Mus musculus

95 known processes

Rlim

ring finger protein, LIM domain interacting

(Aliases: AL022832,AW743871,Ha1r,Rnf12)

Rlim biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
regulation of organelle organization GO:0033043 289 0.115
protein ubiquitination GO:0016567 171 0.079
dna metabolic process GO:0006259 303 0.063
purine nucleoside metabolic process GO:0042278 241 0.062
ribonucleoside triphosphate metabolic process GO:0009199 220 0.061
regulation of cellular amine metabolic process GO:0033238 20 0.059
organelle fission GO:0048285 170 0.057
microtubule cytoskeleton organization GO:0000226 157 0.053
aromatic compound catabolic process GO:0019439 286 0.050
protein modification by small protein conjugation GO:0032446 187 0.050
cellular amino acid metabolic process GO:0006520 103 0.050
amine metabolic process GO:0009308 45 0.047
organonitrogen compound catabolic process GO:1901565 264 0.047
regulation of hydrolase activity GO:0051336 246 0.047
meiotic nuclear division GO:0007126 115 0.046
cellular macromolecule catabolic process GO:0044265 206 0.044
regulation of cell cycle GO:0051726 281 0.044
positive regulation of programmed cell death GO:0043068 218 0.044
purine ribonucleotide metabolic process GO:0009150 290 0.043
purine nucleotide metabolic process GO:0006163 302 0.043
immune effector process GO:0002252 321 0.043
chromatin organization GO:0006325 206 0.042
regulation of cellular ketone metabolic process GO:0010565 66 0.041
positive regulation of cell death GO:0010942 224 0.041
ubiquitin dependent protein catabolic process GO:0006511 129 0.040
modification dependent protein catabolic process GO:0019941 133 0.040
cellular amine metabolic process GO:0044106 44 0.040
protein modification by small protein conjugation or removal GO:0070647 207 0.039
regulation of apoptotic signaling pathway GO:2001233 197 0.039
regulation of cellular amino acid metabolic process GO:0006521 5 0.039
negative regulation of molecular function GO:0044092 258 0.038
protein catabolic process GO:0030163 221 0.038
macromolecule catabolic process GO:0009057 281 0.037
nucleotide metabolic process GO:0009117 332 0.037
purine nucleoside triphosphate metabolic process GO:0009144 226 0.037
methylation GO:0032259 134 0.037
negative regulation of protein metabolic process GO:0051248 282 0.036
ribonucleotide metabolic process GO:0009259 291 0.036
purine ribonucleoside triphosphate metabolic process GO:0009205 220 0.035
nucleoside phosphate metabolic process GO:0006753 338 0.035
nucleoside metabolic process GO:0009116 246 0.034
cation transport GO:0006812 399 0.034
regulation of protein localization GO:0032880 231 0.033
ribonucleoside metabolic process GO:0009119 245 0.033
modification dependent macromolecule catabolic process GO:0043632 133 0.032
stem cell development GO:0048864 219 0.032
regulation of cytoskeleton organization GO:0051493 122 0.031
nucleoside triphosphate catabolic process GO:0009143 205 0.031
peptidyl amino acid modification GO:0018193 336 0.031
meiotic cell cycle GO:0051321 122 0.031
purine containing compound metabolic process GO:0072521 311 0.031
purine ribonucleoside metabolic process GO:0046128 241 0.030
regulation of purine nucleotide metabolic process GO:1900542 169 0.030
oocyte axis specification GO:0007309 2 0.030
regulation of kinase activity GO:0043549 249 0.030
cellular protein catabolic process GO:0044257 155 0.030
cellular ketone metabolic process GO:0042180 84 0.030
endocytosis GO:0006897 168 0.029
regulation of cellular response to stress GO:0080135 159 0.029
positive regulation of apoptotic process GO:0043065 217 0.029
positive regulation of hydrolase activity GO:0051345 148 0.029
nucleobase containing small molecule metabolic process GO:0055086 352 0.029
positive regulation of cellular amino acid metabolic process GO:0045764 3 0.028
cell type specific apoptotic process GO:0097285 268 0.028
