Rattus norvegicus

0 known processes

Sf3b4

splicing factor 3b, subunit 4

Sf3b4 biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
rna metabolic process GO:0016070 406 0.283
Mouse
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.128
organelle organization GO:0006996 266 0.107
Fly
regulation of rna metabolic process GO:0051252 391 0.091
Mouse
negative regulation of metabolic process GO:0009892 331 0.078
immune system process GO:0002376 204 0.069
dna packaging GO:0006323 4 0.064
multi organism reproductive process GO:0044703 262 0.063
regulation of nucleic acid templated transcription GO:1903506 380 0.055
response to wounding GO:0009611 254 0.053
positive regulation of response to stimulus GO:0048584 285 0.053
negative regulation of biosynthetic process GO:0009890 168 0.052
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.052
chromatin assembly or disassembly GO:0006333 1 0.051
transcription from rna polymerase ii promoter GO:0006366 252 0.050
negative regulation of cellular biosynthetic process GO:0031327 161 0.046
cellular component assembly GO:0022607 360 0.045
cellular response to oxygen containing compound GO:1901701 386 0.044
positive regulation of rna metabolic process GO:0051254 203 0.043
Mouse
macromolecular complex subunit organization GO:0043933 339 0.042
Fly
negative regulation of macromolecule metabolic process GO:0010605 260 0.041
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.041
cell motility GO:0048870 202 0.041
neuron projection development GO:0031175 273 0.040
protein complex biogenesis GO:0070271 263 0.039
transcription dna templated GO:0006351 377 0.038
negative regulation of transcription dna templated GO:0045892 116 0.037
response to peptide GO:1901652 292 0.037
apoptotic process GO:0006915 381 0.036
macromolecular complex assembly GO:0065003 273 0.036
positive regulation of biosynthetic process GO:0009891 319 0.035
negative regulation of cellular metabolic process GO:0031324 281 0.034
protein complex assembly GO:0006461 263 0.034
negative regulation of rna biosynthetic process GO:1902679 118 0.034
neuron development GO:0048666 286 0.034
response to decreased oxygen levels GO:0036293 237 0.034
regulation of protein metabolic process GO:0051246 289 0.032
regulation of rna biosynthetic process GO:2001141 381 0.032
multicellular organismal reproductive process GO:0048609 233 0.032
cellular response to stress GO:0033554 269 0.032
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.031
regulation of phosphate metabolic process GO:0019220 349 0.031
regulation of transcription dna templated GO:0006355 374 0.030
negative regulation of transcription from rna polymerase ii promoter GO:0000122 75 0.030
negative regulation of nucleic acid templated transcription GO:1903507 117 0.030
positive regulation of phosphate metabolic process GO:0045937 262 0.030
single organism reproductive process GO:0044702 297 0.029
cell projection organization GO:0030030 302 0.029
anatomical structure morphogenesis GO:0009653 298 0.029
tissue development GO:0009888 252 0.028
locomotion GO:0040011 237 0.028
female pregnancy GO:0007565 122 0.028
smooth muscle cell proliferation GO:0048659 77 0.028
positive regulation of cellular protein metabolic process GO:0032270 167 0.027
histone h3 acetylation GO:0043966 2 0.027
single organism organelle organization GO:1902589 180 0.027
Fly
protein complex subunit organization GO:0071822 302 0.027
Fly
positive regulation of protein metabolic process GO:0051247 178 0.026
cellular component biogenesis GO:0044085 368 0.026
negative regulation of gene expression GO:0010629 199 0.026
neuron differentiation GO:0030182 368 0.025
reproductive process GO:0022414 372 0.025
cellular chemical homeostasis GO:0055082 247 0.025
homeostatic process GO:0042592 331 0.025
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.025
ras protein signal transduction GO:0007265 29 0.025
response to peptide hormone GO:0043434 278 0.025
positive regulation of rna biosynthetic process GO:1902680 197 0.025
defense response GO:0006952 194 0.025
sexual reproduction GO:0019953 148 0.024
rna biosynthetic process GO:0032774 380 0.024
response to oxygen levels GO:0070482 265 0.024
cellular response to endogenous stimulus GO:0071495 377 0.024
regulation of cellular ketone metabolic process GO:0010565 27 0.024
positive regulation of nucleic acid templated transcription GO:1903508 197 0.023
neurological system process GO:0050877 219 0.023
regulation of cell motility GO:2000145 131 0.023
negative regulation of rna metabolic process GO:0051253 123 0.023
protein oligomerization GO:0051259 191 0.023
negative regulation of rna splicing GO:0033119 3 0.023
nucleic acid templated transcription GO:0097659 379 0.023
response to ionizing radiation GO:0010212 59 0.023
positive regulation of cellular biosynthetic process GO:0031328 295 0.023
chemical homeostasis GO:0048878 292 0.023
response to hypoxia GO:0001666 231 0.023
