Rattus norvegicus

8 known processes

Xpc

xeroderma pigmentosum, complementation group C

Xpc biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
organic acid metabolic process GO:0006082 292 0.066
carboxylic acid metabolic process GO:0019752 289 0.063
oxoacid metabolic process GO:0043436 290 0.058
cellular amino acid metabolic process GO:0006520 107 0.056
protein phosphorylation GO:0006468 345 0.050
rna metabolic process GO:0016070 406 0.048
regulation of transcription dna templated GO:0006355 374 0.047
carbohydrate derivative metabolic process GO:1901135 346 0.042
negative regulation of metabolic process GO:0009892 331 0.042
cellular response to endogenous stimulus GO:0071495 377 0.041
nucleic acid templated transcription GO:0097659 379 0.037
cellular component assembly GO:0022607 360 0.037
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.036
cellular component biogenesis GO:0044085 368 0.035
catabolic process GO:0009056 351 0.035
regulation of phosphorus metabolic process GO:0051174 349 0.035
organophosphate metabolic process GO:0019637 370 0.034
response to decreased oxygen levels GO:0036293 237 0.033
regulation of nucleic acid templated transcription GO:1903506 380 0.032
lipid metabolic process GO:0006629 283 0.032
negative regulation of cellular metabolic process GO:0031324 281 0.031
single organism catabolic process GO:0044712 283 0.031
regulation of cellular protein metabolic process GO:0032268 267 0.031
homeostatic process GO:0042592 331 0.030
neuron differentiation GO:0030182 368 0.030
regulation of cellular ketone metabolic process GO:0010565 27 0.029
regulation of phosphate metabolic process GO:0019220 349 0.029
regulation of molecular function GO:0065009 398 0.029
positive regulation of biosynthetic process GO:0009891 319 0.029
regulation of catalytic activity GO:0050790 304 0.029
negative regulation of macromolecule metabolic process GO:0010605 260 0.029
amine metabolic process GO:0009308 38 0.028
positive regulation of phosphorus metabolic process GO:0010562 262 0.028
regulation of cellular component organization GO:0051128 368 0.028
protein oligomerization GO:0051259 191 0.028
regulation of cellular amino acid metabolic process GO:0006521 2 0.028
cellular ketone metabolic process GO:0042180 51 0.028
positive regulation of cellular biosynthetic process GO:0031328 295 0.028
response to inorganic substance GO:0010035 377 0.028
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.028
transcription dna templated GO:0006351 377 0.028
cellular response to oxygen containing compound GO:1901701 386 0.027
single organism biosynthetic process GO:0044711 342 0.027
nucleobase containing small molecule metabolic process GO:0055086 316 0.027
positive regulation of phosphate metabolic process GO:0045937 262 0.027
regulation of protein metabolic process GO:0051246 289 0.026
positive regulation of cell communication GO:0010647 271 0.026
macromolecular complex subunit organization GO:0043933 339 0.026
positive regulation of catalytic activity GO:0043085 184 0.026
regulation of rna biosynthetic process GO:2001141 381 0.026
cellular response to organic cyclic compound GO:0071407 202 0.026
regulation of apoptotic process GO:0042981 335 0.026
cellular response to nitrogen compound GO:1901699 210 0.025
purine containing compound metabolic process GO:0072521 253 0.025
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.025
regulation of cellular amine metabolic process GO:0033238 8 0.025
response to estrogen GO:0043627 232 0.024
response to nutrient levels GO:0031667 370 0.024
cellular response to hormone stimulus GO:0032870 247 0.024
nucleoside phosphate metabolic process GO:0006753 283 0.024
intracellular signal transduction GO:0035556 314 0.024
cellular amine metabolic process GO:0044106 38 0.023
negative regulation of biosynthetic process GO:0009890 168 0.023
cellular catabolic process GO:0044248 295 0.023
