate catabolic process GO:1901292 331 0.026
regulation of cellular catabolic process GO:0031329 195 0.026
dna recombination GO:0006310 172 0.026
organophosphate catabolic process GO:0046434 338 0.026
chromatin silencing at silent mating type cassette GO:0030466 53 0.026
carboxylic acid metabolic process GO:0019752 338 0.026
purine nucleoside triphosphate metabolic process GO:0009144 356 0.025
protein localization to membrane GO:0072657 102 0.025
ncrna processing GO:0034470 330 0.025
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.025
response to extracellular stimulus GO:0009991 156 0.025
single organism membrane organization GO:0044802 275 0.024
ribonucleoside monophosphate metabolic process GO:0009161 265 0.024
mitochondrion organization GO:0007005 261 0.024
nucleobase containing compound transport GO:0015931 124 0.024
positive regulation of cellular component biogenesis GO:0044089 45 0.024
cellular protein catabolic process GO:0044257 213 0.023
carbohydrate derivative catabolic process GO:1901136 339 0.023
protein dna complex assembly GO:0065004 105 0.023
purine nucleoside catabolic process GO:0006152 330 0.023
organophosphate ester transport GO:0015748 45 0.023
signaling GO:0023052 208 0.022
nitrogen compound transport GO:0071705 212 0.022
glycosyl compound catabolic process GO:1901658 335 0.022
purine ribonucleoside catabolic process GO:0046130 330 0.022
maintenance of protein location in cell GO:0032507 50 0.022
organelle fission GO:0048285 272 0.021
phosphorylation GO:0016310 291 0.021
signal transduction GO:0007165 208 0.021
mitotic recombination GO:0006312 55 0.021
cellular carbohydrate metabolic process GO:0044262 135 0.021
regulation of organelle organization GO:0033043 243 0.021
membrane organization GO:0061024 276 0.021
response to organic cyclic compound GO:0014070 1 0.021
atp metabolic process GO:0046034 251 0.021
regulation of catalytic activity GO:0050790 307 0.021
meiotic cell cycle GO:0051321 272 0.021
nucleoside triphosphate catabolic process GO:0009143 329 0.021
dna templated transcriptional preinitiation complex assembly GO:0070897 51 0.021
ribonucleoside triphosphate catabolic process GO:0009203 327 0.020
cellular response to nutrient levels GO:0031669 144 0.020
phospholipid metabolic process GO:0006644 125 0.020
carbohydrate metabolic process GO:0005975 252 0.020
organelle localization GO:0051640 128 0.020
regulation of signal transduction GO:0009966 114 0.020
metal ion transport GO:0030001 75 0.020
establishment of protein localization to membrane GO:0090150 99 0.020
response to external stimulus GO:0009605 158 0.020
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.020
purine ribonucleoside monophosphate catabolic process GO:0009169 224 0.019
chromatin assembly or disassembly GO:0006333 60 0.019
regulation of generation of precursor metabolites and energy GO:0043467 23 0.019
purine nucleoside triphosphate catabolic process GO:0009146 329 0.019
sporulation GO:0043934 132 0.019
carbon catabolite regulation of transcription from rna polymerase ii promoter GO:0000429 34 0.019
purine nucleoside monophosphate metabolic process GO:0009126 262 0.019
regulation of molecular function GO:0065009 320 0.019
reproductive process in single celled organism GO:0022413 145 0.019
lipid metabolic process GO:0006629 269 0.019
transcription initiation from rna polymerase ii promoter GO:0006367 55 0.019
protein localization to chromosome GO:0034502 28 0.019
amine metabolic process GO:0009308 51 0.018
maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000462 96 0.018
gene silencing GO:0016458 151 0.018
protein catabolic process GO:0030163 221 0.018
ribonucleoside monophosphate catabolic process GO:0009158 224 0.018
mitochondrial translation GO:0032543 52 0.018
cell division GO:0051301 205 0.018
external encapsulating structure organization GO:0045229 146 0.018
cytoskeleton organization GO:0007010 230 0.017
dna conformation change GO:0071103 98 0.017
purine nucleoside monophosphate catabolic process GO:0009128 224 0.017
methylation GO:0032259 101 0.017
dna templated transcription initiation GO:0006352 71 0.017
organic acid transport GO:0015849 77 0.017
purine containing compound catabolic process GO:0072523 332 0.017
rna transport GO:0050658 92 0.017
cell differentiation GO:0030154 161 0.017
multi organism process GO:0051704 233 0.017
detection of hexose stimulus GO:0009732 3 0.017
anion transport GO:0006820 145 0.017
rna polymerase ii transcriptional preinitiation complex assembly GO:0051123 40 0.017
