Homo sapiens

80 known processes

USP4

ubiquitin specific peptidase 4 (proto-oncogene)

(Aliases: UNP,MGC149848,MGC149849,Unph)

USP4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
protein polyubiquitination GO:0000209 110 0.710
protein monoubiquitination GO:0006513 39 0.590
protein k48 linked ubiquitination GO:0070936 38 0.558
cellular macromolecule catabolic process GO:0044265 380 0.553
Human
modification dependent protein catabolic process GO:0019941 209 0.514
Human
ribonucleoprotein complex biogenesis GO:0022613 116 0.448
metal ion transport GO:0030001 272 0.445
protein ubiquitination GO:0016567 314 0.400
regulation of ion transport GO:0043269 189 0.393
negative regulation of protein modification process GO:0031400 200 0.383
regulation of cellular component movement GO:0051270 334 0.380
cellular macromolecular complex assembly GO:0034622 324 0.342
protein catabolic process GO:0030163 325 0.335
Human
negative regulation of programmed cell death GO:0043069 321 0.326
modification dependent macromolecule catabolic process GO:0043632 212 0.324
Human
post embryonic development GO:0009791 2 0.324
protein modification by small protein removal GO:0070646 92 0.316
mitotic cell cycle process GO:1903047 286 0.293
regulation of cell migration GO:0030334 289 0.293
protein deubiquitination GO:0016579 79 0.293
mrna metabolic process GO:0016071 175 0.291
nitrogen compound transport GO:0071705 191 0.246
ubiquitin dependent protein catabolic process GO:0006511 206 0.244
Human
negative regulation of catalytic activity GO:0043086 335 0.242
protein ubiquitination involved in ubiquitin dependent protein catabolic process GO:0042787 37 0.241
positive regulation of cell death GO:0010942 263 0.217
negative regulation of protein metabolic process GO:0051248 391 0.214
spliceosomal snrnp assembly GO:0000387 28 0.212
ncrna metabolic process GO:0034660 108 0.210
apoptotic signaling pathway GO:0097190 268 0.201
ion transmembrane transport GO:0034220 338 0.183
regulation of transferase activity GO:0051338 355 0.181
cellular amine metabolic process GO:0044106 41 0.181
proteasomal protein catabolic process GO:0010498 176 0.176
Human
regulation of viral transcription GO:0046782 34 0.168
cation transport GO:0006812 331 0.166
regulation of protein ubiquitination GO:0031396 95 0.162
ras protein signal transduction GO:0007265 73 0.161
proteoglycan catabolic process GO:0030167 3 0.160
regulation of locomotion GO:0040012 329 0.158
protein modification by small protein conjugation GO:0032446 342 0.156
guanosine containing compound metabolic process GO:1901068 244 0.156
regulation of cell motility GO:2000145 299 0.153
vesicle mediated transport GO:0016192 371 0.152
regulation of cellular amino acid metabolic process GO:0006521 6 0.137
negative regulation of cell death GO:0060548 345 0.136
nuclear transport GO:0051169 179 0.135
regulation of calcium ion transport GO:0051924 79 0.134
negative regulation of locomotion GO:0040013 118 0.131
regulation of mapk cascade GO:0043408 262 0.129
regulation of protein kinase activity GO:0045859 289 0.128
positive regulation of nucleotide metabolic process GO:0045981 230 0.127
posttranscriptional regulation of gene expression GO:0010608 213 0.124
endomembrane system organization GO:0010256 196 0.119
organelle fission GO:0048285 149 0.119
regulation of protein secretion GO:0050708 86 0.116
tumor necrosis factor production GO:0032640 43 0.116
cellular protein catabolic process GO:0044257 261 0.116
Human
small gtpase mediated signal transduction GO:0007264 78 0.115
protein secretion GO:0009306 98 0.112
divalent inorganic cation transport GO:0072511 158 0.108
regulation of cell cycle GO:0051726 393 0.107
rna splicing GO:0008380 131 0.104
response to oxygen containing compound GO:1901700 369 0.103
calcium ion transport GO:0006816 147 0.103
mapk cascade GO:0000165 288 0.101
positive regulation of programmed cell death GO:0043068 249 0.100
negative regulation of protein phosphorylation GO:0001933 140 0.098
negative regulation of transferase activity GO:0051348 124 0.098