regulation of protein modification process GO:0031399 194 0.023
cellular protein localization GO:0034613 122 0.023
cell projection organization GO:0030030 302 0.023
protein complex subunit organization GO:0071822 302 0.023
response to oxygen levels GO:0070482 265 0.022
positive regulation of cellular amine metabolic process GO:0033240 3 0.022
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.022
cellular response to lipid GO:0071396 201 0.022
protein transport GO:0015031 132 0.021
regulation of canonical wnt signaling pathway GO:0060828 4 0.021
positive regulation of rna metabolic process GO:0051254 203 0.021
response to extracellular stimulus GO:0009991 380 0.021
organic substance catabolic process GO:1901575 316 0.020
organelle organization GO:0006996 266 0.020
regulation of programmed cell death GO:0043067 341 0.020
rna biosynthetic process GO:0032774 380 0.020
positive regulation of signaling GO:0023056 270 0.020
regulation of signal transduction GO:0009966 318 0.020
positive regulation of protein metabolic process GO:0051247 178 0.020
positive regulation of gene expression GO:0010628 244 0.020
tissue development GO:0009888 252 0.020
positive regulation of cell proliferation GO:0008284 249 0.020
developmental process involved in reproduction GO:0003006 159 0.020
apoptotic process GO:0006915 381 0.020
neuron projection development GO:0031175 273 0.020
positive regulation of molecular function GO:0044093 230 0.019
response to cytokine GO:0034097 215 0.019
positive regulation of rna biosynthetic process GO:1902680 197 0.019
cellular response to stress GO:0033554 269 0.019
regulation of cell differentiation GO:0045595 320 0.019
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.019
purine ribonucleotide metabolic process GO:0009150 227 0.019
positive regulation of transcription dna templated GO:0045893 197 0.019
aging GO:0007568 241 0.019
localization of cell GO:0051674 202 0.019
macromolecular complex assembly GO:0065003 273 0.018
establishment of protein localization GO:0045184 141 0.018
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.018
wound healing GO:0042060 122 0.018
ribonucleotide metabolic process GO:0009259 231 0.018
negative regulation of gene expression GO:0010629 199 0.018
locomotion GO:0040011 237 0.018
glycosyl compound metabolic process GO:1901657 182 0.018
regulation of rna metabolic process GO:0051252 391 0.018
secretion GO:0046903 307 0.018
macromolecule localization GO:0033036 252 0.017
positive regulation of developmental process GO:0051094 283 0.017
regulation of hydrolase activity GO:0051336 143 0.017
programmed cell death GO:0012501 392 0.017
regulation of protein phosphorylation GO:0001932 183 0.017
central nervous system development GO:0007417 311 0.017
protein complex assembly GO:0006461 263 0.017
single organism intracellular transport GO:1902582 166 0.017
negative regulation of cell death GO:0060548 229 0.017
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.017
response to carbohydrate GO:0009743 183 0.017
regulation of cell proliferation GO:0042127 359 0.017
anatomical structure morphogenesis GO:0009653 298 0.017
cellular lipid metabolic process GO:0044255 208 0.017
synaptic transmission GO:0007268 235 0.017
chemical homeostasis GO:0048878 292 0.017
cell migration GO:0016477 197 0.016
positive regulation of programmed cell death GO:0043068 157 0.016
regulation of cellular localization GO:0060341 263 0.016
carbohydrate derivative biosynthetic process GO:1901137 124 0.016
negative regulation of cellular biosynthetic process GO:0031327 161 0.016
multicellular organismal reproductive process GO:0048609 233 0.016
organonitrogen compound biosynthetic process GO:1901566 167 0.016
regulation of system process GO:0044057 208 0.016
cellular component movement GO:0006928 248 0.016
positive regulation of cell death GO:0010942 184 0.016