posttranscriptional regulation of gene expression GO:0010608 155 0.028
regulation of cell activation GO:0050865 289 0.028
maintenance of location GO:0051235 89 0.028
ribose phosphate metabolic process GO:0019693 291 0.028
negative regulation of cellular protein metabolic process GO:0032269 247 0.027
rna processing GO:0006396 105 0.027
carbohydrate derivative biosynthetic process GO:1901137 183 0.027
apoptotic signaling pathway GO:0097190 306 0.027
organelle assembly GO:0070925 177 0.027
stem cell differentiation GO:0048863 268 0.027
translation GO:0006412 93 0.027
proteolysis involved in cellular protein catabolic process GO:0051603 147 0.027
regulation of intracellular transport GO:0032386 159 0.026
protein localization to organelle GO:0033365 185 0.026
skeletal system development GO:0001501 356 0.026
forebrain development GO:0030900 302 0.026
regulation of protein complex assembly GO:0043254 83 0.026
regulation of cell cycle process GO:0010564 160 0.026
regulation of cellular catabolic process GO:0031329 242 0.025
heterocycle catabolic process GO:0046700 280 0.025
rho protein signal transduction GO:0007266 32 0.025
divalent inorganic cation homeostasis GO:0072507 138 0.025
purine nucleoside triphosphate catabolic process GO:0009146 203 0.025
negative regulation of cell proliferation GO:0008285 296 0.025
positive regulation of kinase activity GO:0033674 155 0.025
regulation of lymphocyte activation GO:0051249 240 0.024
ras protein signal transduction GO:0007265 77 0.024
extrinsic apoptotic signaling pathway GO:0097191 126 0.024
microtubule based process GO:0007017 236 0.024
intrinsic apoptotic signaling pathway GO:0097193 132 0.024
cellular nitrogen compound catabolic process GO:0044270 280 0.024
nucleoside phosphate catabolic process GO:1901292 222 0.024
inflammatory response GO:0006954 244 0.023
ribonucleotide catabolic process GO:0009261 208 0.023
regulation of cell migration GO:0030334 219 0.023
leukocyte activation involved in immune response GO:0002366 126 0.023
negative regulation of immune system process GO:0002683 209 0.023
regulation of nucleoside metabolic process GO:0009118 130 0.023
t cell activation GO:0042110 289 0.022
regulation of nucleotide metabolic process GO:0006140 169 0.022
positive regulation of protein modification process GO:0031401 299 0.022
activation of adenylate cyclase activity GO:0007190 4 0.022
cation transmembrane transport GO:0098655 266 0.022
negative regulation of lymphocyte activation GO:0051250 91 0.022
nucleoside catabolic process GO:0009164 206 0.021
positive regulation of nervous system development GO:0051962 221 0.021
gland development GO:0048732 330 0.021
leukocyte differentiation GO:0002521 342 0.021
purine nucleoside catabolic process GO:0006152 205 0.021
positive regulation of cellular amine metabolic process GO:0033240 5 0.021
development of primary sexual characteristics GO:0045137 143 0.021
wnt signaling pathway GO:0016055 188 0.021
sensory perception GO:0007600 245 0.021
negative regulation of hydrolase activity GO:0051346 71 0.021
cellular response to dna damage stimulus GO:0006974 207 0.021
meiotic cell cycle process GO:1903046 77 0.021
chromatin modification GO:0016568 187 0.020
digestive system development GO:0055123 200 0.020
camera type eye development GO:0043010 266 0.020
negative regulation of cell activation GO:0050866 111 0.020
organophosphate catabolic process GO:0046434 232 0.020
developmental maturation GO:0021700 193 0.020
cellular homeostasis GO:0019725 240 0.020
negative regulation of intracellular signal transduction GO:1902532 167 0.020
actin cytoskeleton organization GO:0030036 220 0.020
mitotic cell cycle GO:0000278 195 0.020
regulation of ossification GO:0030278 112 0.020
transmembrane transport GO:0055085 412 0.020
cytoplasmic transport GO:0016482 234 0.020
regulation of t cell activation GO:0050863 170 0.020
dephosphorylation GO:0016311 129 0.020
