|
regulation of transcription from rna polymerase ii promoter
|
GO:0006357 |
394 |
0.813
|
|
|
dna repair
|
GO:0006281 |
236 |
0.686
|
|
|
protein phosphorylation
|
GO:0006468 |
197 |
0.548
|
|
|
phosphorylation of rna polymerase ii c terminal domain
|
GO:0070816 |
20 |
0.439
|
|
|
cellular response to dna damage stimulus
|
GO:0006974 |
287 |
0.412
|
|
|
phosphorylation
|
GO:0016310 |
291 |
0.400
|
|
|
nucleotide excision repair
|
GO:0006289 |
50 |
0.288
|
|
|
positive regulation of transcription from rna polymerase ii promoter
|
GO:0045944 |
252 |
0.212
|
|
|
ribonucleoside monophosphate metabolic process
|
GO:0009161 |
265 |
0.161
|
Human |
|
organophosphate metabolic process
|
GO:0019637 |
597 |
0.160
|
Human |
|
positive regulation of nucleic acid templated transcription
|
GO:1903508 |
286 |
0.157
|
|
|
nucleoside phosphate metabolic process
|
GO:0006753 |
458 |
0.138
|
Human |
|
atp metabolic process
|
GO:0046034 |
251 |
0.135
|
Human |
|
purine nucleoside monophosphate metabolic process
|
GO:0009126 |
262 |
0.130
|
Human |
|
ribonucleotide metabolic process
|
GO:0009259 |
377 |
0.130
|
Human |
|
single organism catabolic process
|
GO:0044712 |
619 |
0.117
|
Human |
|
positive regulation of rna metabolic process
|
GO:0051254 |
294 |
0.113
|
|
|
positive regulation of gene expression
|
GO:0010628 |
321 |
0.102
|
|
|
nucleoside phosphate catabolic process
|
GO:1901292 |
331 |
0.101
|
Human |
|
cellular nitrogen compound catabolic process
|
GO:0044270 |
494 |
0.100
|
Human |
|
nucleotide metabolic process
|
GO:0009117 |
453 |
0.098
|
Human |
|
mitotic cell cycle process
|
GO:1903047 |
294 |
0.090
|
|
|
positive regulation of macromolecule biosynthetic process
|
GO:0010557 |
325 |
0.086
|
|
|
purine ribonucleoside metabolic process
|
GO:0046128 |
380 |
0.085
|
Human |
|
ribose phosphate metabolic process
|
GO:0019693 |
384 |
0.084
|
Human |
|
organophosphate catabolic process
|
GO:0046434 |
338 |
0.083
|
Human |
|
nucleoside monophosphate metabolic process
|
GO:0009123 |
267 |
0.083
|
Human |
|
purine ribonucleoside monophosphate metabolic process
|
GO:0009167 |
262 |
0.082
|
Human |
|
positive regulation of rna biosynthetic process
|
GO:1902680 |
286 |
0.081
|
|
|
aromatic compound catabolic process
|
GO:0019439 |
491 |
0.080
|
Human |
|
purine ribonucleoside triphosphate metabolic process
|
GO:0009205 |
354 |
0.080
|
Human |
|
ribonucleoside triphosphate catabolic process
|
GO:0009203 |
327 |
0.078
|
Human |
|
nucleobase containing compound catabolic process
|
GO:0034655 |
479 |
0.078
|
Human |
|
positive regulation of biosynthetic process
|
GO:0009891 |
336 |
0.077
|
|
|
negative regulation of gene expression
|
GO:0010629 |
312 |
0.076
|
|
|
purine ribonucleoside monophosphate catabolic process
|
GO:0009169 |
224 |
0.074
|
Human |
|
nucleotide catabolic process
|
GO:0009166 |
330 |
0.073
|
Human |
|
nitrogen compound transport
|
GO:0071705 |
212 |
0.072
|
|
|
positive regulation of cellular biosynthetic process
|
GO:0031328 |
336 |
0.072
|
|
|
carbohydrate derivative metabolic process
|
GO:1901135 |
549 |
0.069