atp catabolic process GO:0006200 224 0.017
single organism developmental process GO:0044767 258 0.017
mrna processing GO:0006397 185 0.017
alcohol metabolic process GO:0006066 112 0.017
rna export from nucleus GO:0006405 88 0.017
rna catabolic process GO:0006401 118 0.017
organic hydroxy compound metabolic process GO:1901615 125 0.017
nucleoside monophosphate catabolic process GO:0009125 224 0.017
nuclear transcribed mrna catabolic process GO:0000956 89 0.016
ribosomal small subunit biogenesis GO:0042274 124 0.016
negative regulation of cell cycle process GO:0010948 86 0.016
cellular lipid metabolic process GO:0044255 229 0.016
regulation of phosphorus metabolic process GO:0051174 230 0.016
maintenance of protein location GO:0045185 53 0.016
conjugation with cellular fusion GO:0000747 106 0.016
regulation of localization GO:0032879 127 0.016
regulation of metal ion transport GO:0010959 2 0.016
anatomical structure development GO:0048856 160 0.016
cellular amine metabolic process GO:0044106 51 0.016
modification dependent protein catabolic process GO:0019941 181 0.016
cellular developmental process GO:0048869 191 0.016
positive regulation of molecular function GO:0044093 185 0.016
single organism signaling GO:0044700 208 0.016
maturation of ssu rrna GO:0030490 105 0.015
rna phosphodiester bond hydrolysis endonucleolytic GO:0090502 79 0.015
divalent inorganic cation transport GO:0072511 26 0.015
cell wall organization GO:0071555 146 0.015
anion transmembrane transport GO:0098656 79 0.015
carbohydrate catabolic process GO:0016052 77 0.015
regulation of catabolic process GO:0009894 199 0.015
regulation of purine nucleotide catabolic process GO:0033121 106 0.015
cell wall organization or biogenesis GO:0071554 190 0.015
mrna export from nucleus GO:0006406 60 0.015
cellular chemical homeostasis GO:0055082 123 0.015
disaccharide metabolic process GO:0005984 25 0.015
conjugation GO:0000746 107 0.015
organelle assembly GO:0070925 118 0.015
monocarboxylic acid metabolic process GO:0032787 122 0.015
response to nutrient levels GO:0031667 150 0.015
positive regulation of phosphorus metabolic process GO:0010562 147 0.014
macromolecule methylation GO:0043414 85 0.014
reproduction of a single celled organism GO:0032505 191 0.014
negative regulation of cellular component organization GO:0051129 109 0.014
regulation of nucleotide metabolic process GO:0006140 110 0.014
rna splicing GO:0008380 131 0.014
rrna metabolic process GO:0016072 244 0.014
establishment of rna localization GO:0051236 92 0.014
organophosphate biosynthetic process GO:0090407 182 0.014
rna phosphodiester bond hydrolysis GO:0090501 112 0.014
endomembrane system organization GO:0010256 74 0.014
ribonucleoprotein complex subunit organization GO:0071826 152 0.014
organelle inheritance GO:0048308 51 0.014
chromatin remodeling GO:0006338 80 0.014
regulation of purine nucleotide metabolic process GO:1900542 109 0.014
regulation of nucleoside metabolic process GO:0009118 106 0.014
single organism reproductive process GO:0044702 159 0.014
nucleocytoplasmic transport GO:0006913 163 0.014
cellular response to external stimulus GO:0071496 150 0.014
rna dependent dna replication GO:0006278 25 0.014
positive regulation of catalytic activity GO:0043085 178 0.014
cellular response to oxidative stress GO:0034599 94 0.014
positive regulation of cellular component organization GO:0051130 116 0.014
cell development GO:0048468 107 0.014
sexual sporulation GO:0034293 113 0.013
small molecule catabolic process GO:0044282 88 0.013
maintenance of location in cell GO:0051651 58 0.013
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 109 0.013
vesicle mediated transport GO:0016192 335 0.013
trna metabolic process GO:0006399 151 0.013
regulation of nucleotide catabolic process GO:0030811 106 0.013
ras protein signal transduction GO:0007265 29 0.013
ion transmembrane transport GO:0034220 200 0.013
dna replication GO:0006260 147 0.013
cellular component disassembly GO:0022411 86 0.013
fungal type cell wall organization or biogenesis GO:0071852 169 0.013
sporulation resulting in formation of a cellular spore GO:0030435 129 0.013
alpha amino acid metabolic process GO:1901605 124 0.013
modification dependent macromolecule catabolic process GO:0043632 203 0.013
negative regulation of organelle organization GO:0010639 103 0.013
macromolecular complex disassembly GO:0032984 80 0.013
protein localization to nucleus GO:0034504 74 0.013
