Rattus norvegicus

14 known processes

Clph

casein-like phosphoprotein

(Aliases: Cabs1,MGC94008,Rsd6)

Clph biological process predictions


Filter by process size:
Biological process GO term ID Process size Probability Func Analog Org
regulation of cellular component movement GO:0051270 150 0.277
rna metabolic process GO:0016070 406 0.248
regulation of rna metabolic process GO:0051252 391 0.239
regulation of transcription dna templated GO:0006355 374 0.209
localization of cell GO:0051674 202 0.202
locomotion GO:0040011 237 0.169
cell motility GO:0048870 202 0.150
positive regulation of biosynthetic process GO:0009891 319 0.145
positive regulation of phosphorus metabolic process GO:0010562 262 0.139
regulation of rna biosynthetic process GO:2001141 381 0.139
regulation of programmed cell death GO:0043067 341 0.121
tissue development GO:0009888 252 0.116
regulation of ion transport GO:0043269 245 0.111
response to extracellular stimulus GO:0009991 380 0.109
nucleotide biosynthetic process GO:0009165 98 0.102
regulation of nucleic acid templated transcription GO:1903506 380 0.097
rna biosynthetic process GO:0032774 380 0.096
positive regulation of multicellular organismal process GO:0051240 387 0.093
circulatory system development GO:0072359 134 0.092
regulation of phosphorylation GO:0042325 248 0.091
regulation of molecular function GO:0065009 398 0.090
positive regulation of gene expression GO:0010628 244 0.089
positive regulation of intracellular signal transduction GO:1902533 138 0.088
positive regulation of apoptotic process GO:0043065 154 0.086
regulation of intracellular signal transduction GO:1902531 218 0.082
positive regulation of phosphorylation GO:0042327 177 0.081
positive regulation of catalytic activity GO:0043085 184 0.080
positive regulation of nucleobase containing compound metabolic process GO:0045935 319 0.079
nucleic acid templated transcription GO:0097659 379 0.077
positive regulation of nitrogen compound metabolic process GO:0051173 334 0.077
regulation of transcription from rna polymerase ii promoter GO:0006357 234 0.076
programmed cell death GO:0012501 392 0.073
tube development GO:0035295 89 0.071
regulation of signal transduction GO:0009966 318 0.071
positive regulation of phosphate metabolic process GO:0045937 262 0.070
positive regulation of cell proliferation GO:0008284 249 0.069
positive regulation of cellular biosynthetic process GO:0031328 295 0.069
response to hypoxia GO:0001666 231 0.068
glutamate receptor signaling pathway GO:0007215 43 0.068
response to nutrient levels GO:0031667 370 0.068
steroid biosynthetic process GO:0006694 48 0.068
transcription dna templated GO:0006351 377 0.068
response to lipopolysaccharide GO:0032496 191 0.066
transcription from rna polymerase ii promoter GO:0006366 252 0.065
regulation of apoptotic process GO:0042981 335 0.064
regulation of ossification GO:0030278 32 0.063
regulation of phosphorus metabolic process GO:0051174 349 0.062
positive regulation of macromolecule biosynthetic process GO:0010557 247 0.061
positive regulation of signal transduction GO:0009967 175 0.061
positive regulation of molecular function GO:0044093 230 0.061
positive regulation of protein metabolic process GO:0051247 178 0.058
cellular cation homeostasis GO:0030003 180 0.058
negative regulation of cellular metabolic process GO:0031324 281 0.057
positive regulation of signaling GO:0023056 270 0.057
organ morphogenesis GO:0009887 75 0.057
response to estrogen GO:0043627 232 0.056
reproductive process GO:0022414 372 0.056
activation of janus kinase activity GO:0042976 5 0.055
cell migration GO:0016477 197 0.053
response to other organism GO:0051707 220 0.053
response to cytokine GO:0034097 215 0.052
single organism biosynthetic process GO:0044711 342 0.051
positive regulation of response to stimulus GO:0048584 285 0.050