ribonucleoside triphosphate catabolic process GO:0009203 391 0.095
mitotic cell cycle GO:0000278 326 0.094
secretion GO:0046903 254 0.092
immune effector process GO:0002252 159 0.092
cellular response to endogenous stimulus GO:0071495 336 0.092
Human
cellular ketone metabolic process GO:0042180 80 0.090
positive regulation of phosphorylation GO:0042327 394 0.088
regulation of protein processing GO:0070613 150 0.086
divalent metal ion transport GO:0070838 152 0.086
nucleobase containing compound transport GO:0015931 51 0.086
histone modification GO:0016570 251 0.084
maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000466 2 0.082
regulation of i kappab kinase nf kappab signaling GO:0043122 162 0.082
positive regulation of immune system process GO:0002684 283 0.081
cytoplasmic transport GO:0016482 379 0.080
ribonucleoprotein complex assembly GO:0022618 78 0.079
regulation of establishment of protein localization GO:0070201 242 0.079
cellular response to dna damage stimulus GO:0006974 379 0.078
regulation of anatomical structure size GO:0090066 101 0.075
purine nucleoside triphosphate metabolic process GO:0009144 412 0.075
negative regulation of phosphorylation GO:0042326 174 0.074
regulation of secretion GO:0051046 194 0.074
transmembrane transport GO:0055085 399 0.073
cellular amino acid metabolic process GO:0006520 116 0.072
protein oligomerization GO:0051259 173 0.071
negative regulation of apoptotic process GO:0043066 316 0.070
membrane organization GO:0061024 292 0.070
mitotic nuclear division GO:0007067 119 0.069
regulation of tumor necrosis factor superfamily cytokine production GO:1903555 44 0.067
negative regulation of phosphate metabolic process GO:0045936 267 0.067
regulation of nucleotide catabolic process GO:0030811 205 0.067
positive regulation of mapk cascade GO:0043410 190 0.067
regulation of metal ion transport GO:0010959 120 0.066
mrna processing GO:0006397 133 0.066
positive regulation of apoptotic signaling pathway GO:2001235 70 0.066
membrane fusion GO:0061025 43 0.065
cell type specific apoptotic process GO:0097285 125 0.065
nucleic acid phosphodiester bond hydrolysis GO:0090305 102 0.064
regulation of gtp catabolic process GO:0033124 180 0.063
positive regulation of apoptotic process GO:0043065 246 0.062
purine ribonucleoside metabolic process GO:0046128 437 0.060
amine metabolic process GO:0009308 44 0.060
rrna metabolic process GO:0016072 40 0.059
regulation of kinase activity GO:0043549 314 0.059
regulation of protein localization GO:0032880 296 0.058
response to growth factor GO:0070848 205 0.058
Human
i kappab kinase nf kappab signaling GO:0007249 166 0.057
secretion by cell GO:0032940 226 0.057
regulation of gtpase activity GO:0043087 180 0.057
negative regulation of phosphorus metabolic process GO:0010563 267 0.057
covalent chromatin modification GO:0016569 254 0.056
rna splicing via transesterification reactions GO:0000375 90 0.056
ribonucleoside triphosphate metabolic process GO:0009199 412 0.056
regulation of cellular amine metabolic process GO:0033238 11 0.056
rna transport GO:0050658 39 0.054
gtp metabolic process GO:0046039 239 0.054
negative regulation of protein processing GO:0010955 142 0.054
chromatin modification GO:0016568 298 0.053
adaptive immune response GO:0002250 49 0.053
negative regulation of secretion by cell GO:1903531 52 0.053
regulation of sequence specific dna binding transcription factor activity GO:0051090 211 0.053
synaptic transmission cholinergic GO:0007271 2 0.053
negative regulation of calcium ion transport GO:0051926 19 0.052
purine ribonucleoside triphosphate catabolic process GO:0009207 391 0.052
regulation of extrinsic apoptotic signaling pathway GO:2001236 85 0.052
ncrna processing GO:0034470 83 0.051
rna processing GO:0006396 255 0.051
purine ribonucleoside catabolic process GO:0046130 398 0.051
actin filament based process GO:0030029 224 0.051
interferon gamma production GO:0032609 39 0.050
positive regulation of gtpase activity GO:0043547 166 0.050
gtp catabolic process GO:0006184 237 0.050