rna modification GO:0009451 99 0.013
response to hypoxia GO:0001666 4 0.013
positive regulation of secretion by cell GO:1903532 2 0.013
cell cycle phase transition GO:0044770 144 0.013
aerobic respiration GO:0009060 55 0.013
non recombinational repair GO:0000726 33 0.013
chemical homeostasis GO:0048878 137 0.013
response to pheromone involved in conjugation with cellular fusion GO:0000749 74 0.013
amino acid transport GO:0006865 45 0.012
negative regulation of cell cycle GO:0045786 91 0.012
lipid localization GO:0010876 60 0.012
cellular amino acid biosynthetic process GO:0008652 118 0.012
protein phosphorylation GO:0006468 197 0.012
carbohydrate derivative transport GO:1901264 27 0.012
negative regulation of gene silencing GO:0060969 27 0.012
small gtpase mediated signal transduction GO:0007264 36 0.012
pyrimidine containing compound biosynthetic process GO:0072528 33 0.012
regulation of hydrolase activity GO:0051336 133 0.012
organonitrogen compound biosynthetic process GO:1901566 314 0.012
cellular amino acid catabolic process GO:0009063 48 0.012
telomere maintenance via telomerase GO:0007004 21 0.012
carbohydrate derivative biosynthetic process GO:1901137 181 0.012
meiotic nuclear division GO:0007126 163 0.012
single organism carbohydrate metabolic process GO:0044723 237 0.012
positive regulation of purine nucleotide metabolic process GO:1900544 100 0.012
response to oxidative stress GO:0006979 99 0.012
coenzyme biosynthetic process GO:0009108 66 0.012
protein import GO:0017038 122 0.011
maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000466 80 0.011
regulation of translation GO:0006417 89 0.011
carboxylic acid transport GO:0046942 74 0.011
positive regulation of purine nucleotide catabolic process GO:0033123 97 0.011
aging GO:0007568 71 0.011
cellular response to endogenous stimulus GO:0071495 22 0.011
positive regulation of nucleotide metabolic process GO:0045981 101 0.011
multi organism cellular process GO:0044764 120 0.011
phospholipid biosynthetic process GO:0008654 89 0.011
rna localization GO:0006403 112 0.011
protein dna complex subunit organization GO:0071824 153 0.011
nuclear transport GO:0051169 165 0.011
regulation of signaling GO:0023051 119 0.011
regulation of cellular ketone metabolic process GO:0010565 42 0.011
double strand break repair via nonhomologous end joining GO:0006303 27 0.011
establishment of organelle localization GO:0051656 96 0.011
positive regulation of catabolic process GO:0009896 135 0.011
regulation of transcription by glucose GO:0046015 13 0.011
cellular respiration GO:0045333 82 0.011
proteolysis involved in cellular protein catabolic process GO:0051603 198 0.011
proteasomal protein catabolic process GO:0010498 141 0.011
nuclear export GO:0051168 124 0.011
regulation of fatty acid oxidation GO:0046320 3 0.011
pseudouridine synthesis GO:0001522 13 0.011
regulation of chromosome organization GO:0033044 66 0.011
dna templated transcription termination GO:0006353 42 0.011
invasive growth in response to glucose limitation GO:0001403 61 0.011
maturation of 5 8s rrna GO:0000460 80 0.011
microtubule organizing center organization GO:0031023 33 0.011
histone modification GO:0016570 119 0.011
positive regulation of cell death GO:0010942 3 0.011
nucleic acid transport GO:0050657 94 0.010
regulation of response to drug GO:2001023 3 0.010
guanosine containing compound metabolic process GO:1901068 111 0.010
positive regulation of programmed cell death GO:0043068 3 0.010
cleavage involved in rrna processing GO:0000469 69 0.010
regulation of cellular amino acid metabolic process GO:0006521 16 0.010
oxidation reduction process GO:0055114 353 0.010
energy derivation by oxidation of organic compounds GO:0015980 125 0.010
positive regulation of secretion GO:0051047 2 0.010
intracellular signal transduction GO:0035556 112 0.010
fungal type cell wall organization GO:0031505 145 0.010
inorganic ion transmembrane transport GO:0098660 109 0.010
detection of stimulus GO:0051606 4 0.010
cellular protein complex disassembly GO:0043624 42 0.010
ribosomal large subunit biogenesis GO:0042273 98 0.010
cellular amino acid metabolic process GO:0006520 225 0.010
cofactor metabolic process GO:0051186 126 0.010
ribonucleoprotein complex assembly GO:0022618 143 0.010
proteolysis GO:0006508 268 0.010
regulation of protein metabolic process GO:0051246 237 0.010

RIF2 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.020
nervous system disease DOID:863 0 0.010