|
Human |
|
heterocycle catabolic process
|
GO:0046700 |
494 |
0.064
|
Human |
|
nucleoside triphosphate metabolic process
|
GO:0009141 |
364 |
0.063
|
Human |
|
nucleobase containing small molecule metabolic process
|
GO:0055086 |
491 |
0.062
|
Human |
|
mitotic cell cycle phase transition
|
GO:0044772 |
141 |
0.062
|
|
|
purine ribonucleotide catabolic process
|
GO:0009154 |
327 |
0.062
|
Human |
|
carbohydrate metabolic process
|
GO:0005975 |
252 |
0.058
|
|
|
purine ribonucleotide metabolic process
|
GO:0009150 |
372 |
0.058
|
Human |
|
purine containing compound catabolic process
|
GO:0072523 |
332 |
0.057
|
Human |
|
mitotic cell cycle
|
GO:0000278 |
306 |
0.056
|
|
|
purine nucleoside triphosphate metabolic process
|
GO:0009144 |
356 |
0.056
|
Human |
|
modification dependent macromolecule catabolic process
|
GO:0043632 |
203 |
0.055
|
|
|
translation
|
GO:0006412 |
230 |
0.055
|
|
|
positive regulation of transcription dna templated
|
GO:0045893 |
286 |
0.054
|
|
|
purine ribonucleoside triphosphate catabolic process
|
GO:0009207 |
327 |
0.054
|
Human |
|
nucleoside metabolic process
|
GO:0009116 |
394 |
0.053
|
Human |
|
purine nucleotide catabolic process
|
GO:0006195 |
328 |
0.053
|
Human |
|
regulation of protein metabolic process
|
GO:0051246 |
237 |
0.052
|
|
|
cell cycle phase transition
|
GO:0044770 |
144 |
0.052
|
|
|
purine nucleotide metabolic process
|
GO:0006163 |
376 |
0.052
|
Human |
|
negative regulation of nucleic acid templated transcription
|
GO:1903507 |
260 |
0.052
|
|
|
positive regulation of macromolecule metabolic process
|
GO:0010604 |
394 |
0.051
|
|
|
positive regulation of nucleobase containing compound metabolic process
|
GO:0045935 |
409 |
0.050
|
|
|
growth of unicellular organism as a thread of attached cells
|
GO:0070783 |
105 |
0.050
|
|
|
methylation
|
GO:0032259 |
101 |
0.049
|
|
|
purine nucleoside catabolic process
|
GO:0006152 |
330 |
0.047
|
Human |
|
mitochondrion organization
|
GO:0007005 |
261 |
0.047
|
|
|
organic cyclic compound catabolic process
|
GO:1901361 |
499 |
0.046
|
Human |
|
rna 3 end processing
|
GO:0031123 |
88 |
0.044
|
|
|
cellular macromolecule catabolic process
|
GO:0044265 |
363 |
0.044
|
|
|
chromatin silencing
|
GO:0006342 |
147 |
0.044
|
|
|
negative regulation of transcription dna templated
|
GO:0045892 |
258 |
0.044
|
|
|
purine containing compound metabolic process
|
GO:0072521 |
400 |
0.043
|
Human |
|
mrna metabolic process
|
GO:0016071 |
269 |
0.042
|
|
|
ribonucleoside monophosphate catabolic process
|
GO:0009158 |
224 |
0.041
|
Human |
|
negative regulation of macromolecule biosynthetic process
|
GO:0010558 |
291 |
0.041
|
|
|
multi organism reproductive process
|
GO:0044703 |
216 |
0.041
|
|
|
protein modification by small protein conjugation or removal
|
GO:0070647 |
172 |
0.041
|
|
|
developmental process
|
GO:0032502 |
261 |
0.040
|
|
|
nucleobase containing compound transport
|
GO:0015931 |
124 |
0.040
|
|
|
atp catabolic process
|
GO:0006200 |
224 |
0.039
|
Human |
|
regulation of cellular protein metabolic process
|
GO:0032268 |
