Mus musculus

62 known processes

Clrn1

clarin 1

(Aliases: Ush3a,A130002D11Rik,USH3)

Clrn1 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
detection of mechanical stimulus involved in sensory perception of sound GO:0050910 16 0.711
embryonic organ morphogenesis GO:0048562 276 0.544
sensory organ morphogenesis GO:0090596 242 0.537
sensory perception of mechanical stimulus GO:0050954 107 0.462
detection of mechanical stimulus involved in sensory perception GO:0050974 23 0.454
sensory perception of sound GO:0007605 97 0.376
cellular response to fructose stimulus GO:0071332 2 0.351
sperm capacitation GO:0048240 17 0.325
sensory perception GO:0007600 245 0.320
intracellular ph elevation GO:0051454 3 0.282
auditory receptor cell morphogenesis GO:0002093 15 0.262
ph elevation GO:0045852 3 0.214
transepithelial chloride transport GO:0030321 4 0.209
regulation of cellular ketone metabolic process GO:0010565 66 0.206
potassium ion transmembrane transport GO:0071805 43 0.180
dipeptide transport GO:0042938 2 0.172
positive regulation of dipeptide transmembrane transport GO:2001150 2 0.166
coagulation GO:0050817 78 0.158
cellular homeostasis GO:0019725 240 0.157
regulation of blood pressure GO:0008217 93 0.151
cellular response to monosaccharide stimulus GO:0071326 47 0.131
regulation of protein localization GO:0032880 231 0.125
fluid transport GO:0042044 14 0.125
cellular ion homeostasis GO:0006873 165 0.125
single fertilization GO:0007338 82 0.124
oligopeptide transmembrane transport GO:0035672 4 0.122
blood coagulation GO:0007596 76 0.120
cellular amino acid metabolic process GO:0006520 103 0.107
sulfate transmembrane transport GO:1902358 3 0.105
inner ear receptor cell development GO:0060119 39 0.099
detection of external stimulus GO:0009581 61 0.097
regulation of membrane potential GO:0042391 192 0.093
amine metabolic process GO:0009308 45 0.090
cell adhesion GO:0007155 329 0.088
detection of mechanical stimulus GO:0050982 27 0.085
chondroblast differentiation GO:0060591 2 0.084
anatomical structure homeostasis GO:0060249 145 0.081
positive regulation of cellular amino acid metabolic process GO:0045764 3 0.081
mannitol transport GO:0015797 1 0.078
regulation of renal sodium excretion GO:0035813 3 0.077
ear development GO:0043583 200 0.077
cellular amine metabolic process GO:0044106 44 0.076
pilomotor reflex GO:0097195 3 0.075
detection of abiotic stimulus GO:0009582 60 0.073
positive regulation of cellular amine metabolic process GO:0033240 5 0.072
cellular response to organonitrogen compound GO:0071417 145 0.069
tissue homeostasis GO:0001894 115 0.069
adult locomotory behavior GO:0008344 91 0.068
regulation of transmembrane transport GO:0034762 128 0.068
cellular chemical homeostasis GO:0055082 215 0.068
righting reflex GO:0060013 9 0.065
regulation of oligopeptide transport GO:0090088 2 0.062
single organismal cell cell adhesion GO:0016337 131 0.062
neuromuscular process controlling balance GO:0050885 59 0.062
transmembrane transport GO:0055085 412 0.060
detection of stimulus involved in sensory perception GO:0050906 44 0.059
gland development GO:0048732 330 0.059
regulation of secretion GO:0051046 274 0.058
cartilage development GO:0051216 140 0.057
response to organonitrogen compound GO:0010243 246 0.057
chloride transport GO:0006821 32 0.056
ras protein signal transduction GO:0007265 77 0.055
positive regulation of dipeptide transport GO:2000880 2 0.055
carbohydrate transport GO:0008643 62 0.051
regulation of ossification GO:0030278 112 0.051
adult behavior GO:0030534 135 0.051
regulation of muscle tissue development GO:1901861 97 0.050
visual perception GO:0007601 52 0.048
ion transmembrane transport GO:0034220 361 0.048
ribonucleoside triphosphate catabolic process GO:0009203 199 0.048
circulatory system process GO:0003013 197 0.047
response to monosaccharide GO:0034284 67 0.043
regulation of cell migration GO:0030334 219 0.042
lateral line system development GO:0048925 1 0.042