cellular response to organonitrogen compound GO:0071417 197 0.015
positive regulation of phosphorylation GO:0042327 177 0.015
regulation of kinase activity GO:0043549 117 0.015
nucleoside phosphate biosynthetic process GO:1901293 102 0.015
nucleoside metabolic process GO:0009116 179 0.015
secretion by cell GO:0032940 248 0.015
transmembrane transport GO:0055085 412 0.015
single organism organelle organization GO:1902589 180 0.015
nucleotide metabolic process GO:0009117 279 0.015
axis specification GO:0009798 4 0.015
positive regulation of multicellular organismal process GO:0051240 387 0.015
protein complex biogenesis GO:0070271 263 0.015
reproductive structure development GO:0048608 128 0.015
cellular homeostasis GO:0019725 252 0.015
organonitrogen compound catabolic process GO:1901565 179 0.015
cell cycle GO:0007049 101 0.015
hormone secretion GO:0046879 115 0.015
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.015
response to acid chemical GO:0001101 222 0.015
positive regulation of intracellular signal transduction GO:1902533 138 0.015
reproductive process GO:0022414 372 0.015
head development GO:0060322 247 0.015
single organism reproductive process GO:0044702 297 0.015
nitrogen compound transport GO:0071705 229 0.015
small gtpase mediated signal transduction GO:0007264 36 0.015
cellular nitrogen compound catabolic process GO:0044270 163 0.014
nucleobase containing compound catabolic process GO:0034655 152 0.014
oxidation reduction process GO:0055114 304 0.014
heterocycle catabolic process GO:0046700 167 0.014
aromatic compound catabolic process GO:0019439 168 0.014
response to peptide GO:1901652 292 0.014
positive regulation of cell migration GO:0030335 96 0.014
intracellular transport GO:0046907 185 0.014
spindle organization GO:0007051 2 0.014
multicellular organism growth GO:0035264 1 0.014
negative regulation of nucleic acid templated transcription GO:1903507 117 0.014
purine nucleotide metabolic process GO:0006163 229 0.014
cellular response to peptide hormone stimulus GO:0071375 120 0.014
ribonucleoside metabolic process GO:0009119 174 0.014
ribose phosphate metabolic process GO:0019693 235 0.013
cell part morphogenesis GO:0032990 123 0.013
regulation of phosphorylation GO:0042325 248 0.013
positive regulation of nucleic acid templated transcription GO:1903508 197 0.013
nucleotide biosynthetic process GO:0009165 98 0.013
cell cell signaling GO:0007267 335 0.013
cellular response to abiotic stimulus GO:0071214 85 0.013
sexual reproduction GO:0019953 148 0.013
neuron development GO:0048666 286 0.013
peptidyl amino acid modification GO:0018193 126 0.013
cell type specific apoptotic process GO:0097285 134 0.013
response to metal ion GO:0010038 253 0.013
regulation of cellular component movement GO:0051270 150 0.013
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.013
organic cyclic compound catabolic process GO:1901361 175 0.013
reproductive system development GO:0061458 128 0.013
cellular response to external stimulus GO:0071496 118 0.013
response to external biotic stimulus GO:0043207 221 0.013
cell motility GO:0048870 202 0.013
ras protein signal transduction GO:0007265 29 0.013
negative regulation of protein metabolic process GO:0051248 114 0.013
negative regulation of cellular protein metabolic process GO:0032269 106 0.013
response to lipopolysaccharide GO:0032496 191 0.013
ion homeostasis GO:0050801 212 0.013
organophosphate biosynthetic process GO:0090407 143 0.013
response to hypoxia GO:0001666 231 0.013
response to radiation GO:0009314 137 0.013
positive regulation of response to stimulus GO:0048584 285 0.012
positive regulation of cellular protein metabolic process GO:0032270 167 0.012
anion transport GO:0006820 178 0.012
protein homooligomerization GO:0051260 91 0.012
regulation of multicellular organismal development GO:2000026 376 0.012