232 |
0.039
|
|
|
carbohydrate derivative biosynthetic process
|
GO:1901137 |
181 |
0.039
|
|
|
ribonucleoside catabolic process
|
GO:0042454 |
332 |
0.038
|
Human |
|
ribonucleoside metabolic process
|
GO:0009119 |
389 |
0.038
|
Human |
|
carbohydrate derivative catabolic process
|
GO:1901136 |
339 |
0.038
|
Human |
|
ribonucleoside triphosphate metabolic process
|
GO:0009199 |
356 |
0.038
|
Human |
|
organonitrogen compound catabolic process
|
GO:1901565 |
404 |
0.038
|
Human |
|
external encapsulating structure organization
|
GO:0045229 |
146 |
0.037
|
|
|
negative regulation of cellular metabolic process
|
GO:0031324 |
407 |
0.037
|
|
|
nucleoside monophosphate catabolic process
|
GO:0009125 |
224 |
0.037
|
Human |
|
negative regulation of cellular biosynthetic process
|
GO:0031327 |
312 |
0.037
|
|
|
negative regulation of gene expression epigenetic
|
GO:0045814 |
147 |
0.037
|
|
|
peptidyl lysine modification
|
GO:0018205 |
77 |
0.037
|
|
|
reproductive process
|
GO:0022414 |
248 |
0.036
|
|
|
protein transport
|
GO:0015031 |
345 |
0.036
|
|
|
nucleoside catabolic process
|
GO:0009164 |
335 |
0.035
|
Human |
|
ribonucleotide catabolic process
|
GO:0009261 |
327 |
0.034
|
Human |
|
negative regulation of nucleobase containing compound metabolic process
|
GO:0045934 |
295 |
0.034
|
|
|
purine ribonucleoside catabolic process
|
GO:0046130 |
330 |
0.034
|
Human |
|
cell wall organization or biogenesis
|
GO:0071554 |
190 |
0.034
|
|
|
negative regulation of rna metabolic process
|
GO:0051253 |
262 |
0.034
|
|
|
negative regulation of nitrogen compound metabolic process
|
GO:0051172 |
300 |
0.033
|
|
|
chromatin silencing at silent mating type cassette
|
GO:0030466 |
53 |
0.033
|
|
|
protein dna complex subunit organization
|
GO:0071824 |
153 |
0.033
|
|
|
protein methylation
|
GO:0006479 |
48 |
0.032
|
|
|
gene silencing
|
GO:0016458 |
151 |
0.030
|
|
|
nucleoside triphosphate catabolic process
|
GO:0009143 |
329 |
0.030
|
Human |
|
nucleocytoplasmic transport
|
GO:0006913 |
163 |
0.030
|
|
|
glycosyl compound metabolic process
|
GO:1901657 |
398 |
0.030
|
Human |
|
chromatin organization
|
GO:0006325 |
242 |
0.030
|
|
|
chromatin modification
|
GO:0016568 |
200 |
0.030
|
|
|
rna localization
|
GO:0006403 |
112 |
0.029
|
|
|
regulation of biological quality
|
GO:0065008 |
391 |
0.029
|
|
|
purine nucleoside metabolic process
|
GO:0042278 |
380 |
0.029
|
Human |
|
negative regulation of macromolecule metabolic process
|
GO:0010605 |
375 |
0.029
|
|
|
histone modification
|
GO:0016570 |
119 |
0.028
|
|
|
glycosyl compound catabolic process
|
GO:1901658 |
335 |
0.028
|
Human |
|
regulation of mitotic cell cycle phase transition
|
GO:1901990 |
68 |
0.027
|
|
|
single organism developmental process
|
GO:0044767 |
258 |
0.027
|
|
|
cell growth
|
GO:0016049 |
89 |
0.027
|
|
|
mitotic nuclear division
|
GO:0007067 |
131 |
0.026
|
|
|
single organism cellular localization
|
GO:1902580 |
375 |
0.026
|
|
|
fungal type cell wall organization
|
GO:0031505 |
145 |
0.026
|
|
|
purine nucleoside monophosphate catabolic process