positive regulation of cell communication GO:0010647 271 0.050
central nervous system development GO:0007417 311 0.050
urinary bladder smooth muscle contraction GO:0014832 4 0.047
cation homeostasis GO:0055080 195 0.047
positive regulation of transport GO:0051050 245 0.046
regulation of catalytic activity GO:0050790 304 0.046
defense response GO:0006952 194 0.046
response to estradiol GO:0032355 164 0.045
regulation of multicellular organismal development GO:2000026 376 0.044
negative regulation of metabolic process GO:0009892 331 0.044
regulation of cell differentiation GO:0045595 320 0.044
regulation of cell migration GO:0030334 128 0.043
protein phosphorylation GO:0006468 345 0.042
negative regulation of nucleic acid templated transcription GO:1903507 117 0.042
regeneration GO:0031099 163 0.042
response to corticosteroid GO:0031960 235 0.041
negative regulation of cell death GO:0060548 229 0.040
sex differentiation GO:0007548 113 0.040
regulation of lipid metabolic process GO:0019216 68 0.039
steroid metabolic process GO:0008202 73 0.039
regulation of cellular protein metabolic process GO:0032268 267 0.038
macromolecular complex subunit organization GO:0043933 339 0.038
single organism reproductive process GO:0044702 297 0.037
metal ion homeostasis GO:0055065 186 0.037
regulation of neurogenesis GO:0050767 247 0.036
response to nutrient GO:0007584 248 0.036
peptidyl amino acid modification GO:0018193 126 0.036
jak stat cascade GO:0007259 26 0.036
regulation of immune system process GO:0002682 123 0.036
response to biotic stimulus GO:0009607 226 0.035
regulation of epithelial cell proliferation GO:0050678 49 0.035
positive regulation of transcription dna templated GO:0045893 197 0.034
cation transport GO:0006812 382 0.034
regulation of mapk cascade GO:0043408 116 0.034
positive regulation of lipid metabolic process GO:0045834 33 0.034
protein complex subunit organization GO:0071822 302 0.034
nitrogen compound transport GO:0071705 229 0.033
apoptotic process GO:0006915 381 0.033
response to metal ion GO:0010038 253 0.033
salivary gland development GO:0007431 3 0.033
reproductive system development GO:0061458 128 0.032
inflammatory response GO:0006954 150 0.032
cellular component movement GO:0006928 248 0.032
nucleoside phosphate biosynthetic process GO:1901293 102 0.032
nucleoside phosphate metabolic process GO:0006753 283 0.032
regulation of nervous system development GO:0051960 264 0.031
negative regulation of programmed cell death GO:0043069 183 0.031
positive regulation of developmental process GO:0051094 283 0.031
ion homeostasis GO:0050801 212 0.030
response to molecule of bacterial origin GO:0002237 194 0.030
divalent inorganic cation homeostasis GO:0072507 165 0.030
positive regulation of cell differentiation GO:0045597 217 0.030
cytosolic calcium ion homeostasis GO:0051480 140 0.030
negative regulation of gene expression GO:0010629 199 0.030
regulation of locomotion GO:0040012 148 0.030
positive regulation of cytosolic calcium ion concentration GO:0007204 122 0.030
chemical homeostasis GO:0048878 292 0.029
regulation of cell motility GO:2000145 131 0.029
regulation of saliva secretion GO:0046877 3 0.029
positive regulation of neurogenesis GO:0050769 165 0.029
response to vitamin GO:0033273 131 0.029
mapk cascade GO:0000165 140 0.028
positive regulation of protein modification process GO:0031401 142 0.028
negative regulation of nitrogen compound metabolic process GO:0051172 161 0.028
regulation of phosphate metabolic process GO:0019220 349 0.028
oxoacid metabolic process GO:0043436 290 0.028
cellular chemical homeostasis GO:0055082 247 0.028
positive regulation of programmed cell death GO:0043068 157 0.027
signal transduction by phosphorylation GO:0023014 144 0.027
peptidyl tyrosine phosphorylation GO:0018108 72 0.027