regulation of cell proliferation GO:0042127 359 0.023
regulation of cellular localization GO:0060341 263 0.023
regulation of phosphorus metabolic process GO:0051174 349 0.022
positive regulation of phosphorus metabolic process GO:0010562 262 0.022
positive regulation of protein kinase activity GO:0045860 73 0.022
cellular response to cytokine stimulus GO:0071345 127 0.022
positive regulation of transport GO:0051050 245 0.022
response to temperature stimulus GO:0009266 94 0.022
amine metabolic process GO:0009308 38 0.021
positive regulation of phosphorylation GO:0042327 177 0.021
positive regulation of cell communication GO:0010647 271 0.021
positive regulation of cell proliferation GO:0008284 249 0.021
cellular homeostasis GO:0019725 252 0.021
response to nutrient levels GO:0031667 370 0.020
cellular component movement GO:0006928 248 0.020
regulation of apoptotic process GO:0042981 335 0.020
response to metal ion GO:0010038 253 0.020
response to inorganic substance GO:0010035 377 0.020
innate immune response GO:0045087 35 0.019
carboxylic acid metabolic process GO:0019752 289 0.019
response to corticosteroid GO:0031960 235 0.019
protein phosphorylation GO:0006468 345 0.019
regulation of signal transduction GO:0009966 318 0.019
cellular ketone metabolic process GO:0042180 51 0.019
cellular amine metabolic process GO:0044106 38 0.019
multicellular organism reproduction GO:0032504 233 0.019
regulation of protein import into nucleus GO:0042306 24 0.019
regulation of cellular amino acid metabolic process GO:0006521 2 0.019
synaptic transmission GO:0007268 235 0.019
response to heat GO:0009408 60 0.019
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.019
Mouse
growth GO:0040007 165 0.018
single organism intracellular transport GO:1902582 166 0.018
regulation of phosphorylation GO:0042325 248 0.018
positive regulation of transcription factor import into nucleus GO:0042993 4 0.018
regulation of programmed cell death GO:0043067 341 0.018
small gtpase mediated signal transduction GO:0007264 36 0.018
chromosome organization GO:0051276 36 0.018
positive regulation of protein modification process GO:0031401 142 0.018
response to radiation GO:0009314 137 0.018
positive regulation of transferase activity GO:0051347 81 0.017
dna metabolic process GO:0006259 96 0.017
peptidyl amino acid modification GO:0018193 126 0.017
aging GO:0007568 241 0.017
axis specification GO:0009798 4 0.017
central nervous system development GO:0007417 311 0.017
response to cytokine GO:0034097 215 0.017
fertilization GO:0009566 3 0.017
intracellular protein transport GO:0006886 79 0.016
regulation of cellular protein metabolic process GO:0032268 267 0.016
regulation of molecular function GO:0065009 398 0.016
negative regulation of viral process GO:0048525 4 0.016
vesicle mediated transport GO:0016192 181 0.016
regulation of catalytic activity GO:0050790 304 0.016
inflammatory response GO:0006954 150 0.016
positive regulation of protein phosphorylation GO:0001934 135 0.016
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.016
Mouse
cellular response to nitrogen compound GO:1901699 210 0.015
positive regulation of apoptotic process GO:0043065 154 0.015
regulation of response to stress GO:0080134 126 0.015
intracellular transport GO:0046907 185 0.015
cellular response to biotic stimulus GO:0071216 59 0.015
developmental growth GO:0048589 100 0.015
developmental growth involved in morphogenesis GO:0060560 33 0.015
positive regulation of catalytic activity GO:0043085 184 0.015
regulation of cell differentiation GO:0045595 320 0.015
positive regulation of transcription dna templated GO:0045893 197 0.015
axis elongation GO:0003401 2 0.015
rhythmic process GO:0048511 156 0.015
cellular amino acid metabolic process GO:0006520 107 0.015
ion homeostasis GO:0050801 212 0.015
response to oxidative stress GO:0006979 186 0.015
regulation of cell development GO:0060284 263 0.015
cytoplasmic transport GO:0016482 115 0.015
spermatogenesis GO:0007283 99 0.015
multi multicellular organism process GO:0044706 138 0.015
positive regulation of cellular amino acid metabolic process GO:0045764 1 0.015
positive regulation of signaling GO:0023056 270 0.015
negative regulation of cell differentiation GO:0045596 99 0.015
positive regulation of intracellular signal transduction GO:1902533 138 0.014
negative regulation of developmental process GO:0051093 125 0.014
nucleobase containing small molecule metabolic process GO:0055086 316 0.014
reproduction GO:0000003 245 0.014
secretion GO:0046903 307 0.014
cytoskeleton organization GO:0007010 111 0.014
Fly
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.014
cell part morphogenesis GO:0032990 123 0.014
response to acid chemical GO:0001101 222 0.014
positive regulation of kinase activity GO:0033674 77 0.014
cellular response to organic cyclic compound GO:0071407 202 0.014
regulation of cellular component movement GO:0051270 150 0.014
