Saccharomyces cerevisiae

22 known processes

RKM1 (YPL208W)

Rkm1p

RKM1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
protein transport GO:0015031 345 0.248
establishment of protein localization GO:0045184 367 0.121
nucleobase containing small molecule metabolic process GO:0055086 491 0.113
histone modification GO:0016570 119 0.101
protein modification by small protein conjugation GO:0032446 144 0.100
protein modification by small protein conjugation or removal GO:0070647 172 0.098
organophosphate metabolic process GO:0019637 597 0.094
nucleoside phosphate metabolic process GO:0006753 458 0.092
carbohydrate derivative biosynthetic process GO:1901137 181 0.091
intracellular protein transport GO:0006886 319 0.086
single organism catabolic process GO:0044712 619 0.084
cellular response to starvation GO:0009267 90 0.082
organonitrogen compound catabolic process GO:1901565 404 0.078
regulation of biological quality GO:0065008 391 0.076
carbohydrate derivative metabolic process GO:1901135 549 0.074
nucleoside monophosphate metabolic process GO:0009123 267 0.069
ribonucleoside triphosphate catabolic process GO:0009203 327 0.066
endosomal transport GO:0016197 86 0.064
regulation of protein metabolic process GO:0051246 237 0.062
carbohydrate metabolic process GO:0005975 252 0.057
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.056
recombinational repair GO:0000725 64 0.055
dna repair GO:0006281 236 0.055
response to extracellular stimulus GO:0009991 156 0.054
purine nucleoside catabolic process GO:0006152 330 0.053
organic acid metabolic process GO:0006082 352 0.052
cellular amino acid metabolic process GO:0006520 225 0.052
oxoacid metabolic process GO:0043436 351 0.052
establishment of protein localization to organelle GO:0072594 278 0.052
single organism cellular localization GO:1902580 375 0.051
regulation of molecular function GO:0065009 320 0.050
ribonucleoside catabolic process GO:0042454 332 0.048
carboxylic acid metabolic process GO:0019752 338 0.048
response to chemical GO:0042221 390 0.047
purine ribonucleoside catabolic process GO:0046130 330 0.044
response to organic cyclic compound GO:0014070 1 0.044
nucleoside catabolic process GO:0009164 335 0.043
cellular response to dna damage stimulus GO:0006974 287 0.043
purine nucleoside metabolic process GO:0042278 380 0.042
membrane organization GO:0061024 276 0.042
reciprocal dna recombination GO:0035825 54 0.041
guanosine containing compound metabolic process GO:1901068 111 0.040
protein targeting GO:0006605 272 0.040
double strand break repair via homologous recombination GO:0000724 54 0.039
nucleotide metabolic process GO:0009117 453 0.039
protein localization to membrane GO:0072657 102 0.037
protein localization to organelle GO:0033365 337 0.037
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.036
protein ubiquitination GO:0016567 118 0.036
external encapsulating structure organization GO:0045229 146 0.035
nucleoside metabolic process GO:0009116 394 0.035
organic cyclic compound catabolic process GO:1901361 499 0.035
intracellular protein transmembrane transport GO:0065002 80 0.034
cellular response to chemical stimulus GO:0070887 315 0.033
transmembrane transport GO:0055085 349 0.033
vesicle mediated transport GO:0016192 335 0.032
signaling GO:0023052 208 0.032
negative regulation of gene expression GO:0010629 312 0.032
transition metal ion homeostasis GO:0055076 59 0.032
glycosyl compound catabolic process GO:1901658 335 0.032
ribonucleoside triphosphate metabolic process GO:0009199 356 0.031
purine ribonucleotide metabolic process GO:0009150 372 0.031
purine ribonucleotide catabolic process GO:0009154 327 0.030
organophosphate catabolic process GO:0046434 338 0.030
protein acylation GO:0043543 66 0.029
response to external stimulus GO:0009605 158 0.029
purine containing compound catabolic process GO:0072523 332 0.028
macromolecule glycosylation GO:0043413 57 0.027
ribonucleoside metabolic process GO:0009119 389 0.027
nucleoside phosphate catabolic process GO:1901292 331 0.027
protein transmembrane transport GO:0071806 82 0.027
purine ribonucleoside monophosphate catabolic process GO:0009169 224 0.027
single organism membrane fusion GO:0044801 71 0.026
meiotic cell cycle GO:0051321 272 0.026
regulation of catabolic process GO:0009894 199 0.026
ribonucleotide catabolic process GO:0009261 327 0.026
negative regulation of cell cycle GO:0045786 91 0.026