|
GO:0009128 |
224 |
0.026
|
Human |
|
positive regulation of nitrogen compound metabolic process
|
GO:0051173 |
412 |
0.026
|
|
|
purine nucleoside triphosphate catabolic process
|
GO:0009146 |
329 |
0.026
|
Human |
|
cellular response to chemical stimulus
|
GO:0070887 |
315 |
0.025
|
|
|
negative regulation of rna biosynthetic process
|
GO:1902679 |
260 |
0.025
|
|
|
nuclear transport
|
GO:0051169 |
165 |
0.025
|
|
|
oxidation reduction process
|
GO:0055114 |
353 |
0.024
|
|
|
regulation of gene expression epigenetic
|
GO:0040029 |
147 |
0.024
|
|
|
regulation of cell cycle
|
GO:0051726 |
195 |
0.024
|
|
|
cellular lipid metabolic process
|
GO:0044255 |
229 |
0.023
|
|
|
multi organism process
|
GO:0051704 |
233 |
0.023
|
|
|
regulation of cell cycle phase transition
|
GO:1901987 |
70 |
0.023
|
|
|
covalent chromatin modification
|
GO:0016569 |
119 |
0.023
|
|
|
single organism reproductive process
|
GO:0044702 |
159 |
0.023
|
|
|
establishment of protein localization
|
GO:0045184 |
367 |
0.023
|
|
|
peptidyl lysine methylation
|
GO:0018022 |
24 |
0.023
|
|
|
macromolecule catabolic process
|
GO:0009057 |
383 |
0.022
|
|
|
negative regulation of biosynthetic process
|
GO:0009890 |
312 |
0.022
|
|
|
rrna metabolic process
|
GO:0016072 |
244 |
0.022
|
|
|
proteolysis
|
GO:0006508 |
268 |
0.021
|
|
|
response to temperature stimulus
|
GO:0009266 |
74 |
0.021
|
|
|
fungal type cell wall organization or biogenesis
|
GO:0071852 |
169 |
0.020
|
|
|
protein localization to organelle
|
GO:0033365 |
337 |
0.020
|
|
|
translational initiation
|
GO:0006413 |
56 |
0.020
|
|
|
regulation of translation
|
GO:0006417 |
89 |
0.020
|
|
|
lipid metabolic process
|
GO:0006629 |
269 |
0.020
|
|
|
chromatin remodeling
|
GO:0006338 |
80 |
0.020
|
|
|
glycerolipid metabolic process
|
GO:0046486 |
108 |
0.020
|
|
|
trna metabolic process
|
GO:0006399 |
151 |
0.019
|
|
|
endomembrane system organization
|
GO:0010256 |
74 |
0.019
|
|
|
anatomical structure development
|
GO:0048856 |
160 |
0.019
|
|
|
protein glycosylation
|
GO:0006486 |
57 |
0.019
|
|
|
single organism carbohydrate metabolic process
|
GO:0044723 |
237 |
0.019
|
|
|
peroxisome organization
|
GO:0007031 |
68 |
0.019
|
|
|
phospholipid metabolic process
|
GO:0006644 |
125 |
0.019
|
|
|
response to uv
|
GO:0009411 |
4 |
0.019
|
|
|
organophosphate biosynthetic process
|
GO:0090407 |
182 |
0.019
|
|
|
chromatin silencing at telomere
|
GO:0006348 |
84 |
0.019
|
|
|
response to organic cyclic compound
|
GO:0014070 |
1 |
0.018
|
|
|
response to oxidative stress
|
GO:0006979 |
99 |
0.018
|
|
|
response to heat
|
GO:0009408 |
69 |
0.018
|
|
|
rna surveillance
|
GO:0071025 |
30 |
0.018
|
|
|
establishment of organelle localization
|
GO:0051656 |
96 |
0.018
|
|
|
mrna catabolic process
|
GO:0006402 |
93 |
0.018
|
|
|
filamentous growth
|
GO:0030447 |
124 |
0.017
|
|
|
sporulation resulting in formation of a cellular spore
|
GO:0030435 |
129 |
0.017
|
|
|
ncrna processing
|
GO:0034470 |
330 |
0.017
|
|
|
response to abiotic stimulus
|
GO:0009628 |
159 |
0.017
|
|
|