negative regulation of ion transport GO:0043271 39 0.050
interleukin 2 secretion GO:0070970 3 0.050
peptidyl serine autophosphorylation GO:0036289 2 0.050
regulation of nucleotide metabolic process GO:0006140 269 0.049
negative regulation of proteolysis GO:0045861 132 0.049
regulation of ion transmembrane transport GO:0034765 132 0.048
mrna splicing via spliceosome GO:0000398 89 0.047
positive regulation of cell cycle GO:0045787 140 0.047
rna splicing via transesterification reactions with bulged adenosine as nucleophile GO:0000377 89 0.047
regulation of reactive oxygen species metabolic process GO:2000377 41 0.047
regulation of apoptotic signaling pathway GO:2001233 175 0.046
regulation of interleukin 2 secretion GO:1900040 2 0.046
organophosphate catabolic process GO:0046434 430 0.045
renal water homeostasis GO:0003091 4 0.044
nucleoside catabolic process GO:0009164 408 0.044
cytokine production GO:0001816 247 0.044
proteolysis involved in cellular protein catabolic process GO:0051603 244 0.044
Human
cell division GO:0051301 168 0.044
positive regulation of gtp catabolic process GO:0033126 166 0.043
negative regulation of secretion GO:0051048 58 0.043
negative regulation of multicellular organismal process GO:0051241 317 0.043
regulation of intracellular transport of viral material GO:1901252 2 0.043
regulation of nucleoside metabolic process GO:0009118 209 0.043
histone ubiquitination GO:0016574 31 0.042
negative regulation of protein kinase activity GO:0006469 98 0.042
regulation of protein stability GO:0031647 87 0.041
biological adhesion GO:0022610 331 0.041
intracellular receptor signaling pathway GO:0030522 104 0.041
regulation of cellular protein catabolic process GO:1903362 96 0.041
positive regulation of synaptic transmission GO:0050806 4 0.041
negative regulation of transcription from rna polymerase ii promoter GO:0000122 281 0.040
nucleoside triphosphate catabolic process GO:0009143 394 0.040
regulation of protein transport GO:0051223 213 0.039
female gamete generation GO:0007292 2 0.039
neuroblast proliferation GO:0007405 4 0.039
activation of immune response GO:0002253 114 0.039
positive regulation of cytokine production GO:0001819 167 0.039
chromatin organization GO:0006325 351 0.038
cellular response to growth factor stimulus GO:0071363 197 0.038
Human
maturation of ssu rrna GO:0030490 3 0.038
purine ribonucleotide catabolic process GO:0009154 404 0.038
guanosine containing compound catabolic process GO:1901069 239 0.037
positive regulation of catabolic process GO:0009896 310 0.037
neuromuscular junction development GO:0007528 3 0.036
nucleic acid transport GO:0050657 39 0.036
regulation of cellular response to stress GO:0080135 244 0.036
Human
cellular component morphogenesis GO:0032989 314 0.036
enzyme linked receptor protein signaling pathway GO:0007167 303 0.035
Human
locomotory behavior GO:0007626 1 0.035
viral process GO:0016032 146 0.035
ion homeostasis GO:0050801 230 0.035
entry into host GO:0044409 25 0.035
negative regulation of extrinsic apoptotic signaling pathway GO:2001237 52 0.035
ribonucleoside catabolic process GO:0042454 406 0.035
positive regulation of purine nucleotide metabolic process GO:1900544 227 0.035
determination of adult lifespan GO:0008340 2 0.035
response to decreased oxygen levels GO:0036293 96 0.035
Human
oogenesis GO:0048477 2 0.035
negative regulation of response to external stimulus GO:0032102 83 0.035
actin cytoskeleton organization GO:0030036 207 0.034
positive regulation of viral entry into host cell GO:0046598 3 0.034
positive regulation of cell proliferation GO:0008284 301 0.034
endosomal transport GO:0016197 129 0.034
nucleocytoplasmic transport GO:0006913 176 0.034
defense response GO:0006952 315 0.034
signal transduction by phosphorylation GO:0023014 297 0.033
rna phosphodiester bond hydrolysis GO:0090501 35 0.033
regulation of secretion by cell GO:1903530 177 0.032
nerve development GO:0021675 4 0.032
regulation of purine nucleotide metabolic process GO:1900542 264 0.032