glycoprotein biosynthetic process GO:0009101 61 0.025
regulation of cell communication GO:0010646 124 0.025
purine nucleotide catabolic process GO:0006195 328 0.025
purine ribonucleoside triphosphate metabolic process GO:0009205 354 0.025
purine ribonucleoside metabolic process GO:0046128 380 0.025
regulation of catalytic activity GO:0050790 307 0.024
dna geometric change GO:0032392 43 0.024
protein import GO:0017038 122 0.024
posttranscriptional regulation of gene expression GO:0010608 115 0.024
negative regulation of mitotic cell cycle phase transition GO:1901991 57 0.024
mitochondrion organization GO:0007005 261 0.023
golgi vesicle transport GO:0048193 188 0.023
negative regulation of mitotic cell cycle GO:0045930 63 0.023
response to abiotic stimulus GO:0009628 159 0.023
cellular response to extracellular stimulus GO:0031668 150 0.022
protein acetylation GO:0006473 59 0.022
nucleotide catabolic process GO:0009166 330 0.022
protein glycosylation GO:0006486 57 0.022
internal protein amino acid acetylation GO:0006475 52 0.022
cellular nitrogen compound catabolic process GO:0044270 494 0.021
nucleobase containing compound catabolic process GO:0034655 479 0.021
post golgi vesicle mediated transport GO:0006892 72 0.021
cellular modified amino acid metabolic process GO:0006575 51 0.021
cellular response to external stimulus GO:0071496 150 0.021
negative regulation of protein metabolic process GO:0051248 85 0.021
negative regulation of nucleic acid templated transcription GO:1903507 260 0.021
regulation of hydrolase activity GO:0051336 133 0.020
regulation of intracellular signal transduction GO:1902531 78 0.020
regulation of gene expression epigenetic GO:0040029 147 0.020
positive regulation of cellular catabolic process GO:0031331 128 0.020
single organism signaling GO:0044700 208 0.020
metal ion homeostasis GO:0055065 79 0.020
cellular macromolecule catabolic process GO:0044265 363 0.020
regulation of nucleotide catabolic process GO:0030811 106 0.020
cellular cation homeostasis GO:0030003 100 0.020
glycosylation GO:0070085 66 0.019
purine ribonucleoside triphosphate catabolic process GO:0009207 327 0.019
peroxisome organization GO:0007031 68 0.019
ribonucleotide metabolic process GO:0009259 377 0.019
dna conformation change GO:0071103 98 0.019
cellular transition metal ion homeostasis GO:0046916 59 0.019
chromatin silencing GO:0006342 147 0.019
atp metabolic process GO:0046034 251 0.019
nuclear transport GO:0051169 165 0.019
dna duplex unwinding GO:0032508 42 0.018
macromolecular complex disassembly GO:0032984 80 0.018
chromosome condensation GO:0030261 19 0.018
ribonucleoside monophosphate metabolic process GO:0009161 265 0.018
endomembrane system organization GO:0010256 74 0.018
protein targeting to membrane GO:0006612 52 0.018
autophagy GO:0006914 106 0.018
meiotic cell cycle process GO:1903046 229 0.018
vacuolar transport GO:0007034 145 0.018
cell wall organization GO:0071555 146 0.018
carbohydrate derivative catabolic process GO:1901136 339 0.017
response to nutrient levels GO:0031667 150 0.017
reciprocal meiotic recombination GO:0007131 54 0.017
regulation of cellular catabolic process GO:0031329 195 0.017
purine containing compound metabolic process GO:0072521 400 0.017
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.017
nucleocytoplasmic transport GO:0006913 163 0.017
cellular lipid metabolic process GO:0044255 229 0.017
negative regulation of cellular biosynthetic process GO:0031327 312 0.017
homeostatic process GO:0042592 227 0.017
regulation of translation GO:0006417 89 0.016
cellular amide metabolic process GO:0043603 59 0.016
purine nucleoside monophosphate catabolic process GO:0009128 224 0.016
establishment of protein localization to membrane GO:0090150 99 0.016
positive regulation of response to stimulus GO:0048584 37 0.016
postreplication repair GO:0006301 24 0.016
positive regulation of apoptotic process GO:0043065 3 0.016
positive regulation of catabolic process GO:0009896 135 0.016
sulfur compound metabolic process GO:0006790 95 0.016
phosphorylation GO:0016310 291 0.016
peptidyl lysine acetylation GO:0018394 52 0.016
positive regulation of cell communication GO:0010647 28 0.015
negative regulation of cellular metabolic process GO:0031324 407 0.015
meiosis i GO:0007127 92 0.015
ribonucleoside monophosphate catabolic process GO:0009158 224 0.015
nucleoside triphosphate metabolic process GO:0009141 364 0.015
nucleoside monophosphate catabolic process GO:0009125 224 0.015