positive regulation of saliva secretion GO:0046878 3 0.027
metal ion transport GO:0030001 289 0.027
protein oligomerization GO:0051259 191 0.026
lipid biosynthetic process GO:0008610 128 0.026
neuron development GO:0048666 286 0.026
hormone metabolic process GO:0042445 69 0.026
multi multicellular organism process GO:0044706 138 0.026
growth GO:0040007 165 0.026
positive regulation of protein phosphorylation GO:0001934 135 0.026
cellular response to hormone stimulus GO:0032870 247 0.026
response to bacterium GO:0009617 200 0.026
regulation of systemic arterial blood pressure by norepinephrine epinephrine GO:0001993 2 0.025
cardiovascular system development GO:0072358 134 0.025
homeostatic process GO:0042592 331 0.025
regulation of neuron death GO:1901214 115 0.025
transmembrane transport GO:0055085 412 0.025
regulation of protein phosphorylation GO:0001932 183 0.025
regulation of ion transmembrane transport GO:0034765 121 0.024
carbohydrate derivative biosynthetic process GO:1901137 124 0.024
muscle cell proliferation GO:0033002 84 0.024
response to molecule of fungal origin GO:0002238 3 0.024
multicellular organism reproduction GO:0032504 233 0.024
negative regulation of nucleobase containing compound metabolic process GO:0045934 153 0.024
regulation of cell development GO:0060284 263 0.024
fertilization GO:0009566 3 0.024
negative regulation of rna metabolic process GO:0051253 123 0.024
negative regulation of macromolecule metabolic process GO:0010605 260 0.024
cellular response to lipid GO:0071396 201 0.023
cellular divalent inorganic cation homeostasis GO:0072503 162 0.023
regulation of lipid biosynthetic process GO:0046890 38 0.023
wound healing GO:0042060 122 0.023
regulation of developmental growth GO:0048638 45 0.023
regulation of jak stat cascade GO:0046425 21 0.023
ossification GO:0001503 70 0.023
ribose phosphate biosynthetic process GO:0046390 87 0.023
regulation of metal ion transport GO:0010959 118 0.023
negative regulation of cellular macromolecule biosynthetic process GO:2000113 141 0.023
gonad development GO:0008406 104 0.023
purine nucleotide biosynthetic process GO:0006164 83 0.022
epithelial cell proliferation GO:0050673 54 0.022
protein complex biogenesis GO:0070271 263 0.022
oligopeptide transport GO:0006857 4 0.022
ribonucleotide biosynthetic process GO:0009260 85 0.021
positive regulation of cell death GO:0010942 184 0.021
positive regulation of kinase activity GO:0033674 77 0.021
regulation of hydrolase activity GO:0051336 143 0.021
reactive oxygen species metabolic process GO:0072593 37 0.021
lung development GO:0030324 43 0.021
macromolecular complex assembly GO:0065003 273 0.020
lipid metabolic process GO:0006629 283 0.020
cellular metal ion homeostasis GO:0006875 172 0.020
positive regulation of cellular protein metabolic process GO:0032270 167 0.020
positive regulation of purine nucleotide biosynthetic process GO:1900373 36 0.020
negative regulation of rna biosynthetic process GO:1902679 118 0.020
negative regulation of cellular biosynthetic process GO:0031327 161 0.020
negative regulation of macromolecule biosynthetic process GO:0010558 148 0.020
cellular response to growth factor stimulus GO:0071363 162 0.020
response to decreased oxygen levels GO:0036293 237 0.020
development of primary sexual characteristics GO:0045137 107 0.020
cation transmembrane transport GO:0098655 263 0.019
positive regulation of cell development GO:0010720 176 0.019
positive regulation of nervous system development GO:0051962 178 0.019
nucleobase containing small molecule metabolic process GO:0055086 316 0.019
cell adhesion GO:0007155 110 0.019
regulation of transferase activity GO:0051338 123 0.019
negative regulation of biosynthetic process GO:0009890 168 0.019
regulation of response to stress GO:0080134 126 0.019
sensory perception GO:0007600 101 0.019