negative regulation of hepatocyte growth factor receptor signaling pathway GO:1902203 1 0.032
negative regulation of kinase activity GO:0033673 106 0.032
positive regulation of nucleotide catabolic process GO:0030813 185 0.032
glycosyl compound catabolic process GO:1901658 413 0.032
cell morphogenesis GO:0000902 296 0.031
positive regulation of cellular component biogenesis GO:0044089 158 0.031
multi organism metabolic process GO:0044033 41 0.031
monoubiquitinated protein deubiquitination GO:0035520 6 0.031
Human
regulation of protein serine threonine kinase activity GO:0071900 179 0.031
stem cell division GO:0017145 2 0.031
regulation of cellular ketone metabolic process GO:0010565 50 0.031
pattern recognition receptor signaling pathway GO:0002221 48 0.031
response to oxygen levels GO:0070482 100 0.030
Human
protein maturation GO:0051604 233 0.030
nucleotide catabolic process GO:0009166 408 0.030
cell projection organization GO:0030030 252 0.030
response to abiotic stimulus GO:0009628 336 0.030
Human
multi organism cellular process GO:0044764 156 0.030
toll like receptor 2 signaling pathway GO:0034134 4 0.030
purine nucleotide catabolic process GO:0006195 405 0.029
regulation of anatomical structure morphogenesis GO:0022603 286 0.029
negative regulation of protein ubiquitination involved in ubiquitin dependent protein catabolic process GO:2000059 3 0.029
g protein coupled receptor signaling pathway GO:0007186 207 0.029
sulfur compound metabolic process GO:0006790 101 0.029
maturation of lsu rrna GO:0000470 3 0.029
rrna processing GO:0006364 35 0.029
viral release from host cell GO:0019076 21 0.029
innate immune response GO:0045087 178 0.028
activation of innate immune response GO:0002218 55 0.028
protein processing GO:0016485 226 0.028
negative regulation of cellular protein metabolic process GO:0032269 353 0.028
dephosphorylation GO:0016311 209 0.028
internal peptidyl lysine acetylation GO:0018393 97 0.028
embryo development GO:0009790 123 0.028
ribosome biogenesis GO:0042254 48 0.028
nucleoside triphosphate metabolic process GO:0009141 422 0.027
immune response GO:0006955 307 0.027
ribonucleotide catabolic process GO:0009261 405 0.027
positive regulation of cytoskeleton organization GO:0051495 83 0.027
negative regulation of interleukin 2 secretion GO:1900041 2 0.027
maturation of 5 8s rrna GO:0000460 8 0.027
regulation of actin cytoskeleton organization GO:0032956 116 0.027
regulation of multi organism process GO:0043900 157 0.027
nuclear division GO:0000280 128 0.026
cellular response to nitrogen compound GO:1901699 144 0.026
base excision repair GO:0006284 21 0.026
tumor necrosis factor superfamily cytokine production GO:0071706 45 0.026
response to lipid GO:0033993 206 0.026
negative regulation of protein serine threonine kinase activity GO:0071901 57 0.026
peptidyl serine modification GO:0018209 106 0.026
regulation of dephosphorylation GO:0035303 96 0.026
cellular carbohydrate biosynthetic process GO:0034637 21 0.026
metencephalon development GO:0022037 2 0.025
multicellular organismal aging GO:0010259 3 0.025
symbiosis encompassing mutualism through parasitism GO:0044403 156 0.025
sulfur compound biosynthetic process GO:0044272 38 0.025
positive regulation of cellular amino acid metabolic process GO:0045764 3 0.025
cellular response to oxygen containing compound GO:1901701 276 0.025
regulation of body fluid levels GO:0050878 99 0.025
establishment of rna localization GO:0051236 39 0.025
positive regulation of cellular component organization GO:0051130 376 0.024
monovalent inorganic cation homeostasis GO:0055067 37 0.024
epithelium development GO:0060429 227 0.024
response to nitrogen compound GO:1901698 184 0.024
peptidyl threonine phosphorylation GO:0018107 41 0.024
regulation of cytokine production GO:0001817 232 0.024
cellular protein complex assembly GO:0043623 188 0.024
regulation of cytokine secretion GO:0050707 57 0.024
chemical homeostasis GO:0048878 306 0.024
central nervous system development GO:0007417 123 0.023
positive regulation of cellular catabolic process GO:0031331 284 0.023