regulation of intracellular signal transduction GO:1902531 218 0.012
response to wounding GO:0009611 254 0.012
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.012
response to corticosteroid GO:0031960 235 0.012
positive regulation of cell differentiation GO:0045597 217 0.012
vesicle mediated transport GO:0016192 181 0.012
gamete generation GO:0007276 124 0.012
regulation of hormone levels GO:0010817 187 0.012
response to oxidative stress GO:0006979 186 0.012
positive regulation of protein modification process GO:0031401 142 0.012
negative regulation of cell communication GO:0010648 158 0.012
cytoplasmic transport GO:0016482 115 0.012
response to hexose GO:0009746 144 0.012
regulation of secretion GO:0051046 224 0.012
response to estradiol GO:0032355 164 0.012
positive regulation of signal transduction GO:0009967 175 0.012
motor neuron axon guidance GO:0008045 1 0.012
protein localization GO:0008104 191 0.012
regulation of immune system process GO:0002682 123 0.012
gonad development GO:0008406 104 0.012
regulation of transferase activity GO:0051338 123 0.012
hormone mediated signaling pathway GO:0009755 23 0.012
response to interleukin 1 GO:0070555 55 0.012
negative regulation of catalytic activity GO:0043086 103 0.012
proteolysis GO:0006508 175 0.012
transcription from rna polymerase ii promoter GO:0006366 252 0.012
regulation of locomotion GO:0040012 148 0.012
neuron death GO:0070997 127 0.012
positive regulation of cellular component movement GO:0051272 102 0.012
positive regulation of protein phosphorylation GO:0001934 135 0.011
regulation of secretion by cell GO:1903530 208 0.011
regulation of nucleotide metabolic process GO:0006140 117 0.011
cation transport GO:0006812 382 0.011
growth GO:0040007 165 0.011
regulation of neuron death GO:1901214 115 0.011
cellular response to cytokine stimulus GO:0071345 127 0.011
regulation of cell development GO:0060284 263 0.011
alpha amino acid metabolic process GO:1901605 71 0.011
negative regulation of multicellular organismal process GO:0051241 203 0.011
regulation of anatomical structure morphogenesis GO:0022603 141 0.011
defense response GO:0006952 194 0.011
neural crest cell differentiation GO:0014033 2 0.011
sex differentiation GO:0007548 113 0.011
response to peptide hormone GO:0043434 278 0.011
anterior posterior pattern specification GO:0009952 1 0.011
cytoskeleton dependent cytokinesis GO:0061640 2 0.011
purine ribonucleoside metabolic process GO:0046128 168 0.011
nucleoside triphosphate metabolic process GO:0009141 144 0.011
cellular macromolecule localization GO:0070727 122 0.011
multicellular organism reproduction GO:0032504 233 0.011
positive regulation of cellular component organization GO:0051130 200 0.011
reactive oxygen species biosynthetic process GO:1903409 8 0.011
reproduction GO:0000003 245 0.011
response to molecule of bacterial origin GO:0002237 194 0.011
cell projection morphogenesis GO:0048858 123 0.010
intracellular protein transport GO:0006886 79 0.010
positive regulation of apoptotic process GO:0043065 154 0.010
response to glucose GO:0009749 136 0.010
metal ion transport GO:0030001 289 0.010
development of primary sexual characteristics GO:0045137 107 0.010
gastrulation GO:0007369 2 0.010
multi organism reproductive process GO:0044703 262 0.010
regulation of stem cell differentiation GO:2000736 2 0.010
regulation of neuron apoptotic process GO:0043523 83 0.010
regulation of reactive oxygen species metabolic process GO:2000377 26 0.010
regulation of b cell differentiation GO:0045577 1 0.010
glycosyl compound catabolic process GO:1901658 126 0.010
cilium morphogenesis GO:0060271 2 0.010

Xpc disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
nervous system disease DOID:863 0 0.018
disease of anatomical entity DOID:7 0 0.018
disease of cellular proliferation DOID:14566 0 0.013
organ system cancer DOID:0050686 0 0.010
cancer DOID:162 0 0.010