Saccharomyces cerevisiae

61 known processes

SAM4 (YPL273W)

Sam4p

SAM4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
cellular amino acid metabolic process GO:0006520 225 0.518
alpha amino acid metabolic process GO:1901605 124 0.284
organonitrogen compound biosynthetic process GO:1901566 314 0.271
small molecule biosynthetic process GO:0044283 258 0.253
organic acid biosynthetic process GO:0016053 152 0.204
carboxylic acid biosynthetic process GO:0046394 152 0.166
oxoacid metabolic process GO:0043436 351 0.165
carboxylic acid metabolic process GO:0019752 338 0.146
alpha amino acid biosynthetic process GO:1901607 91 0.143
organic anion transport GO:0015711 114 0.133
sulfur compound metabolic process GO:0006790 95 0.130
single organism catabolic process GO:0044712 619 0.117
aspartate family amino acid metabolic process GO:0009066 40 0.110
cellular amino acid biosynthetic process GO:0008652 118 0.110
organic acid metabolic process GO:0006082 352 0.104
sulfur compound biosynthetic process GO:0044272 53 0.083
carboxylic acid transport GO:0046942 74 0.072
mitochondrion organization GO:0007005 261 0.069
pyridine containing compound metabolic process GO:0072524 53 0.065
regulation of protein metabolic process GO:0051246 237 0.060
amino acid transport GO:0006865 45 0.056
positive regulation of nitrogen compound metabolic process GO:0051173 412 0.048
vacuolar transport GO:0007034 145 0.044
positive regulation of macromolecule metabolic process GO:0010604 394 0.044
organonitrogen compound catabolic process GO:1901565 404 0.042
negative regulation of cellular metabolic process GO:0031324 407 0.039
mitochondrial transport GO:0006839 76 0.037
developmental process GO:0032502 261 0.036
positive regulation of nucleobase containing compound metabolic process GO:0045935 409 0.035
peptidyl amino acid modification GO:0018193 116 0.035
nitrogen compound transport GO:0071705 212 0.035
cellular amide metabolic process GO:0043603 59 0.034
cell communication GO:0007154 345 0.033
cellular amine metabolic process GO:0044106 51 0.033
cofactor metabolic process GO:0051186 126 0.031
positive regulation of cellular biosynthetic process GO:0031328 336 0.031
positive regulation of gene expression GO:0010628 321 0.030
dephosphorylation GO:0016311 127 0.030
sulfur amino acid biosynthetic process GO:0000097 19 0.029
heterocycle catabolic process GO:0046700 494 0.029
aromatic compound catabolic process GO:0019439 491 0.029
regulation of molecular function GO:0065009 320 0.029
positive regulation of biosynthetic process GO:0009891 336 0.029
water soluble vitamin metabolic process GO:0006767 41 0.029
trna metabolic process GO:0006399 151 0.028
vitamin metabolic process GO:0006766 41 0.028
regulation of catalytic activity GO:0050790 307 0.027
cellular nitrogen compound catabolic process GO:0044270 494 0.027
organic acid catabolic process GO:0016054 71 0.027
amine metabolic process GO:0009308 51 0.027
nucleobase containing small molecule metabolic process GO:0055086 491 0.027
regulation of transcription from rna polymerase ii promoter GO:0006357 394 0.026
organic cyclic compound catabolic process GO:1901361 499 0.026
mitochondrial translation GO:0032543 52 0.026
signaling GO:0023052 208 0.025
response to chemical GO:0042221 390 0.025
aspartate family amino acid biosynthetic process GO:0009067 29 0.024
proteolysis GO:0006508 268 0.024
organic acid transport GO:0015849 77 0.023
regulation of biological quality GO:0065008 391 0.023
carbohydrate derivative metabolic process GO:1901135 549 0.022
regulation of cellular protein metabolic process GO:0032268 232 0.022
positive regulation of macromolecule biosynthetic process GO:0010557 325 0.022