purine nucleoside catabolic process GO:0006152 398 0.023
positive regulation of immune response GO:0050778 159 0.023
negative regulation of cellular catabolic process GO:0031330 83 0.023
asymmetric stem cell division GO:0098722 1 0.023
blood vessel morphogenesis GO:0048514 162 0.023
regulation of leukocyte migration GO:0002685 63 0.023
regulation of viral process GO:0050792 103 0.023
cellular response to muramyl dipeptide GO:0071225 3 0.023
regulation of system process GO:0044057 101 0.023
negative regulation of intracellular signal transduction GO:1902532 183 0.022
negative regulation of alpha beta t cell activation GO:0046636 3 0.022
positive regulation of cellular amine metabolic process GO:0033240 7 0.022
carbohydrate derivative biosynthetic process GO:1901137 207 0.022
rna localization GO:0006403 41 0.022
ribosomal small subunit biogenesis GO:0042274 13 0.022
negative regulation of protein transport GO:0051224 75 0.022
negative regulation of cell motility GO:2000146 104 0.022
wnt signaling pathway GO:0016055 156 0.021
nucleoside phosphate catabolic process GO:1901292 412 0.021
peptidyl lysine acetylation GO:0018394 101 0.021
regulation of protein catabolic process GO:0042176 155 0.021
regulation of purine nucleotide catabolic process GO:0033121 205 0.021
rna interference GO:0016246 4 0.021
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 156 0.021
Human
negative regulation of calcium ion import GO:0090281 1 0.021
rna 5 end processing GO:0000966 2 0.021
photoreceptor cell differentiation GO:0046530 2 0.021
protein k63 linked ubiquitination GO:0070534 31 0.021
regulation of epithelial cell migration GO:0010632 93 0.021
regulation of proteolysis GO:0030162 293 0.020
regulation of small gtpase mediated signal transduction GO:0051056 156 0.020
positive regulation of vascular endothelial growth factor signaling pathway GO:1900748 3 0.020
regulation of cellular response to hepatocyte growth factor stimulus GO:2001112 1 0.020
negative regulation of apoptotic signaling pathway GO:2001234 97 0.020
viral entry into host cell GO:0046718 24 0.020
monovalent inorganic cation transport GO:0015672 128 0.020
nucleotide binding oligomerization domain containing signaling pathway GO:0070423 4 0.020
immune response regulating signaling pathway GO:0002764 97 0.020
regulation of proteolysis involved in cellular protein catabolic process GO:1903050 91 0.020
cell adhesion GO:0007155 325 0.020
cellular response to hypoxia GO:0071456 51 0.020
Human
positive regulation of organelle organization GO:0010638 195 0.020
dna repair GO:0006281 198 0.020
histone acetylation GO:0016573 93 0.020
regulation of peptidyl serine phosphorylation GO:0033135 50 0.020
regulation of ras protein signal transduction GO:0046578 155 0.020
positive regulation of protein kinase activity GO:0045860 190 0.020
interaction with host GO:0051701 42 0.020
regulation of intracellular transport GO:0032386 195 0.020
negative regulation of intracellular transport of viral material GO:1901253 2 0.020
regulation of cell activation GO:0050865 125 0.020
protein polymerization GO:0051258 71 0.020
visual behavior GO:0007632 2 0.019
anatomical structure homeostasis GO:0060249 100 0.019
leukocyte activation GO:0045321 164 0.019
nucleus organization GO:0006997 28 0.019
internal protein amino acid acetylation GO:0006475 101 0.019
protein kinase c activating g protein coupled receptor signaling pathway GO:0007205 2 0.019
negative regulation of cellular amine metabolic process GO:0033239 3 0.019
astrocyte differentiation GO:0048708 4 0.019
organic hydroxy compound transport GO:0015850 63 0.019
carbohydrate metabolic process GO:0005975 207 0.019
regulation of excretion GO:0044062 1 0.019
hindbrain development GO:0030902 3 0.019
thymus development GO:0048538 3 0.019
basement membrane organization GO:0071711 3 0.019
nucleus localization GO:0051647 1 0.019
regulation of protein deubiquitination GO:0090085 4 0.019
leukocyte differentiation GO:0002521 98 0.018
cytokine secretion GO:0050663 64 0.018
ribonucleoprotein complex subunit organization GO:0071826 81 0.018