purine ribonucleoside triphosphate catabolic process GO:0009207 199 0.020
cellular chemical homeostasis GO:0055082 215 0.020
intracellular protein transport GO:0006886 204 0.020
regulation of proteolysis GO:0030162 164 0.020
ion transmembrane transport GO:0034220 361 0.020
germ cell development GO:0007281 185 0.020
male gamete generation GO:0048232 285 0.019
positive regulation of apoptotic signaling pathway GO:2001235 95 0.019
negative regulation of phosphorus metabolic process GO:0010563 184 0.019
regulation of wnt signaling pathway GO:0030111 123 0.019
innate immune response GO:0045087 157 0.019
cellular ion homeostasis GO:0006873 165 0.019
regulation of response to wounding GO:1903034 189 0.019
cation homeostasis GO:0055080 212 0.019
ribonucleoside monophosphate metabolic process GO:0009161 80 0.019
regulation of cell motility GO:2000145 236 0.019
positive regulation of purine nucleotide metabolic process GO:1900544 114 0.019
nuclear division GO:0000280 158 0.019
cell adhesion GO:0007155 329 0.019
cellular divalent inorganic cation homeostasis GO:0072503 127 0.019
regulation of mapk cascade GO:0043408 248 0.018
cell activation involved in immune response GO:0002263 126 0.018
carbohydrate derivative catabolic process GO:1901136 231 0.018
wound healing GO:0042060 157 0.018
regulation of neuron differentiation GO:0045664 281 0.018
pigmentation GO:0043473 71 0.018
positive regulation of cellular catabolic process GO:0031331 148 0.018
organonitrogen compound biosynthetic process GO:1901566 192 0.018
action potential GO:0001508 78 0.018
morphogenesis of a branching structure GO:0001763 203 0.018
regulation of body fluid levels GO:0050878 162 0.018
myosin filament organization GO:0031033 3 0.018
rna splicing GO:0008380 54 0.018
metal ion homeostasis GO:0055065 189 0.018
regulation of establishment of protein localization GO:0070201 181 0.018
cell maturation GO:0048469 127 0.018
canonical wnt signaling pathway GO:0060070 130 0.018
establishment or maintenance of cell polarity GO:0007163 86 0.018
regulation of transferase activity GO:0051338 263 0.018
leukocyte mediated immunity GO:0002443 174 0.018
cellular lipid metabolic process GO:0044255 323 0.018
dendrite development GO:0016358 115 0.018
myeloid cell differentiation GO:0030099 233 0.017
b cell activation GO:0042113 161 0.017
glycosyl compound catabolic process GO:1901658 206 0.017
small gtpase mediated signal transduction GO:0007264 97 0.017
regulation of protein kinase activity GO:0045859 232 0.017
nucleoside monophosphate metabolic process GO:0009123 85 0.017
histone modification GO:0016570 159 0.017
purine ribonucleoside catabolic process GO:0046130 205 0.017
angiogenesis GO:0001525 201 0.017
covalent chromatin modification GO:0016569 163 0.017
regulation of cell projection organization GO:0031344 206 0.017
cellular metal ion homeostasis GO:0006875 151 0.017
negative regulation of cellular component organization GO:0051129 194 0.017
nucleoside triphosphate metabolic process GO:0009141 230 0.017
spermatid differentiation GO:0048515 115 0.017
membrane organization GO:0061024 245 0.017
regulation of protein catabolic process GO:0042176 108 0.016
epithelial tube morphogenesis GO:0060562 303 0.016
nucleotide catabolic process GO:0009166 217 0.016
purine containing compound catabolic process GO:0072523 213 0.016
positive regulation of protein kinase activity GO:0045860 144 0.016
negative regulation of phosphorylation GO:0042326 166 0.016
organophosphate biosynthetic process GO:0090407 122 0.016
tissue homeostasis GO:0001894 115 0.016
cell division GO:0051301 120 0.016
ribonucleoside triphosphate catabolic process GO:0009203 199 0.016
divalent inorganic cation transport GO:0072511 178 0.015
cellular response to cytokine stimulus GO:0071345 189 0.015
mapk cascade GO:0000165 281 0.015
rhythmic process GO:0048511 174 0.015
digestive tract development GO:0048565 190 0.015