negative regulation of multicellular organismal process GO:0051241 203 0.013
leukocyte activation GO:0045321 76 0.013
positive regulation of cellular amine metabolic process GO:0033240 3 0.013
positive regulation of mapk cascade GO:0043410 92 0.013
activation of protein kinase activity GO:0032147 47 0.013
regulation of smooth muscle cell proliferation GO:0048660 75 0.013
regulation of protein serine threonine kinase activity GO:0071900 64 0.013
regulation of cellular component organization GO:0051128 368 0.013
response to glucose GO:0009749 136 0.013
positive regulation of programmed cell death GO:0043068 157 0.013
cytoskeleton dependent cytokinesis GO:0061640 2 0.013
cell cycle checkpoint GO:0000075 2 0.013
regulation of transferase activity GO:0051338 123 0.013
organ morphogenesis GO:0009887 75 0.013
regulation of establishment of protein localization GO:0070201 69 0.013
macromolecule localization GO:0033036 252 0.013
response to biotic stimulus GO:0009607 226 0.013
anterior posterior pattern specification GO:0009952 1 0.013
regulation of cell migration GO:0030334 128 0.013
cell projection morphogenesis GO:0048858 123 0.013
regulation of dna metabolic process GO:0051052 60 0.012
cellular response to growth factor stimulus GO:0071363 162 0.012
intrinsic apoptotic signaling pathway in response to dna damage GO:0008630 1 0.012
regulation of multicellular organismal development GO:2000026 376 0.012
protein transport GO:0015031 132 0.012
regulation of intracellular signal transduction GO:1902531 218 0.012
regulation of protein transport GO:0051223 68 0.012
positive regulation of nervous system development GO:0051962 178 0.012
male gamete generation GO:0048232 99 0.012
feeding behavior GO:0007631 53 0.012
positive regulation of cell death GO:0010942 184 0.012
response to extracellular stimulus GO:0009991 380 0.012
negative regulation of nervous system development GO:0051961 79 0.012
cell morphogenesis GO:0000902 142 0.012
heart morphogenesis GO:0003007 3 0.012
ribose phosphate metabolic process GO:0019693 235 0.012
negative regulation of cell development GO:0010721 82 0.012
single fertilization GO:0007338 3 0.012
response to estrogen GO:0043627 232 0.012
cell morphogenesis involved in neuron differentiation GO:0048667 106 0.012
covalent chromatin modification GO:0016569 30 0.012
dendrite development GO:0016358 72 0.012
carbohydrate derivative metabolic process GO:1901135 346 0.012
immune response GO:0006955 104 0.012
lipid metabolic process GO:0006629 283 0.012
response to ethanol GO:0045471 162 0.012
cellular response to oxygen levels GO:0071453 60 0.012
response to amino acid GO:0043200 75 0.011
negative regulation of cell death GO:0060548 229 0.011
ovulation cycle GO:0042698 67 0.011
response to glucocorticoid GO:0051384 223 0.011
eye morphogenesis GO:0048592 4 0.011
regulation of growth GO:0040008 105 0.011
intracellular signal transduction GO:0035556 314 0.011
muscle cell proliferation GO:0033002 84 0.011
programmed cell death GO:0012501 392 0.011
rna localization GO:0006403 4 0.011
embryo development GO:0009790 49 0.011
calcium ion homeostasis GO:0055074 162 0.011
behavior GO:0007610 205 0.011
cellular response to abiotic stimulus GO:0071214 85 0.011
positive regulation of cell differentiation GO:0045597 217 0.011
positive regulation of developmental process GO:0051094 283 0.011
oxoacid metabolic process GO:0043436 290 0.011
meiotic cell cycle process GO:1903046 3 0.011
cellular response to organonitrogen compound GO:0071417 197 0.011
regulation of intracellular transport GO:0032386 65 0.010
regulation of alternative mrna splicing via spliceosome GO:0000381 2 0.010
regulation of neurogenesis GO:0050767 247 0.010
brain development GO:0007420 247 0.010
cellular cation homeostasis GO:0030003 180 0.010
cellular component morphogenesis GO:0032989 155 0.010
response to estradiol GO:0032355 164 0.010
histone modification GO:0016570 30 0.010
multicellular organism growth GO:0035264 1 0.010
negative regulation of cell communication GO:0010648 158 0.010
chromatin modification GO:0016568 33 0.010
positive regulation of gene expression GO:0010628 244 0.010
Mouse
regulation of cellular amine metabolic process GO:0033238 8 0.010

Sf3b4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
gastrointestinal system cancer DOID:3119 0 0.032
cancer DOID:162 0 0.032
disease of cellular proliferation DOID:14566 0 0.032
organ system cancer DOID:0050686 0 0.032
liver cancer DOID:3571 0 0.032
hepatocellular carcinoma DOID:684 0 0.026
liver carcinoma DOID:686 0 0.026
large intestine cancer DOID:5672 0 0.022
colon cancer DOID:219 0 0.022
intestinal cancer DOID:10155 0 0.022
colorectal cancer DOID:9256 0 0.022
endocrine gland cancer DOID:170 0 0.013
benign neoplasm DOID:0060072 0 0.013
breast cancer DOID:1612 0 0.012
thoracic cancer DOID:5093 0 0.012
disease of anatomical entity DOID:7 0 0.011
nervous system disease DOID:863 0 0.011