negative regulation of immune system process GO:0002683 136 0.018
negative regulation of endopeptidase activity GO:0010951 84 0.018
positive regulation of rig i signaling pathway GO:1900246 4 0.018
cd8 positive alpha beta t cell activation GO:0036037 3 0.018
regulation of cell division GO:0051302 116 0.018
cell cycle phase transition GO:0044770 173 0.018
generation of neurons GO:0048699 152 0.018
cell cycle g1 s phase transition GO:0044843 80 0.018
single organism cellular localization GO:1902580 332 0.018
regulation of dna metabolic process GO:0051052 153 0.018
immune response activating signal transduction GO:0002757 90 0.018
regulation of tumor necrosis factor production GO:0032680 43 0.018
purine containing compound catabolic process GO:0072523 411 0.018
peptidyl threonine modification GO:0018210 45 0.018
negative regulation of cellular component organization GO:0051129 235 0.018
positive regulation of nucleoside metabolic process GO:0045979 186 0.018
regulation of response to biotic stimulus GO:0002831 55 0.018
negative regulation of hydrolase activity GO:0051346 182 0.018
positive regulation of protein complex assembly GO:0031334 86 0.018
positive regulation of ras gtpase activity GO:0032320 117 0.018
positive regulation of cell cycle process GO:0090068 106 0.018
canonical wnt signaling pathway GO:0060070 116 0.018
positive regulation of hydrolase activity GO:0051345 331 0.018
negative regulation of intracellular transport GO:0032387 60 0.018
regulation of adaptive immune response GO:0002819 33 0.017
regulation of cell differentiation GO:0045595 393 0.017
maintenance of location GO:0051235 112 0.017
pathway restricted smad protein phosphorylation GO:0060389 38 0.017
Human
regulation of excitatory postsynaptic membrane potential GO:0060079 1 0.017
forebrain neuron development GO:0021884 2 0.017
regulation of map kinase activity GO:0043405 108 0.017
negative regulation of cell migration GO:0030336 102 0.017
cellular response to biotic stimulus GO:0071216 71 0.017
cranial nerve development GO:0021545 4 0.017
positive regulation of necrotic cell death GO:0010940 4 0.017
positive regulation of protein phosphorylation GO:0001934 313 0.017
plasma membrane organization GO:0007009 115 0.017
positive regulation of kinase activity GO:0033674 204 0.017
circulatory system development GO:0072359 262 0.017
cellular response to oxygen levels GO:0071453 55 0.017
Human
purine ribonucleoside triphosphate metabolic process GO:0009205 411 0.017
regulation of immune response GO:0050776 201 0.017
spermatid differentiation GO:0048515 4 0.016
purine nucleoside triphosphate catabolic process GO:0009146 392 0.016
golgi organization GO:0007030 38 0.016
lipid localization GO:0010876 106 0.016
cell activation GO:0001775 213 0.016
maturation of lsu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna GO:0000463 3 0.016
positive regulation of cell activation GO:0050867 81 0.016
regulation of mitotic cell cycle GO:0007346 189 0.016
negative regulation of protein ubiquitination GO:0031397 35 0.016
negative regulation of cellular protein catabolic process GO:1903363 38 0.016
mitotic cell cycle phase transition GO:0044772 162 0.016
exocytosis GO:0006887 71 0.016
chemotaxis GO:0006935 157 0.016
extrinsic apoptotic signaling pathway GO:0097191 119 0.016
regulation of protein complex assembly GO:0043254 147 0.016
glycerolipid metabolic process GO:0046486 107 0.016
t cell activation GO:0042110 99 0.016
system process GO:0003008 349 0.016
rho protein signal transduction GO:0007266 26 0.016
tissue regeneration GO:0042246 3 0.016
regulation of behavior GO:0050795 82 0.016
oocyte differentiation GO:0009994 2 0.016
cellular lipid metabolic process GO:0044255 303 0.016
cellular response to cytokine stimulus GO:0071345 181 0.016
cellular response to organonitrogen compound GO:0071417 124 0.016
negative regulation of protein catabolic process GO:0042177 59 0.016
regulation of cytoskeleton organization GO:0051493 177 0.016
lipid metabolic process GO:0006629 381 0.016