actin filament organization GO:0007015 113 0.042
cellular response to hexose stimulus GO:0071331 47 0.041
inorganic cation transmembrane transport GO:0098662 207 0.041
cation homeostasis GO:0055080 212 0.039
mitotic cell cycle GO:0000278 195 0.039
organelle assembly GO:0070925 177 0.038
hemostasis GO:0007599 78 0.038
cell maturation GO:0048469 127 0.038
cell substrate adhesion GO:0031589 130 0.038
cilium morphogenesis GO:0060271 102 0.038
regulation of system process GO:0044057 200 0.037
heart contraction GO:0060047 93 0.037
protein localization to organelle GO:0033365 185 0.036
nucleobase containing small molecule metabolic process GO:0055086 352 0.036
positive regulation of cell death GO:0010942 224 0.035
lipid homeostasis GO:0055088 63 0.035
multicellular organismal homeostasis GO:0048871 164 0.035
anion transport GO:0006820 177 0.034
regulation of response to wounding GO:1903034 189 0.034
cellular ketone metabolic process GO:0042180 84 0.033
regulation of cellular amino acid metabolic process GO:0006521 5 0.033
ear morphogenesis GO:0042471 118 0.033
organic hydroxy compound transport GO:0015850 93 0.032
cellular potassium ion transport GO:0071804 43 0.032
cardiac muscle tissue development GO:0048738 130 0.032
photoreceptor cell maintenance GO:0045494 19 0.031
negative regulation of cell migration GO:0030336 59 0.031
regulation of cytoskeleton organization GO:0051493 122 0.031
fertilization GO:0009566 127 0.031
muscle tissue development GO:0060537 308 0.031
cardiac right ventricle formation GO:0003219 3 0.031
somatotropin secreting cell differentiation GO:0060126 4 0.030
regulation of binding of sperm to zona pellucida GO:2000359 3 0.030
retina homeostasis GO:0001895 23 0.030
placenta development GO:0001890 140 0.030
purine nucleoside triphosphate catabolic process GO:0009146 203 0.029
regulation of cell adhesion GO:0030155 154 0.028
response to endoplasmic reticulum stress GO:0034976 53 0.028
cell cell recognition GO:0009988 44 0.028
glycoprotein metabolic process GO:0009100 116 0.028
regulation of cellular amine metabolic process GO:0033238 20 0.028
nucleoside triphosphate metabolic process GO:0009141 230 0.028
epithelial cell development GO:0002064 159 0.028
detection of stimulus GO:0051606 84 0.028
respiratory system development GO:0060541 190 0.027
regulation of hormone levels GO:0010817 211 0.027
purine ribonucleoside metabolic process GO:0046128 241 0.027
reflex GO:0060004 22 0.027
morphogenesis of a polarized epithelium GO:0001738 37 0.026
inorganic anion transmembrane transport GO:0098661 29 0.026
sulfate transport GO:0008272 3 0.026
endocytosis GO:0006897 168 0.025
amide transport GO:0042886 138 0.025
regulation of systemic arterial blood pressure by atrial natriuretic peptide GO:0003050 2 0.025
cellular response to carbohydrate stimulus GO:0071322 50 0.025
camera type eye development GO:0043010 266 0.025
negative regulation of protein metabolic process GO:0051248 282 0.025
hormone secretion GO:0046879 128 0.025
regulation of secretion by cell GO:1903530 249 0.025
spermatid development GO:0007286 108 0.025
connective tissue development GO:0061448 179 0.025
small gtpase mediated signal transduction GO:0007264 97 0.024
nucleoside phosphate metabolic process GO:0006753 338 0.024
bone development GO:0060348 120 0.024
skin development GO:0043588 220 0.024
post embryonic organ development GO:0048569 17 0.024
sensory system development GO:0048880 3 0.024
negative regulation of intracellular signal transduction GO:1902532 167 0.024
cellular response to lipid GO:0071396 145 0.024
regulation of dipeptide transmembrane transport GO:2001148 2 0.023
actin cytoskeleton organization GO:0030036 220 0.023
g protein coupled receptor signaling pathway GO:0007186 243 0.023
digestion GO:0007586 40 0.023
regulation of blood circulation GO:1903522 93 0.022
appendage development GO:0048736 166 0.022
wound healing GO:0042060 157 0.022
organic acid transport GO:0015849 101 0.022
bicarbonate transport GO:0015701 7 0.022