negative regulation of cellular macromolecule biosynthetic process GO:2000113 289 0.022
organic hydroxy compound metabolic process GO:1901615 125 0.021
glutamine family amino acid metabolic process GO:0009064 31 0.021
chemical homeostasis GO:0048878 137 0.021
alpha amino acid catabolic process GO:1901606 28 0.020
organophosphate metabolic process GO:0019637 597 0.020
rna 5 end processing GO:0000966 33 0.020
cellular component disassembly GO:0022411 86 0.020
macromolecular complex disassembly GO:0032984 80 0.020
regulation of hydrolase activity GO:0051336 133 0.020
water soluble vitamin biosynthetic process GO:0042364 38 0.019
signal transduction GO:0007165 208 0.019
phospholipid metabolic process GO:0006644 125 0.019
nucleobase containing compound transport GO:0015931 124 0.019
fungal type cell wall organization GO:0031505 145 0.018
reproductive process GO:0022414 248 0.018
negative regulation of macromolecule metabolic process GO:0010605 375 0.018
cellular modified amino acid metabolic process GO:0006575 51 0.018
positive regulation of transcription dna templated GO:0045893 286 0.018
vitamin biosynthetic process GO:0009110 38 0.018
positive regulation of cellular catabolic process GO:0031331 128 0.018
negative regulation of cellular protein metabolic process GO:0032269 85 0.017
multi organism process GO:0051704 233 0.017
cell aging GO:0007569 70 0.017
cellular metabolic compound salvage GO:0043094 20 0.017
regulation of cellular component organization GO:0051128 334 0.017
regulation of localization GO:0032879 127 0.017
cellular response to chemical stimulus GO:0070887 315 0.017
cellular macromolecule catabolic process GO:0044265 363 0.017
branched chain amino acid metabolic process GO:0009081 16 0.017
single organism developmental process GO:0044767 258 0.017
membrane organization GO:0061024 276 0.016
rrna 5 end processing GO:0000967 32 0.016
nucleoside metabolic process GO:0009116 394 0.016
glycerophospholipid metabolic process GO:0006650 98 0.016
single organism signaling GO:0044700 208 0.016
carboxylic acid catabolic process GO:0046395 71 0.016
aromatic amino acid family biosynthetic process GO:0009073 9 0.016
coenzyme biosynthetic process GO:0009108 66 0.016
sexual reproduction GO:0019953 216 0.016
methionine metabolic process GO:0006555 19 0.015
purine containing compound metabolic process GO:0072521 400 0.015
protein complex biogenesis GO:0070271 314 0.015
translation GO:0006412 230 0.015
regulation of phosphate metabolic process GO:0019220 230 0.015
regulation of catabolic process GO:0009894 199 0.015
cellular lipid metabolic process GO:0044255 229 0.015
positive regulation of molecular function GO:0044093 185 0.015
nucleobase containing compound catabolic process GO:0034655 479 0.015
single organism cellular localization GO:1902580 375 0.015
lipid metabolic process GO:0006629 269 0.015
cellular homeostasis GO:0019725 138 0.015
cellular response to oxidative stress GO:0034599 94 0.015
glycosyl compound metabolic process GO:1901657 398 0.014
purine nucleotide catabolic process GO:0006195 328 0.014
regulation of cellular catabolic process GO:0031329 195 0.014
pyridine nucleotide metabolic process GO:0019362 45 0.014
reproductive process in single celled organism GO:0022413 145 0.014
cofactor biosynthetic process GO:0051188 80 0.014
regulation of phosphorus metabolic process GO:0051174 230 0.014
positive regulation of hydrolase activity GO:0051345 112 0.014
oxidoreduction coenzyme metabolic process GO:0006733 58 0.014
proteolysis involved in cellular protein catabolic process GO:0051603 198 0.013
single organism carbohydrate metabolic process GO:0044723 237 0.013
cellular cation homeostasis GO:0030003 100 0.013
positive regulation of catabolic process GO:0009896 135 0.013