saliva secretion GO:0046541 3 0.019
single organism catabolic process GO:0044712 283 0.019
g protein coupled receptor signaling pathway GO:0007186 242 0.019
regulation of neurological system process GO:0031644 43 0.019
purine nucleotide metabolic process GO:0006163 229 0.019
response to glucocorticoid GO:0051384 223 0.019
negative regulation of transcription dna templated GO:0045892 116 0.019
cellular homeostasis GO:0019725 252 0.018
respiratory system development GO:0060541 45 0.018
regulation of protein metabolic process GO:0051246 289 0.018
divalent metal ion transport GO:0070838 132 0.018
positive regulation of cellular component movement GO:0051272 102 0.018
regulation of cell proliferation GO:0042127 359 0.018
regulation of growth GO:0040008 105 0.018
regulation of canonical wnt signaling pathway GO:0060828 4 0.017
regulation of system process GO:0044057 208 0.017
carbohydrate derivative metabolic process GO:1901135 346 0.017
cellular calcium ion homeostasis GO:0006874 160 0.017
regulation of protein modification process GO:0031399 194 0.017
regulation of muscle system process GO:0090257 79 0.017
positive regulation of nucleic acid templated transcription GO:1903508 197 0.017
gland development GO:0048732 155 0.017
calcium ion transport GO:0006816 131 0.017
positive regulation of rna biosynthetic process GO:1902680 197 0.017
positive regulation of protein kinase activity GO:0045860 73 0.017
negative regulation of neuron death GO:1901215 69 0.017
cellular amino acid metabolic process GO:0006520 107 0.017
anatomical structure morphogenesis GO:0009653 298 0.017
response to peptide GO:1901652 292 0.017
spermatogenesis GO:0007283 99 0.016
positive regulation of hydrolase activity GO:0051345 86 0.016
regulation of purine nucleotide biosynthetic process GO:1900371 46 0.016
negative regulation of developmental process GO:0051093 125 0.016
nucleotide metabolic process GO:0009117 279 0.016
cellular response to oxygen containing compound GO:1901701 386 0.016
response to external biotic stimulus GO:0043207 221 0.016
positive regulation of rna metabolic process GO:0051254 203 0.015
regulation of homotypic cell cell adhesion GO:0034110 4 0.015
organic acid transport GO:0015849 116 0.015
defecation GO:0030421 1 0.015
organic acid metabolic process GO:0006082 292 0.015
regulation of cellular amino acid metabolic process GO:0006521 2 0.015
positive regulation of cyclic nucleotide metabolic process GO:0030801 37 0.015
male gonad development GO:0008584 59 0.015
positive regulation of transferase activity GO:0051347 81 0.015
response to inorganic substance GO:0010035 377 0.015
purine ribonucleotide biosynthetic process GO:0009152 81 0.015
regulation of cellular component organization GO:0051128 368 0.015
regulation of nucleotide metabolic process GO:0006140 117 0.015
synaptic transmission GO:0007268 235 0.015
positive regulation of cell motility GO:2000147 97 0.015
response to ammonium ion GO:0060359 71 0.015
cellular response to endogenous stimulus GO:0071495 377 0.015
positive regulation of cellular component organization GO:0051130 200 0.014
regulation of calcium ion transport GO:0051924 77 0.014
hepaticobiliary system development GO:0061008 90 0.014
smooth muscle cell proliferation GO:0048659 77 0.014
positive regulation of myeloid leukocyte differentiation GO:0002763 7 0.014
regulation of kinase activity GO:0043549 117 0.014
neurological system process GO:0050877 219 0.014
purine ribonucleoside triphosphate catabolic process GO:0009207 122 0.014
carboxylic acid metabolic process GO:0019752 289 0.014
regulation of muscle contraction GO:0006937 53 0.014
regulation of cell fate commitment GO:0010453 1 0.013
response to growth factor GO:0070848 189 0.013
cellular ketone metabolic process GO:0042180 51 0.013
glycosyl compound metabolic process GO:1901657 182 0.013