cytokine production GO:0001816 319 0.021
protein maturation GO:0051604 176 0.021
regulation of body fluid levels GO:0050878 162 0.021
protein localization to nucleus GO:0034504 121 0.021
sensory perception of light stimulus GO:0050953 54 0.021
phenol containing compound metabolic process GO:0018958 60 0.021
carbohydrate derivative catabolic process GO:1901136 231 0.021
ossification GO:0001503 216 0.021
male gamete generation GO:0048232 285 0.020
response to radiation GO:0009314 165 0.020
intracellular protein transport GO:0006886 204 0.020
positive regulation of cell development GO:0010720 237 0.020
binding of sperm to zona pellucida GO:0007339 34 0.020
locomotory behavior GO:0007626 195 0.020
positive regulation of muscle cell differentiation GO:0051149 39 0.020
purine ribonucleotide catabolic process GO:0009154 208 0.020
blood circulation GO:0008015 195 0.020
glucose homeostasis GO:0042593 128 0.020
regulation of homeostatic process GO:0032844 182 0.020
body fluid secretion GO:0007589 53 0.020
organonitrogen compound biosynthetic process GO:1901566 192 0.019
positive regulation of programmed cell death GO:0043068 218 0.019
membrane hyperpolarization GO:0060081 21 0.019
regulation of protein transport GO:0051223 163 0.019
ribonucleotide catabolic process GO:0009261 208 0.019
respiratory tube development GO:0030323 167 0.019
oxalate transport GO:0019532 3 0.019
vestibular receptor cell development GO:0060118 2 0.019
purine ribonucleotide metabolic process GO:0009150 290 0.019
homeostasis of number of cells GO:0048872 210 0.019
regulation of peptide transport GO:0090087 91 0.018
regulation of heart contraction GO:0008016 77 0.018
platelet activation GO:0030168 40 0.018
central nervous system neuron differentiation GO:0021953 162 0.018
sterol homeostasis GO:0055092 45 0.018
spermatogenesis GO:0007283 284 0.018
purine ribonucleoside catabolic process GO:0046130 205 0.018
peptide transport GO:0015833 133 0.017
aromatic compound catabolic process GO:0019439 286 0.017
nucleoside metabolic process GO:0009116 246 0.017
nucleotide metabolic process GO:0009117 332 0.017
cholesterol homeostasis GO:0042632 44 0.017
response to fructose GO:0009750 2 0.017
proteoglycan metabolic process GO:0006029 38 0.017
glycosyl compound metabolic process GO:1901657 246 0.017
nucleoside monophosphate catabolic process GO:0009125 59 0.017
negative regulation of cell proliferation GO:0008285 296 0.017
single organism cell adhesion GO:0098602 156 0.017
negative regulation of phosphate metabolic process GO:0045936 184 0.017
purine ribonucleoside triphosphate metabolic process GO:0009205 220 0.017
ribonucleoside catabolic process GO:0042454 206 0.016
ribose phosphate metabolic process GO:0019693 291 0.016
response to organic cyclic compound GO:0014070 198 0.016
cardiac chamber development GO:0003205 108 0.016
response to transforming growth factor beta GO:0071559 88 0.016
hexose metabolic process GO:0019318 98 0.016
negative regulation of cell motility GO:2000146 61 0.016
cation transport GO:0006812 399 0.016
skeletal system development GO:0001501 356 0.016
regulation of anatomical structure size GO:0090066 178 0.016
potassium ion transport GO:0006813 52 0.016
sclerotome development GO:0061056 4 0.016
equilibrioception GO:0050957 3 0.016
renal system process GO:0003014 48 0.016
regulation of multi organism process GO:0043900 111 0.016
regulation of hydrolase activity GO:0051336 246 0.016
rna processing GO:0006396 105 0.016
mitral valve development GO:0003174 4 0.015
face development GO:0060324 38 0.015
inorganic ion transmembrane transport GO:0098660 234 0.015
intestinal epithelial structure maintenance GO:0060729 4 0.015
purine containing compound metabolic process GO:0072521 311 0.015
protein catabolic process GO:0030163 221 0.015
purine nucleoside metabolic process GO:0042278 241 0.015
sperm egg recognition GO:0035036 37 0.015
heterocycle catabolic process GO:0046700 280 0.015