brain development GO:0007420 97 0.016
negative regulation of sequence specific dna binding transcription factor activity GO:0043433 89 0.016
carbohydrate transport GO:0008643 37 0.016
regulation of innate immune response GO:0045088 97 0.016
regulation of lymphocyte activation GO:0051249 103 0.016
ossification GO:0001503 121 0.015
cation homeostasis GO:0055080 189 0.015
positive regulation of transferase activity GO:0051347 227 0.015
positive regulation of amine transport GO:0051954 2 0.015
cellular response to oxidative stress GO:0034599 85 0.015
peptidyl lysine modification GO:0018205 144 0.015
prostate gland stromal morphogenesis GO:0060741 1 0.015
hemopoiesis GO:0030097 180 0.015
regulation of transporter activity GO:0032409 82 0.015
cellular component disassembly GO:0022411 92 0.015
zymogen activation GO:0031638 70 0.015
regulation of response to external stimulus GO:0032101 222 0.015
reactive oxygen species metabolic process GO:0072593 75 0.015
cell part morphogenesis GO:0032990 137 0.015
protein trimerization GO:0070206 20 0.015
regeneration GO:0031099 4 0.014
organophosphate biosynthetic process GO:0090407 163 0.014
regulation of cellular component biogenesis GO:0044087 281 0.014
positive regulation of purine nucleotide catabolic process GO:0033123 185 0.014
regulation of endopeptidase activity GO:0052548 170 0.014
snrna metabolic process GO:0016073 15 0.014
viral gene expression GO:0019080 35 0.014
vasodilation GO:0042311 4 0.014
regulation of protein ubiquitination involved in ubiquitin dependent protein catabolic process GO:2000058 7 0.014
positive regulation of rho protein signal transduction GO:0035025 4 0.014
regulation of intracellular protein transport GO:0033157 123 0.014
regulation of myeloid cell differentiation GO:0045637 81 0.014
response to muramyl dipeptide GO:0032495 4 0.014
regulation of viral genome replication GO:0045069 48 0.014
regulation of viral release from host cell GO:1902186 20 0.014
neural tube formation GO:0001841 3 0.014
spinal cord development GO:0021510 4 0.014
negative regulation of cytokine production GO:0001818 82 0.014
protein localization to plasma membrane GO:0072659 93 0.014
positive regulation of odontogenesis GO:0042482 3 0.014
peptidyl serine phosphorylation GO:0018105 101 0.014
positive regulation of interleukin 8 production GO:0032757 36 0.014
rhythmic behavior GO:0007622 2 0.014
positive regulation of sequence specific dna binding transcription factor activity GO:0051091 131 0.013
regulation of mitochondrial membrane potential GO:0051881 23 0.013
regulation of gene expression epigenetic GO:0040029 73 0.013
regulation of purine nucleotide biosynthetic process GO:1900371 50 0.013
sensory perception of pain GO:0019233 4 0.013
establishment of protein localization to membrane GO:0090150 121 0.013
regulation of meiotic cell cycle GO:0051445 4 0.013
protein homooligomerization GO:0051260 100 0.013
regulation of skeletal muscle cell proliferation GO:0014857 1 0.013
regulation of hormone levels GO:0010817 125 0.013
regulation of neural precursor cell proliferation GO:2000177 4 0.013
negative regulation of cellular response to growth factor stimulus GO:0090288 41 0.013
protein autophosphorylation GO:0046777 123 0.013
er associated ubiquitin dependent protein catabolic process GO:0030433 31 0.013
Human
viral life cycle GO:0019058 132 0.013
negative regulation of protein deubiquitination GO:0090086 3 0.013
myeloid cell differentiation GO:0030099 117 0.013
negative regulation of cellular component movement GO:0051271 106 0.013
regulation of circadian sleep wake cycle GO:0042749 2 0.013

USP4 disease predictions

Disease DO term ID Size Probability Func Analog Org
central nervous system disease DOID:331 186 0.041
nervous system disease DOID:863 431 0.041
sensory system disease DOID:0050155 203 0.039
eye and adnexa disease DOID:1492 150 0.039
musculoskeletal system disease DOID:17 223 0.032
retinal disease DOID:5679 118 0.023
eye disease DOID:5614 149 0.023
connective tissue disease DOID:65 109 0.015
retinal degeneration DOID:8466 89 0.014