phospholipid biosynthetic process
|
GO:0008654 |
89 |
0.017
|
|
|
cellular response to oxidative stress
|
GO:0034599 |
94 |
0.016
|
|
|
protein ubiquitination
|
GO:0016567 |
118 |
0.016
|
|
|
response to external stimulus
|
GO:0009605 |
158 |
0.016
|
|
|
organelle inheritance
|
GO:0048308 |
51 |
0.016
|
|
|
regulation of dna templated transcription in response to stress
|
GO:0043620 |
51 |
0.016
|
|
|
regulation of cell cycle process
|
GO:0010564 |
150 |
0.016
|
|
|
pseudohyphal growth
|
GO:0007124 |
75 |
0.015
|
|
|
ubiquitin dependent protein catabolic process
|
GO:0006511 |
181 |
0.015
|
|
|
regulation of cellular component organization
|
GO:0051128 |
334 |
0.015
|
|
|
growth
|
GO:0040007 |
157 |
0.015
|
|
|
nucleic acid transport
|
GO:0050657 |
94 |
0.015
|
|
|
positive regulation of catabolic process
|
GO:0009896 |
135 |
0.015
|
|
|
negative regulation of cell cycle phase transition
|
GO:1901988 |
59 |
0.015
|
|
|
ribosomal large subunit biogenesis
|
GO:0042273 |
98 |
0.015
|
|
|
protein modification by small protein conjugation
|
GO:0032446 |
144 |
0.015
|
|
|
cellular response to nutrient levels
|
GO:0031669 |
144 |
0.015
|
|
|
glycoprotein biosynthetic process
|
GO:0009101 |
61 |
0.015
|
|
|
dna recombination
|
GO:0006310 |
172 |
0.015
|
|
|
glycoprotein metabolic process
|
GO:0009100 |
62 |
0.015
|
|
|
proteasome mediated ubiquitin dependent protein catabolic process
|
GO:0043161 |
137 |
0.015
|
|
|
macromolecule methylation
|
GO:0043414 |
85 |
0.015
|
|
|
cellular response to heat
|
GO:0034605 |
53 |
0.014
|
|
|
single organism membrane organization
|
GO:0044802 |
275 |
0.014
|
|
|
cation homeostasis
|
GO:0055080 |
105 |
0.014
|
|
|
posttranscriptional regulation of gene expression
|
GO:0010608 |
115 |
0.014
|
|
|
transposition
|
GO:0032196 |
20 |
0.014
|
|
|
nuclear division
|
GO:0000280 |
263 |
0.014
|
|
|
response to chemical
|
GO:0042221 |
390 |
0.014
|
|
|
positive regulation of protein metabolic process
|
GO:0051247 |
93 |
0.014
|
|
|
rna transport
|
GO:0050658 |
92 |
0.014
|
|
|
modification dependent protein catabolic process
|
GO:0019941 |
181 |
0.013
|
|
|
cellular response to starvation
|
GO:0009267 |
90 |
0.013
|
|
|
cellular component disassembly
|
GO:0022411 |
86 |
0.013
|
|
|
mrna export from nucleus
|
GO:0006406 |
60 |
0.013
|
|
|
nucleic acid phosphodiester bond hydrolysis
|
GO:0090305 |
194 |
0.013
|
|
|
ion transport
|
GO:0006811 |
274 |
0.013
|
|
|
negative regulation of cell cycle process
|
GO:0010948 |
86 |
0.013
|
|
|
filamentous growth of a population of unicellular organisms
|
GO:0044182 |
109 |
0.013
|
|
|
homeostatic process
|
GO:0042592 |
227 |
0.013
|
|
|
anatomical structure morphogenesis
|
GO:0009653 |
160 |
0.013
|
|
|
regulation of catabolic process
|
GO:0009894 |
199 |
0.013
|
|
|
cellular response to organic substance
|
GO:0071310 |
159 |
0.013
|
|
|
cell cycle g1 s phase transition
|
GO:0044843 |
64 |
0.013
|
|
|
nuclear export
|
GO:0051168 |
124 |
0.013
|
|
|
protein localization to nucleus
|
GO:0034504 |
74 |
0.013
|
|
|
single organism signaling
|
GO:0044700 |
208 |
0.012
|
|
|