regulation of cytokine production GO:0001817 266 0.015
cellular metal ion homeostasis GO:0006875 151 0.015
divalent inorganic cation transport GO:0072511 178 0.015
regulation of cell motility GO:2000145 236 0.015
cellular nitrogen compound catabolic process GO:0044270 280 0.015
auditory receptor cell stereocilium organization GO:0060088 12 0.015
protein modification by small protein conjugation GO:0032446 187 0.015
deltoid tuberosity development GO:0035993 3 0.015
dephosphorylation GO:0016311 129 0.015
regulation of organelle organization GO:0033043 289 0.015
organonitrogen compound catabolic process GO:1901565 264 0.015
cellular response to lipopolysaccharide GO:0071222 77 0.015
pancreatic a cell fate commitment GO:0003326 2 0.014
macromolecule catabolic process GO:0009057 281 0.014
regulation of leukocyte differentiation GO:1902105 159 0.014
regulation of ph GO:0006885 26 0.014
regulation of circadian sleep wake cycle rem sleep GO:0042320 1 0.014
cellular macromolecule catabolic process GO:0044265 206 0.014
thyroid hormone metabolic process GO:0042403 16 0.014
neural retina development GO:0003407 41 0.014
lipid biosynthetic process GO:0008610 179 0.014
myeloid leukocyte differentiation GO:0002573 119 0.014
regulation of cell size GO:0008361 72 0.014
regulation of dipeptide transport GO:0090089 2 0.014
myotube differentiation GO:0014902 105 0.014
tissue remodeling GO:0048771 102 0.014
ribonucleoside triphosphate metabolic process GO:0009199 220 0.014
mitochondrion distribution GO:0048311 4 0.014
cardiac ventricle morphogenesis GO:0003208 50 0.013
inner cell mass cell fate commitment GO:0001827 2 0.013
membrane organization GO:0061024 245 0.013
monovalent inorganic cation homeostasis GO:0055067 33 0.013
regulation of ras protein signal transduction GO:0046578 114 0.013
ribonucleoside metabolic process GO:0009119 245 0.013
organic anion transport GO:0015711 137 0.013
regulation of vesicle mediated transport GO:0060627 139 0.013
divalent metal ion transport GO:0070838 172 0.013
chromatin organization GO:0006325 206 0.013
positive regulation of oligopeptide transport GO:2000878 2 0.013
endocardial cushion to mesenchymal transition involved in heart valve formation GO:0003199 4 0.013
protein processing GO:0016485 163 0.013
multicellular organismal signaling GO:0035637 91 0.013
peptide secretion GO:0002790 114 0.013
appendage morphogenesis GO:0035107 149 0.013
renal sodium excretion GO:0035812 3 0.013
organic cyclic compound catabolic process GO:1901361 295 0.013
protein modification by small protein conjugation or removal GO:0070647 207 0.013
regulation of establishment of protein localization GO:0070201 181 0.013
posttranscriptional regulation of gene expression GO:0010608 155 0.013
purine containing compound catabolic process GO:0072523 213 0.013
reactive oxygen species metabolic process GO:0072593 84 0.013
regulation of transferase activity GO:0051338 263 0.013
cellular component assembly involved in morphogenesis GO:0010927 139 0.013
bone morphogenesis GO:0060349 78 0.013
establishment or maintenance of bipolar cell polarity GO:0061245 21 0.012
cation transmembrane transport GO:0098655 266 0.012
nucleotide catabolic process GO:0009166 217 0.012
cognition GO:0050890 149 0.012
limb morphogenesis GO:0035108 149 0.012
excretion GO:0007588 22 0.012
carbohydrate derivative biosynthetic process GO:1901137 183 0.012
lens development in camera type eye GO:0002088 62 0.012
cytoplasmic transport GO:0016482 234 0.012
regulation of mapk cascade GO:0043408 248 0.012
response to acid chemical GO:0001101 111 0.012
regulation of cell cycle GO:0051726 281 0.012
rna splicing via transesterification reactions GO:0000375 43 0.012
retinal cone cell development GO:0046549 8 0.012
regulation of cell projection organization GO:0031344 206 0.012
cellular response to biotic stimulus GO:0071216 92 0.012
chondrocyte hypertrophy GO:0003415 4 0.012
translation GO:0006412 93 0.012
harderian gland development GO:0070384 2 0.012