positive regulation of transcription from rna polymerase ii promoter GO:0045944 148 0.013
reactive oxygen species biosynthetic process GO:1903409 8 0.013
purine containing compound metabolic process GO:0072521 253 0.013
positive regulation of mapk cascade GO:0043410 92 0.013
neuron projection development GO:0031175 273 0.013
tissue remodeling GO:0048771 40 0.013
regulation of cyclic nucleotide biosynthetic process GO:0030802 45 0.013
germ cell migration GO:0008354 1 0.013
cyclic nucleotide metabolic process GO:0009187 80 0.013
developmental growth GO:0048589 100 0.013
brain development GO:0007420 247 0.013
negative regulation of uterine smooth muscle contraction GO:0070473 2 0.013
intracellular signal transduction GO:0035556 314 0.012
regulation of purine nucleotide metabolic process GO:1900542 115 0.012
blood circulation GO:0008015 183 0.012
response to alkaloid GO:0043279 132 0.012
head development GO:0060322 247 0.012
cellular component assembly GO:0022607 360 0.012
response to oxygen levels GO:0070482 265 0.012
urogenital system development GO:0001655 78 0.012
protein complex assembly GO:0006461 263 0.012
positive regulation of nucleotide metabolic process GO:0045981 91 0.012
positive regulation of lipid biosynthetic process GO:0046889 25 0.012
regulation of reactive oxygen species biosynthetic process GO:1903426 5 0.012
protein tetramerization GO:0051262 38 0.012
small gtpase mediated signal transduction GO:0007264 36 0.012
cellular amine metabolic process GO:0044106 38 0.012
positive regulation of homeostatic process GO:0032846 49 0.012
response to radiation GO:0009314 137 0.012
catabolic process GO:0009056 351 0.012
regulation of homeostatic process GO:0032844 101 0.012
cellular response to external stimulus GO:0071496 118 0.012
purine containing compound biosynthetic process GO:0072522 85 0.012
regulation of reactive oxygen species metabolic process GO:2000377 26 0.011
developmental process involved in reproduction GO:0003006 159 0.011
eye morphogenesis GO:0048592 4 0.011
cytokine production GO:0001816 61 0.011
immune response GO:0006955 104 0.011
amine metabolic process GO:0009308 38 0.011
organic cyclic compound catabolic process GO:1901361 175 0.011
regulation of protein kinase activity GO:0045859 105 0.011
response to activity GO:0014823 73 0.011
organ growth GO:0035265 24 0.011
cellular response to stress GO:0033554 269 0.011
organ formation GO:0048645 3 0.011
amino acid transport GO:0006865 70 0.011
neuron death GO:0070997 127 0.011
phospholipase c activating serotonin receptor signaling pathway GO:0007208 2 0.011
heart development GO:0007507 72 0.011
drug transmembrane transport GO:0006855 13 0.011
glandular epithelial cell differentiation GO:0002067 4 0.011
involuntary skeletal muscle contraction GO:0003011 2 0.011
response to wounding GO:0009611 254 0.011
micturition GO:0060073 4 0.011
camera type eye morphogenesis GO:0048593 2 0.010
immune system process GO:0002376 204 0.010
female pregnancy GO:0007565 122 0.010
carnitine transport GO:0015879 1 0.010
purine ribonucleotide metabolic process GO:0009150 227 0.010
organ regeneration GO:0031100 101 0.010
immune effector process GO:0002252 53 0.010
transmission of nerve impulse GO:0019226 42 0.010
tripeptide transport GO:0042939 2 0.010
limb morphogenesis GO:0035108 4 0.010
epithelium development GO:0060429 96 0.010

Clph disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in rat and predicted with the rat functional network.

Disease DO term ID Size Probability Func Analog Org
disease of anatomical entity DOID:7 0 0.032
musculoskeletal system disease DOID:17 0 0.032
connective tissue disease DOID:65 0 0.032
nervous system disease DOID:863 0 0.027
sensory system disease DOID:0050155 0 0.011
eye and adnexa disease DOID:1492 0 0.011
eye disease DOID:5614 0 0.011