organic hydroxy compound metabolic process GO:1901615 203 0.015
lymphocyte differentiation GO:0030098 242 0.015
inorganic cation transmembrane transport GO:0098662 207 0.015
regulation of cellular component size GO:0032535 121 0.015
osteoclast differentiation GO:0030316 62 0.015
positive regulation of proteolysis GO:0045862 85 0.015
response to organic cyclic compound GO:0014070 198 0.015
spermatogenesis GO:0007283 284 0.015
ribonucleoside catabolic process GO:0042454 206 0.015
regulation of synaptic growth at neuromuscular junction GO:0008582 4 0.015
purine nucleotide catabolic process GO:0006195 211 0.015
lipid transport GO:0006869 98 0.015
asymmetric stem cell division GO:0098722 3 0.015
regulation of cellular component biogenesis GO:0044087 181 0.015
ossification GO:0001503 216 0.014
b cell differentiation GO:0030183 78 0.014
retina development in camera type eye GO:0060041 119 0.014
sulfur compound metabolic process GO:0006790 100 0.014
glycosyl compound metabolic process GO:1901657 246 0.014
chromosome segregation GO:0007059 48 0.014
protein maturation GO:0051604 176 0.014
negative regulation of phosphate metabolic process GO:0045936 184 0.014
regulation of ion transport GO:0043269 215 0.014
reactive oxygen species metabolic process GO:0072593 84 0.014
negative regulation of t cell activation GO:0050868 65 0.014
myosin filament assembly GO:0031034 2 0.014
establishment of organelle localization GO:0051656 122 0.014
regulation of cytokine production GO:0001817 266 0.014
organelle localization GO:0051640 179 0.014
neuron death GO:0070997 154 0.014
hematopoietic progenitor cell differentiation GO:0002244 143 0.014
respiratory system development GO:0060541 190 0.014
homeostasis of number of cells GO:0048872 210 0.014
cellular response to lipid GO:0071396 145 0.014
peptidyl lysine modification GO:0018205 77 0.013
glycoprotein metabolic process GO:0009100 116 0.013
appendage development GO:0048736 166 0.013
appendage morphogenesis GO:0035107 149 0.013
nitrogen compound transport GO:0071705 271 0.013
morphogenesis of a branching epithelium GO:0061138 193 0.013
regulation of system process GO:0044057 200 0.013
positive regulation of organelle organization GO:0010638 128 0.013
respiratory tube development GO:0030323 167 0.013
calcium ion homeostasis GO:0055074 127 0.013
carbohydrate metabolic process GO:0005975 230 0.013
establishment of protein localization to organelle GO:0072594 118 0.013
regulation of homeostatic process GO:0032844 182 0.013
sequestering of calcium ion GO:0051208 18 0.013
regulation of endopeptidase activity GO:0052548 89 0.013
purine ribonucleotide catabolic process GO:0009154 208 0.013
g protein coupled receptor signaling pathway GO:0007186 243 0.013
anatomical structure homeostasis GO:0060249 145 0.013
positive regulation of protein phosphorylation GO:0001934 242 0.013
skeletal system morphogenesis GO:0048705 203 0.013
regulation of leukocyte differentiation GO:1902105 159 0.013
protein oligomerization GO:0051259 67 0.013
multicellular organism growth GO:0035264 161 0.013
epithelial cell development GO:0002064 159 0.012
cellular response to oxidative stress GO:0034599 76 0.012
inorganic ion transmembrane transport GO:0098660 234 0.012
branching morphogenesis of an epithelial tube GO:0048754 159 0.012
transmission of nerve impulse GO:0019226 76 0.012
protein localization to nucleus GO:0034504 121 0.012
leukocyte proliferation GO:0070661 172 0.012
organic cyclic compound catabolic process GO:1901361 295 0.012
divalent metal ion transport GO:0070838 172 0.012
actin filament organization GO:0007015 113 0.012
multicellular organismal signaling GO:0035637 91 0.012
urogenital system development GO:0001655 261 0.012
fat cell differentiation GO:0045444 160 0.012
mitotic nuclear division GO:0007067 48 0.012
cellular response to abiotic stimulus GO:0071214 56 0.012
cellularization GO:0007349 1 0.012