synaptic transmission GO:0007268 329 0.012
sensory perception of chemical stimulus GO:0007606 51 0.012
inorganic anion transport GO:0015698 43 0.012
myeloid cell differentiation GO:0030099 233 0.012
regulation of cellular carbohydrate metabolic process GO:0010675 75 0.012
metal ion homeostasis GO:0055065 189 0.012
single organism nuclear import GO:1902593 95 0.012
nucleoside triphosphate catabolic process GO:0009143 205 0.012
regulation of circadian rhythm GO:0042752 58 0.012
polyol transport GO:0015791 4 0.012
forebrain development GO:0030900 302 0.012
negative regulation of hydrolase activity GO:0051346 71 0.012
leukocyte differentiation GO:0002521 342 0.012
response to lipopolysaccharide GO:0032496 128 0.011
visceral serous pericardium development GO:0061032 2 0.011
intestinal absorption GO:0050892 13 0.011
positive regulation of secretion by cell GO:1903532 114 0.011
positive regulation of endocardial cushion to mesenchymal transition involved in heart valve formation GO:2000802 1 0.011
negative regulation of growth GO:0045926 99 0.011
liver development GO:0001889 66 0.011
cellular response to growth factor stimulus GO:0071363 197 0.011
regulation of muscle system process GO:0090257 80 0.011
response to purine containing compound GO:0014074 28 0.011
extracellular structure organization GO:0043062 148 0.011
cellular response to external stimulus GO:0071496 88 0.011
protein secretion GO:0009306 111 0.011
nuclear import GO:0051170 95 0.011
establishment of planar polarity GO:0001736 28 0.011
organic hydroxy compound metabolic process GO:1901615 203 0.011
cellular calcium ion homeostasis GO:0006874 119 0.011
nucleoside phosphate catabolic process GO:1901292 222 0.011
mrna processing GO:0006397 63 0.011
biomineral tissue development GO:0031214 64 0.011
lateral geniculate nucleus development GO:0021771 1 0.011
cellular response to abiotic stimulus GO:0071214 56 0.011
glycosyl compound catabolic process GO:1901658 206 0.011
response to growth factor GO:0070848 198 0.011
mrna metabolic process GO:0016071 84 0.011
regulation of myeloid cell differentiation GO:0045637 96 0.011
purine nucleoside catabolic process GO:0006152 205 0.011
lactation GO:0007595 25 0.011
mitral valve morphogenesis GO:0003183 4 0.011
regulation of systemic arterial blood pressure mediated by a chemical signal GO:0003044 33 0.011
regulation of insulin secretion involved in cellular response to glucose stimulus GO:0061178 31 0.010
inner ear receptor cell differentiation GO:0060113 61 0.010
response to cold GO:0009409 19 0.010
spinal cord development GO:0021510 81 0.010
positive regulation of dopamine secretion GO:0033603 2 0.010
cell division GO:0051301 120 0.010
negative regulation of molecular function GO:0044092 258 0.010
muscle cell development GO:0055001 133 0.010
response to inorganic substance GO:0010035 96 0.010
positive regulation of protein modification process GO:0031401 299 0.010
nucleoside catabolic process GO:0009164 206 0.010
neural precursor cell proliferation GO:0061351 121 0.010
nitrogen compound transport GO:0071705 271 0.010
regulation of organ growth GO:0046620 61 0.010
regulation of cell activation GO:0050865 289 0.010
positive regulation of cell adhesion GO:0045785 80 0.010
regulation of feeding behavior GO:0060259 3 0.010
acetylcholine secretion neurotransmission GO:0014055 2 0.010
peptidyl lysine modification GO:0018205 77 0.010

Clrn1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in mouse and predicted with the mouse functional network.

Disease DO term ID Size Probability Func Analog Org
auditory system disease DOID:2742 0 0.884
nonsyndromic deafness DOID:0050563 0 0.884
sensory system disease DOID:0050155 0 0.884
disease of anatomical entity DOID:7 0 0.884
nervous system disease DOID:863 0 0.884
autosomal recessive nonsyndromic deafness DOID:0050565 0 0.578
autosomal dominant nonsyndromic deafness DOID:0050564 0 0.064
usher syndrome DOID:0050439 0 0.054
musculoskeletal system disease DOID:17 0 0.027