response to abiotic stimulus GO:0009628 159 0.013
rna localization GO:0006403 112 0.013
nuclear transcribed mrna catabolic process GO:0000956 89 0.013
macromolecule catabolic process GO:0009057 383 0.013
negative regulation of phosphate metabolic process GO:0045936 49 0.013
peptidyl lysine modification GO:0018205 77 0.013
coenzyme metabolic process GO:0006732 104 0.013
purine ribonucleoside metabolic process GO:0046128 380 0.013
posttranscriptional regulation of gene expression GO:0010608 115 0.013
carbohydrate derivative catabolic process GO:1901136 339 0.013
positive regulation of rna biosynthetic process GO:1902680 286 0.013
mitotic cell cycle process GO:1903047 294 0.013
positive regulation of organelle organization GO:0010638 85 0.012
amino acid activation GO:0043038 35 0.012
regulation of translation GO:0006417 89 0.012
negative regulation of phosphorus metabolic process GO:0010563 49 0.012
response to organic substance GO:0010033 182 0.012
positive regulation of nucleic acid templated transcription GO:1903508 286 0.012
ion homeostasis GO:0050801 118 0.012
establishment or maintenance of cell polarity GO:0007163 96 0.012
nucleobase metabolic process GO:0009112 22 0.012
filamentous growth GO:0030447 124 0.012
regulation of cellular amino acid metabolic process GO:0006521 16 0.012
cell cycle checkpoint GO:0000075 82 0.012
positive regulation of purine nucleotide metabolic process GO:1900544 100 0.012
ion transport GO:0006811 274 0.012
mitotic cell cycle GO:0000278 306 0.012
cellular amino acid catabolic process GO:0009063 48 0.012
small molecule catabolic process GO:0044282 88 0.012
multi organism reproductive process GO:0044703 216 0.012
aromatic amino acid family metabolic process GO:0009072 17 0.012
oxidation reduction process GO:0055114 353 0.012
trna aminoacylation for protein translation GO:0006418 32 0.011
protein complex assembly GO:0006461 302 0.011
cellular ketone metabolic process GO:0042180 63 0.011
transition metal ion homeostasis GO:0055076 59 0.011
conjugation with cellular fusion GO:0000747 106 0.011
carbohydrate derivative biosynthetic process GO:1901137 181 0.011
anion transport GO:0006820 145 0.011
regulation of cellular component biogenesis GO:0044087 112 0.011
fungal type cell wall organization or biogenesis GO:0071852 169 0.011
glutamine family amino acid biosynthetic process GO:0009084 18 0.011
positive regulation of rna metabolic process GO:0051254 294 0.011
purine containing compound biosynthetic process GO:0072522 53 0.011
aging GO:0007568 71 0.011
positive regulation of protein metabolic process GO:0051247 93 0.011
regulation of small gtpase mediated signal transduction GO:0051056 47 0.011
homeostatic process GO:0042592 227 0.011
cellular transition metal ion homeostasis GO:0046916 59 0.011
reproduction of a single celled organism GO:0032505 191 0.010
regulation of intracellular signal transduction GO:1902531 78 0.010
nucleoside phosphate catabolic process GO:1901292 331 0.010
response to oxidative stress GO:0006979 99 0.010
nucleic acid phosphodiester bond hydrolysis GO:0090305 194 0.010
positive regulation of catalytic activity GO:0043085 178 0.010
single organism membrane organization GO:0044802 275 0.010
amine biosynthetic process GO:0009309 9 0.010
organic hydroxy compound biosynthetic process GO:1901617 81 0.010
anatomical structure morphogenesis GO:0009653 160 0.010
trna aminoacylation GO:0043039 35 0.010
protein methylation GO:0006479 48 0.010
protein catabolic process GO:0030163 221 0.010
regulation of response to stimulus GO:0048583 157 0.010

SAM4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in yeast and predicted with the yeast functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.011