cellular calcium ion homeostasis GO:0006874 119 0.012
regulation of protein transport GO:0051223 163 0.012
regulation of chromatin organization GO:1902275 57 0.012
embryonic epithelial tube formation GO:0001838 130 0.012
small molecule biosynthetic process GO:0044283 132 0.012
epithelial tube formation GO:0072175 130 0.012
negative regulation of protein modification process GO:0031400 163 0.012
peptidyl tyrosine modification GO:0018212 145 0.012
sensory perception of mechanical stimulus GO:0050954 107 0.012
regulation of membrane potential GO:0042391 192 0.011
actin mediated cell contraction GO:0070252 15 0.011
digestive tract morphogenesis GO:0048546 147 0.011
placenta development GO:0001890 140 0.011
positive regulation of cellular component biogenesis GO:0044089 94 0.011
glycerolipid metabolic process GO:0046486 122 0.011
positive regulation of transferase activity GO:0051347 167 0.011
leukocyte homeostasis GO:0001776 79 0.011
developmental growth involved in morphogenesis GO:0060560 138 0.011
cytokine mediated signaling pathway GO:0019221 115 0.011
positive regulation of cell development GO:0010720 237 0.011
regulation of cell adhesion GO:0030155 154 0.011
striated muscle myosin thick filament assembly GO:0071688 1 0.011
regulation of cell division GO:0051302 76 0.011
columnar cuboidal epithelial cell differentiation GO:0002065 82 0.011
negative regulation of neuron apoptotic process GO:0043524 92 0.011
cellular component assembly involved in morphogenesis GO:0010927 139 0.011
neural tube development GO:0021915 160 0.011
response to acid chemical GO:0001101 111 0.011
neural tube formation GO:0001841 108 0.011
regulation of intrinsic apoptotic signaling pathway GO:2001242 61 0.011
sequestering of metal ion GO:0051238 19 0.011
circulatory system process GO:0003013 197 0.011
blood vessel morphogenesis GO:0048514 285 0.011
neuronal action potential GO:0019228 54 0.011
purine nucleoside monophosphate metabolic process GO:0009126 81 0.011
nuclear import GO:0051170 95 0.011
protein targeting GO:0006605 143 0.011
cell growth GO:0016049 130 0.011
locomotory behavior GO:0007626 195 0.011
blood circulation GO:0008015 195 0.011
stem cell proliferation GO:0072089 117 0.011
circadian rhythm GO:0007623 114 0.011
nucleoside monophosphate catabolic process GO:0009125 59 0.011
positive regulation of nucleotide metabolic process GO:0045981 114 0.011
lymphocyte activation involved in immune response GO:0002285 93 0.011
morphogenesis of embryonic epithelium GO:0016331 159 0.011
regulation of chromatin modification GO:1903308 57 0.011
skin development GO:0043588 220 0.011
protein processing GO:0016485 163 0.011
multi multicellular organism process GO:0044706 109 0.011
regulation of secretion by cell GO:1903530 249 0.011
circadian regulation of gene expression GO:0032922 48 0.010
proteasome mediated ubiquitin dependent protein catabolic process GO:0043161 88 0.010
embryonic limb morphogenesis GO:0030326 126 0.010
organic anion transport GO:0015711 137 0.010
inter male aggressive behavior GO:0002121 3 0.010
regulation of nucleotide catabolic process GO:0030811 122 0.010
developmental pigmentation GO:0048066 40 0.010
maternal determination of anterior posterior axis embryo GO:0008358 2 0.010
heart morphogenesis GO:0003007 178 0.010
mesenchyme development GO:0060485 152 0.010
t cell proliferation GO:0042098 120 0.010
bone development GO:0060348 120 0.010
ear development GO:0043583 200 0.010
actin filament based movement GO:0030048 23 0.010
detection of abiotic stimulus GO:0009582 60 0.010

Rlim disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in mouse and predicted with the mouse functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.024
nervous system disease DOID:863 0 0.024
cancer DOID:162 0 0.023
disease of cellular proliferation DOID:14566 0 0.023
organ system cancer DOID:0050686 0 0.023
musculoskeletal system disease DOID:17 0 0.011