signaling
|
GO:0023052 |
208 |
0.012
|
|
|
chemical homeostasis
|
GO:0048878 |
137 |
0.012
|
|
|
cellular ion homeostasis
|
GO:0006873 |
112 |
0.012
|
|
|
mitotic recombination
|
GO:0006312 |
55 |
0.012
|
|
|
atp dependent chromatin remodeling
|
GO:0043044 |
36 |
0.012
|
|
|
lipid biosynthetic process
|
GO:0008610 |
170 |
0.012
|
|
|
rna catabolic process
|
GO:0006401 |
118 |
0.012
|
|
|
cellular metal ion homeostasis
|
GO:0006875 |
78 |
0.012
|
|
|
regulation of dna templated transcription elongation
|
GO:0032784 |
44 |
0.012
|
|
|
regulation of nucleotide metabolic process
|
GO:0006140 |
110 |
0.012
|
|
|
protein acylation
|
GO:0043543 |
66 |
0.012
|
|
|
cell communication
|
GO:0007154 |
345 |
0.012
|
|
|
regulation of organelle organization
|
GO:0033043 |
243 |
0.012
|
|
|
carboxylic acid metabolic process
|
GO:0019752 |
338 |
0.012
|
|
|
intracellular protein transport
|
GO:0006886 |
319 |
0.012
|
|
|
fatty acid metabolic process
|
GO:0006631 |
51 |
0.011
|
|
|
glycerophospholipid metabolic process
|
GO:0006650 |
98 |
0.011
|
|
|
regulation of mrna splicing via spliceosome
|
GO:0048024 |
3 |
0.011
|
|
|
peptidyl amino acid modification
|
GO:0018193 |
116 |
0.011
|
|
|
cellular developmental process
|
GO:0048869 |
191 |
0.011
|
|
|
rna export from nucleus
|
GO:0006405 |
88 |
0.011
|
|
|
cellular homeostasis
|
GO:0019725 |
138 |
0.011
|
|
|
internal protein amino acid acetylation
|
GO:0006475 |
52 |
0.011
|
|
|
developmental process involved in reproduction
|
GO:0003006 |
159 |
0.011
|
|
|
positive regulation of programmed cell death
|
GO:0043068 |
3 |
0.011
|
|
|
multi organism cellular process
|
GO:0044764 |
120 |
0.011
|
|
|
ascospore formation
|
GO:0030437 |
107 |
0.011
|
|
|
protein maturation
|
GO:0051604 |
76 |
0.011
|
|
|
response to osmotic stress
|
GO:0006970 |
83 |
0.011
|
|
|
nucleus organization
|
GO:0006997 |
62 |
0.011
|
|
|
aging
|
GO:0007568 |
71 |
0.011
|
|
|
conjugation
|
GO:0000746 |
107 |
0.011
|
|
|
snrna metabolic process
|
GO:0016073 |
25 |
0.011
|
|
|
rrna transcription
|
GO:0009303 |
31 |
0.011
|
|
|
response to organic substance
|
GO:0010033 |
182 |
0.011
|
|
|
regulation of filamentous growth of a population of unicellular organisms
|
GO:1900428 |
36 |
0.011
|
|
|
dephosphorylation
|
GO:0016311 |
127 |
0.011
|
|
|
meiotic cell cycle process
|
GO:1903046 |
229 |
0.011
|
|
|
ribonucleoprotein complex subunit organization
|
GO:0071826 |
152 |
0.011
|
|
|
negative regulation of organelle organization
|
GO:0010639 |
103 |
0.011
|
|
|
dna templated transcription termination
|
GO:0006353 |
42 |
0.010
|
|
|
nuclear rna surveillance
|
GO:0071027 |
30 |
0.010
|
|
|
mrna 3 end processing
|
GO:0031124 |
54 |
0.010
|
|
|
cellular amine metabolic process
|
GO:0044106 |
51 |
0.010
|
|
|
invasive growth in response to glucose limitation
|
GO:0001403 |
61 |
0.010
|
|
|
meiotic cell cycle
|
GO:0051321 |
272 |
0.010
|
|
|
positive regulation of cell death
|
GO:0010942 |
3 |
0.010
|
|
|
invasive filamentous growth
|
GO:0036267 |
65 |
0.010
|
|
|
regulation of response to stress
|
GO:0080134 |
57 |
0.010
|
|