fungal type cell wall organization GO:0031505 145 0.015
covalent chromatin modification GO:0016569 119 0.014
histone acetylation GO:0016573 51 0.014
regulation of purine nucleotide catabolic process GO:0033121 106 0.014
positive regulation of secretion GO:0051047 2 0.014
nucleoside triphosphate catabolic process GO:0009143 329 0.014
fungal type cell wall organization or biogenesis GO:0071852 169 0.014
cellular protein catabolic process GO:0044257 213 0.014
organelle inheritance GO:0048308 51 0.014
dna packaging GO:0006323 55 0.014
protein complex assembly GO:0006461 302 0.014
monocarboxylic acid metabolic process GO:0032787 122 0.014
aromatic compound catabolic process GO:0019439 491 0.014
purine nucleoside triphosphate catabolic process GO:0009146 329 0.014
nucleobase containing compound transport GO:0015931 124 0.014
chromatin modification GO:0016568 200 0.014
negative regulation of nitrogen compound metabolic process GO:0051172 300 0.014
regulation of cellular localization GO:0060341 50 0.014
cell communication GO:0007154 345 0.013
chemical homeostasis GO:0048878 137 0.013
purine nucleotide metabolic process GO:0006163 376 0.013
positive regulation of purine nucleotide catabolic process GO:0033123 97 0.013
vesicle organization GO:0016050 68 0.013
cellular response to organic substance GO:0071310 159 0.013
establishment or maintenance of cell polarity GO:0007163 96 0.013
ribose phosphate metabolic process GO:0019693 384 0.013
negative regulation of macromolecule metabolic process GO:0010605 375 0.013
cellular ketone metabolic process GO:0042180 63 0.013
heterocycle catabolic process GO:0046700 494 0.013
n terminal protein amino acid acetylation GO:0006474 8 0.013
positive regulation of hydrolase activity GO:0051345 112 0.012
anatomical structure formation involved in morphogenesis GO:0048646 136 0.012
nucleotide excision repair GO:0006289 50 0.012
purine ribonucleoside monophosphate metabolic process GO:0009167 262 0.012
fatty acid metabolic process GO:0006631 51 0.012
negative regulation of gene expression epigenetic GO:0045814 147 0.012
regulation of protein localization GO:0032880 62 0.012
single organism developmental process GO:0044767 258 0.012
response to uv GO:0009411 4 0.012
golgi to plasma membrane transport GO:0006893 33 0.012
regulation of purine nucleotide metabolic process GO:1900542 109 0.012
oxidation reduction process GO:0055114 353 0.012
maintenance of location GO:0051235 66 0.012
amine metabolic process GO:0009308 51 0.012
protein n linked glycosylation GO:0006487 34 0.012
gtp catabolic process GO:0006184 107 0.012
cellular response to nutrient levels GO:0031669 144 0.012
carboxylic acid biosynthetic process GO:0046394 152 0.011
cellular chemical homeostasis GO:0055082 123 0.011
cell cycle g2 m phase transition GO:0044839 39 0.011
secretion by cell GO:0032940 50 0.011
negative regulation of organelle organization GO:0010639 103 0.011
single organism carbohydrate metabolic process GO:0044723 237 0.011
positive regulation of nucleoside metabolic process GO:0045979 97 0.011
regulation of cellular amino acid metabolic process GO:0006521 16 0.011
regulation of cell cycle GO:0051726 195 0.011
cell cycle checkpoint GO:0000075 82 0.011
membrane fusion GO:0061025 73 0.011
positive regulation of catalytic activity GO:0043085 178 0.011
cellular metal ion homeostasis GO:0006875 78 0.011
negative regulation of transcription dna templated GO:0045892 258 0.010
regulation of cellular protein metabolic process GO:0032268 232 0.010
regulation of mitotic cell cycle GO:0007346 107 0.010
response to starvation GO:0042594 96 0.010
retrograde vesicle mediated transport golgi to er GO:0006890 28 0.010
internal peptidyl lysine acetylation GO:0018393 52 0.010
glycosyl compound metabolic process GO:1901657 398 0.010
glycerophospholipid metabolic process GO:0006650 98 0.010
regulation of cellular amine metabolic process GO:0033238 21 0.010
positive regulation of molecular function GO:0044093 185 0.010
positive regulation of cellular protein metabolic process GO:0032270 89 0.010
establishment of protein localization to mitochondrion GO:0072655 63 0.010
cellular amine metabolic process GO:0044106 51 0.010
organic acid biosynthetic process GO:0016053 152 0.010

RKM1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.012
cancer DOID:162 0 0.011
disease of cellular proliferation DOID:14566 0 0.011
organ system cancer DOID:0050686 0 0.011